RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SLC25A5P05141 298 aaKnown RBP18.25■□□□□ 0.51
MSX2-201ENST00000239243 HIST1H2BJP06899 126 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 HIST1H2BOP23527 126 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 HIST1H2BBP33778 126 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 HIST1H2BDP58876 126 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 HIST1H2BCP62807 126 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 HIST2H2BEQ16778 126 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.25■□□□□ 0.51
MSX2-201ENST00000239243 C5orf17Q8NAS9 161 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 HIST1H2BHQ93079 126 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 HIST1H2BNQ99877 126 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 HIST1H2BMQ99879 126 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 S4R3C0 116 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 ABCA1O95477 2261 aa18.24■□□□□ 0.51
MSX2-201ENST00000239243 A0A0U1RQK1 487 aa18.24■□□□□ 0.51
MSX2-201ENST00000239243 A1L4Q6 167 aa18.24■□□□□ 0.51
MSX2-201ENST00000239243 OSTCQ9NRP0 149 aa18.24■□□□□ 0.51
MSX2-201ENST00000239243 IL36BQ9NZH7 164 aa18.24■□□□□ 0.51
MSX2-201ENST00000239243 IGHV4-38-2P0DP08 117 aa18.23■□□□□ 0.51
MSX2-201ENST00000239243 HIF1ANQ9NWT6 349 aa18.23■□□□□ 0.51
MSX2-201ENST00000239243 S100A9P06702 114 aaKnown RBP18.23■□□□□ 0.51
MSX2-201ENST00000239243 OR4F17Q8NGA8 305 aa18.23■□□□□ 0.51
MSX2-201ENST00000239243 ISLRO14498 428 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 IGLV2-8P01709 118 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 UBE2G1P62253 170 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 FRZBQ92765 325 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 ATG101Q9BSB4 218 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 Q9H3A6 140 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 GAR1Q9NY12 217 aaKnown RBP18.22■□□□□ 0.51
MSX2-201ENST00000239243 ASH1LQ9NR48 2969 aaKnown RBP18.22■□□□□ 0.51
MSX2-201ENST00000239243 TRGC1P0CF51 173 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 OR5I1Q13606 314 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 TMEM183BQ1AE95 376 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 PIFOQ8TCI5 191 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 SMIM12Q96EX1 92 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 OTORQ9NRC9 128 aa18.22■□□□□ 0.51
MSX2-201ENST00000239243 UBR5O95071 2799 aaPredicted RBP18.21■□□□□ 0.51
MSX2-201ENST00000239243 PHOX2AO14813 284 aa18.21■□□□□ 0.51
MSX2-201ENST00000239243 SNRPCP09234 159 aaKnown RBP18.21■□□□□ 0.51
MSX2-201ENST00000239243 S100A7P31151 101 aa18.21■□□□□ 0.51
MSX2-201ENST00000239243 MGST1P10620 155 aaKnown RBP18.21■□□□□ 0.5
MSX2-201ENST00000239243 TMEM219Q86XT9 240 aa18.21■□□□□ 0.5
MSX2-201ENST00000239243 ZNF586Q9NXT0 402 aa18.21■□□□□ 0.5
MSX2-201ENST00000239243 V9GYV3 84 aa18.21■□□□□ 0.5
MSX2-201ENST00000239243 TRBV9A0A0B4J1U6 114 aa18.2■□□□□ 0.5
MSX2-201ENST00000239243 ZNF320A2RRD8 509 aa18.2■□□□□ 0.5
MSX2-201ENST00000239243 NDUFA6P56556 154 aa18.2■□□□□ 0.5
MSX2-201ENST00000239243 RPEL1Q2QD12 228 aa18.2■□□□□ 0.5
MSX2-201ENST00000239243 BAGE2Q86Y30 109 aa18.2■□□□□ 0.5
MSX2-201ENST00000239243 KLF12Q9Y4X4 402 aa18.2■□□□□ 0.5
MSX2-201ENST00000239243 OR2T8A6NH00 312 aa18.19■□□□□ 0.5
MSX2-201ENST00000239243 S100A8P05109 93 aa18.19■□□□□ 0.5
MSX2-201ENST00000239243 CTSGP08311 255 aa18.19■□□□□ 0.5
MSX2-201ENST00000239243 RHOGP84095 191 aa18.19■□□□□ 0.5
MSX2-201ENST00000239243 USF2Q15853 346 aaPredicted RBP18.19■□□□□ 0.5
MSX2-201ENST00000239243 C15orf32Q32M92 178 aa18.19■□□□□ 0.5
MSX2-201ENST00000239243 LINC01356Q8N9X3 169 aa18.19■□□□□ 0.5
MSX2-201ENST00000239243 LINC00479Q96M42 142 aa18.19■□□□□ 0.5
MSX2-201ENST00000239243 ZNF98A6NK75 572 aa18.19■□□□□ 0.5
MSX2-201ENST00000239243 GNG5P63218 68 aa18.19■□□□□ 0.5
MSX2-201ENST00000239243 IBA57Q5T440 356 aaKnown RBP18.19■□□□□ 0.5
MSX2-201ENST00000239243 LINC00518Q8N0U6 118 aa18.19■□□□□ 0.5
MSX2-201ENST00000239243 ZNF502Q8TBZ5 544 aa18.19■□□□□ 0.5
MSX2-201ENST00000239243 SPG11Q96JI7 2443 aa18.18■□□□□ 0.5
MSX2-201ENST00000239243 SLC17A3O00476 420 aa18.18■□□□□ 0.5
MSX2-201ENST00000239243 HOXA5P20719 270 aa18.18■□□□□ 0.5
MSX2-201ENST00000239243 CRIP2P52943 208 aaPredicted RBP18.18■□□□□ 0.5
MSX2-201ENST00000239243 LYPD1Q8N2G4 141 aa18.18■□□□□ 0.5
MSX2-201ENST00000239243 FMC1Q96HJ9 113 aa18.18■□□□□ 0.5
MSX2-201ENST00000239243 IGHV3-23P01764 117 aa18.18■□□□□ 0.5
MSX2-201ENST00000239243 RPL19P84098 196 aaKnown RBP18.18■□□□□ 0.5
MSX2-201ENST00000239243 ACTL10Q5JWF8 245 aa18.18■□□□□ 0.5
MSX2-201ENST00000239243 CMTM2Q8TAZ6 248 aa18.18■□□□□ 0.5
MSX2-201ENST00000239243 TRBV19A0A075B6N1 114 aa18.17■□□□□ 0.5
MSX2-201ENST00000239243 M0QZK8 103 aa18.17■□□□□ 0.5
MSX2-201ENST00000239243 TCRAP04437 139 aa18.17■□□□□ 0.5
MSX2-201ENST00000239243 IGLC2P0DOY2 106 aa18.17■□□□□ 0.5
MSX2-201ENST00000239243 PITPNC1Q9UKF7 332 aa18.17■□□□□ 0.5
MSX2-201ENST00000239243 G3V318 75 aa18.17■□□□□ 0.5
MSX2-201ENST00000239243 RNASE7Q9H1E1 156 aaKnown RBP18.17■□□□□ 0.5
MSX2-201ENST00000239243 TRAV34A0A0B4J273 112 aa18.16■□□□□ 0.5
MSX2-201ENST00000239243 SH2D7A6NKC9 451 aaPredicted RBP18.16■□□□□ 0.5
MSX2-201ENST00000239243 H3BTX0 84 aa18.16■□□□□ 0.5
MSX2-201ENST00000239243 AMY1AP04745 511 aa18.16■□□□□ 0.5
MSX2-201ENST00000239243 FAM231DQ6ZW35 169 aa18.16■□□□□ 0.5
MSX2-201ENST00000239243 TRAV41A0A0B4J266 112 aa18.15■□□□□ 0.5
MSX2-201ENST00000239243 LINC01548A6NM66 108 aa18.15■□□□□ 0.5
MSX2-201ENST00000239243 J3QLI3 93 aa18.15■□□□□ 0.5
MSX2-201ENST00000239243 CDX1P47902 265 aaPredicted RBP18.15■□□□□ 0.5
MSX2-201ENST00000239243 EEF1AKMT3Q96AZ1 226 aa18.15■□□□□ 0.5
MSX2-201ENST00000239243 GPR82Q96P67 336 aa18.15■□□□□ 0.5
MSX2-201ENST00000239243 CHRDL1Q9BU40 450 aa18.15■□□□□ 0.5
MSX2-201ENST00000239243 BEX4Q9NWD9 120 aaPredicted RBP18.15■□□□□ 0.5
MSX2-201ENST00000239243 RABAC1Q9UI14 185 aa18.15■□□□□ 0.5
MSX2-201ENST00000239243 RPH3ALQ9UNE2 315 aa18.15■□□□□ 0.5
MSX2-201ENST00000239243 TRBV7-1A0A0A6YYK4 115 aa18.15■□□□□ 0.5
MSX2-201ENST00000239243 BMPR1BO00238 502 aa18.15■□□□□ 0.5
MSX2-201ENST00000239243 MRPS12O15235 138 aaKnown RBP18.15■□□□□ 0.5
MSX2-201ENST00000239243 PDE6HQ13956 83 aa18.15■□□□□ 0.5
MSX2-201ENST00000239243 A0A096LNT2 108 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms