RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 PLP1P60201 277 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 OR5A1Q8NGJ0 315 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 C18orf32Q8TCD1 76 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 NPVFQ9HCQ7 196 aa15.24■□□□□ 0.03
COL4A3BP-201ENST00000261415 DLX6P56179 175 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 BEX4Q9NWD9 120 aaPredicted RBP15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 ARL2-SNX15V9GYD0 113 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 NAV2Q8IVL1 2488 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 IGHV4-30-2A0A087WSY4 118 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 SCO2A0A1W2PP80 73 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 RAB9AP51151 201 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 LMO4P61968 165 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 TNXAQ16473 311 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 TMEM30BQ3MIR4 351 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 UTF1Q5T230 341 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 OR51H1Q8NH63 302 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 MS4A6AQ9H2W1 248 aa15.23■□□□□ 0.03
COL4A3BP-201ENST00000261415 C9orf118A6NHY6 69 aa15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 GATA2P23769 480 aaPredicted RBP15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 DSCR9P59020 149 aa15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 VWC2Q2TAL6 325 aa15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 FAM162BQ5T6X4 162 aa15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 ST6GALNAC6Q969X2 333 aa15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 PMCHL2Q9BQD1 86 aa15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 IGHV3-7P01780 117 aa15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 DEFB113Q30KQ7 82 aa15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 MTURNQ8N3F0 131 aa15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 LY6G5BQ8NDX9 201 aa15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 LEAP2Q969E1 77 aa15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 EAF1Q96JC9 268 aaPredicted RBP15.22■□□□□ 0.03
COL4A3BP-201ENST00000261415 UNC79Q9P2D8 2635 aa15.21■□□□□ 0.03
COL4A3BP-201ENST00000261415 SERTM2A0A1B0GWG4 89 aa15.21■□□□□ 0.03
COL4A3BP-201ENST00000261415 H3BRM9 83 aa15.21■□□□□ 0.03
COL4A3BP-201ENST00000261415 GPR183P32249 361 aa15.21■□□□□ 0.03
COL4A3BP-201ENST00000261415 RASL11AQ6T310 242 aa15.21■□□□□ 0.03
COL4A3BP-201ENST00000261415 FNDC4Q9H6D8 234 aaPredicted RBP15.21■□□□□ 0.03
COL4A3BP-201ENST00000261415 SCRT2Q9NQ03 307 aa15.21■□□□□ 0.03
COL4A3BP-201ENST00000261415 IGHV4-61A0A0C4DH41 118 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 IGKV1-39P01597 117 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 IGKV1-5P01602 117 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 IGLV2-14P01704 120 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 IGKV1D-39P04432 117 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 CRYBA4P53673 196 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 CKS1BP61024 79 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 SMAGPQ0VAQ4 97 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 KLF5Q13887 457 aaPredicted RBP15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 OR2D2Q9H210 308 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 KCNS2Q9ULS6 477 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 C17orf98A8MV24 154 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 CXorf1O96002 111 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 LIPFP07098 398 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 ZFP36P26651 326 aaKnown RBP15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 ZNF134P52741 427 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 OR2K2Q8NGT1 345 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 C11orf52Q96A22 123 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 TMEM191AQ9H0A3 160 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 ITPR2Q14571 2701 aa15.2■□□□□ 0.02
COL4A3BP-201ENST00000261415 TCTEX1D4Q5JR98 221 aa15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 LRRC75A-AS1Q8N1F1 130 aa15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 NPFFR1Q9GZQ6 430 aa15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 GTSF1LQ9H1H1 148 aa15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 OSTCQ9NRP0 149 aa15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 HECTD1Q9ULT8 2610 aa15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 A6NDN8 102 aa15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 IGHV1-8P0DP01 117 aa15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 HSD52Q0P140 79 aa15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 ZNF645Q8N7E2 425 aa15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 STXBP6Q8NFX7 210 aa15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 ZNF331Q9NQX6 463 aaPredicted RBP15.19■□□□□ 0.02
COL4A3BP-201ENST00000261415 TRAV26-1A0A087WT03 109 aa15.18■□□□□ 0.02
COL4A3BP-201ENST00000261415 DRAM1Q8N682 238 aa15.18■□□□□ 0.02
COL4A3BP-201ENST00000261415 MBD6Q96DN6 1003 aa15.18■□□□□ 0.02
COL4A3BP-201ENST00000261415 CR1P17927 2039 aa15.18■□□□□ 0.02
COL4A3BP-201ENST00000261415 PMS2P5A8MQ11 134 aa15.18■□□□□ 0.02
COL4A3BP-201ENST00000261415 CT45A1Q5HYN5 189 aa15.18■□□□□ 0.02
COL4A3BP-201ENST00000261415 CT45A3Q8NHU0 189 aa15.18■□□□□ 0.02
COL4A3BP-201ENST00000261415 LIN7CQ9NUP9 197 aaKnown RBP15.18■□□□□ 0.02
COL4A3BP-201ENST00000261415 ONECUT1Q9UBC0 465 aa15.18■□□□□ 0.02
COL4A3BP-201ENST00000261415 SPINK4O60575 86 aa15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 RBP4P02753 201 aa15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 CD300EQ496F6 205 aaPredicted RBP15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 IFI27L2Q9H2X8 130 aa15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 PDZD2O15018 2839 aa15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 PSMB11A5LHX3 300 aa15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 TMEM189A5PLL7 270 aa15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 STAG3L2P0CL84 134 aa15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 SLC25A16P16260 332 aa15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 WIPF2Q8TF74 440 aaPredicted RBP15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 C5orf30Q96GV9 206 aa15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 TNFRSF19Q9NS68 423 aa15.17■□□□□ 0.02
COL4A3BP-201ENST00000261415 CSMD1Q96PZ7 3565 aa15.16■□□□□ 0.02
COL4A3BP-201ENST00000261415 USF1P22415 310 aaPredicted RBP15.16■□□□□ 0.02
COL4A3BP-201ENST00000261415 HTR1DP28221 377 aa15.16■□□□□ 0.02
COL4A3BP-201ENST00000261415 A0A087X0K7 114 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 SMIM27A0A1W2PRY6 76 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 ENSAO43768 121 aaKnown RBP15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 FOXH1O75593 365 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 ARL14EPLP0DKL9 152 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 DEFA4P12838 97 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 GPR12P47775 334 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms