RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 ATF4P18848 351 aaPredicted RBP13.05□□□□□ -0.32
PTPN11-207ENST00000639857 ID3Q02535 119 aa13.05□□□□□ -0.32
PTPN11-207ENST00000639857 C4orf46Q504U0 113 aa13.05□□□□□ -0.32
PTPN11-207ENST00000639857 ZFAND6Q6FIF0 208 aa13.05□□□□□ -0.32
PTPN11-207ENST00000639857 STXBP6Q8NFX7 210 aa13.05□□□□□ -0.32
PTPN11-207ENST00000639857 TRGV9Q99603 122 aa13.05□□□□□ -0.32
PTPN11-207ENST00000639857 CSTL1Q9H114 145 aa13.05□□□□□ -0.32
PTPN11-207ENST00000639857 SEPSECSQ9HD40 501 aaKnown RBP13.05□□□□□ -0.32
PTPN11-207ENST00000639857 IGKV1D-37A0A075B6S9 117 aa13.04□□□□□ -0.32
PTPN11-207ENST00000639857 MPTX1A8MV57 137 aa13.04□□□□□ -0.32
PTPN11-207ENST00000639857 PRSS46E5RG02 174 aa13.04□□□□□ -0.32
PTPN11-207ENST00000639857 LYRM1O43325 122 aa13.04□□□□□ -0.32
PTPN11-207ENST00000639857 BUB3O43684 328 aa13.04□□□□□ -0.32
PTPN11-207ENST00000639857 ADAP1O75689 374 aa13.04□□□□□ -0.32
PTPN11-207ENST00000639857 CFDP00746 253 aaPredicted RBP13.04□□□□□ -0.32
PTPN11-207ENST00000639857 ANXA7P20073 488 aaKnown RBP13.04□□□□□ -0.32
PTPN11-207ENST00000639857 DEFB131AP59861 70 aa13.04□□□□□ -0.32
PTPN11-207ENST00000639857 THAP8Q8NA92 274 aa13.04□□□□□ -0.32
PTPN11-207ENST00000639857 GATAD1Q8WUU5 269 aa13.04□□□□□ -0.32
PTPN11-207ENST00000639857 C20orf85Q9H1P6 137 aa13.04□□□□□ -0.32
PTPN11-207ENST00000639857 WRBO00258 174 aa13.03□□□□□ -0.32
PTPN11-207ENST00000639857 PLA2G10O15496 165 aa13.03□□□□□ -0.32
PTPN11-207ENST00000639857 NKX2-1P43699 371 aaPredicted RBP13.03□□□□□ -0.32
PTPN11-207ENST00000639857 ZNF124Q15973 351 aa13.03□□□□□ -0.32
PTPN11-207ENST00000639857 FAM24BQ8N5W8 94 aa13.03□□□□□ -0.32
PTPN11-207ENST00000639857 OR4D5Q8NGN0 318 aa13.03□□□□□ -0.32
PTPN11-207ENST00000639857 MITD1Q8WV92 249 aa13.03□□□□□ -0.32
PTPN11-207ENST00000639857 MAGT1Q9H0U3 335 aa13.03□□□□□ -0.32
PTPN11-207ENST00000639857 STRAPQ9Y3F4 350 aaKnown RBP13.03□□□□□ -0.32
PTPN11-207ENST00000639857 SNRPGP15A8MWD9 76 aa13.02□□□□□ -0.33
PTPN11-207ENST00000639857 TMEM41BQ5BJD5 291 aa13.02□□□□□ -0.33
PTPN11-207ENST00000639857 C1orf194Q5T5A4 169 aa13.02□□□□□ -0.33
PTPN11-207ENST00000639857 SIGLEC15Q6ZMC9 328 aa13.02□□□□□ -0.33
PTPN11-207ENST00000639857 S100ZQ8WXG8 99 aa13.02□□□□□ -0.33
PTPN11-207ENST00000639857 NRN1Q9NPD7 142 aa13.02□□□□□ -0.33
PTPN11-207ENST00000639857 PAIP2BQ9ULR5 123 aaKnown RBP13.02□□□□□ -0.33
PTPN11-207ENST00000639857 CSMD3Q7Z407 3707 aa13.01□□□□□ -0.33
PTPN11-207ENST00000639857 ZNF90Q03938 601 aa13.01□□□□□ -0.33
PTPN11-207ENST00000639857 SPANXN5Q5MJ07 72 aa13.01□□□□□ -0.33
PTPN11-207ENST00000639857 LEMD1Q68G75 181 aa13.01□□□□□ -0.33
PTPN11-207ENST00000639857 STHQ8IWL8 128 aa13.01□□□□□ -0.33
PTPN11-207ENST00000639857 TMEM217Q8N7C4 229 aa13.01□□□□□ -0.33
PTPN11-207ENST00000639857 FBXL17Q9UF56 701 aa13.01□□□□□ -0.33
PTPN11-207ENST00000639857 AGRNO00468 2067 aa13□□□□□ -0.33
PTPN11-207ENST00000639857 STARD9Q9P2P6 4700 aa13□□□□□ -0.33
PTPN11-207ENST00000639857 IGKV1OR2-108A0A075B7D4 117 aa13□□□□□ -0.33
PTPN11-207ENST00000639857 LCE6AA0A183 80 aa13□□□□□ -0.33
PTPN11-207ENST00000639857 TCRBP04435 133 aa13□□□□□ -0.33
PTPN11-207ENST00000639857 ZNF688P0C7X2 276 aa13□□□□□ -0.33
PTPN11-207ENST00000639857 SPP1P10451 314 aa13□□□□□ -0.33
PTPN11-207ENST00000639857 SNRPD3P62318 126 aaKnown RBP13□□□□□ -0.33
PTPN11-207ENST00000639857 POLR2GP62487 172 aaKnown RBP eCLIP13□□□□□ -0.33
PTPN11-207ENST00000639857 MORN3Q6PF18 240 aaPredicted RBP13□□□□□ -0.33
PTPN11-207ENST00000639857 TRPT1Q86TN4 253 aaKnown RBP13□□□□□ -0.33
PTPN11-207ENST00000639857 SMIM8Q96KF7 97 aa13□□□□□ -0.33
PTPN11-207ENST00000639857 PBDC1Q9BVG4 233 aa13□□□□□ -0.33
PTPN11-207ENST00000639857 SLC45A2Q9UMX9 530 aa13□□□□□ -0.33
PTPN11-207ENST00000639857 S100A7P31151 101 aa12.99□□□□□ -0.33
PTPN11-207ENST00000639857 TAS2R30P59541 319 aa12.99□□□□□ -0.33
PTPN11-207ENST00000639857 IAH1Q2TAA2 248 aaPredicted RBP12.99□□□□□ -0.33
PTPN11-207ENST00000639857 RAB40CQ96S21 281 aa12.99□□□□□ -0.33
PTPN11-207ENST00000639857 PSENENQ9NZ42 101 aa12.99□□□□□ -0.33
PTPN11-207ENST00000639857 RYR3Q15413 4870 aa12.99□□□□□ -0.33
PTPN11-207ENST00000639857 A0A0J9YWU9 116 aa12.98□□□□□ -0.33
PTPN11-207ENST00000639857 FNDC10F2Z333 226 aa12.98□□□□□ -0.33
PTPN11-207ENST00000639857 H3BP45 60 aa12.98□□□□□ -0.33
PTPN11-207ENST00000639857 SSSCA1O60232 199 aa12.98□□□□□ -0.33
PTPN11-207ENST00000639857 CA1P00915 261 aaPredicted RBP12.98□□□□□ -0.33
PTPN11-207ENST00000639857 LYZP61626 148 aa12.98□□□□□ -0.33
PTPN11-207ENST00000639857 AKR1C1Q04828 323 aa12.98□□□□□ -0.33
PTPN11-207ENST00000639857 SAMD13Q5VXD3 122 aa12.98□□□□□ -0.33
PTPN11-207ENST00000639857 ACOT7LQ6ZUV0 252 aa12.98□□□□□ -0.33
PTPN11-207ENST00000639857 TMEM144Q7Z5S9 345 aa12.98□□□□□ -0.33
PTPN11-207ENST00000639857 NUDT15Q9NV35 164 aa12.98□□□□□ -0.33
PTPN11-207ENST00000639857 TENM2Q9NT68 2774 aa12.98□□□□□ -0.33
PTPN11-207ENST00000639857 TSC22D2O75157 780 aa12.97□□□□□ -0.33
PTPN11-207ENST00000639857 ZBTB8BQ8NAP8 495 aaPredicted RBP12.97□□□□□ -0.33
PTPN11-207ENST00000639857 BPIFCQ8NFQ6 507 aa12.97□□□□□ -0.33
PTPN11-207ENST00000639857 C11orf68Q9H3H3 251 aaKnown RBP12.97□□□□□ -0.33
PTPN11-207ENST00000639857 DYNC2H1Q8NCM8 4307 aaKnown RBP12.97□□□□□ -0.33
PTPN11-207ENST00000639857 OR2F1Q13607 317 aa12.96□□□□□ -0.33
PTPN11-207ENST00000639857 PSMG4Q5JS54 123 aa12.96□□□□□ -0.33
PTPN11-207ENST00000639857 MZT2BQ6NZ67 158 aa12.96□□□□□ -0.33
PTPN11-207ENST00000639857 TMEM14EPQ6UXP3 125 aa12.96□□□□□ -0.33
PTPN11-207ENST00000639857 ZNF431Q8TF32 576 aaPredicted RBP12.96□□□□□ -0.33
PTPN11-207ENST00000639857 RARRES2Q99969 163 aa12.96□□□□□ -0.33
PTPN11-207ENST00000639857 TRAV6A0A075B6T7 132 aa12.95□□□□□ -0.34
PTPN11-207ENST00000639857 NUPR2A6NF83 97 aa12.95□□□□□ -0.34
PTPN11-207ENST00000639857 A6NHS1 94 aa12.95□□□□□ -0.34
PTPN11-207ENST00000639857 PMS2P5A8MQ11 134 aa12.95□□□□□ -0.34
PTPN11-207ENST00000639857 PAX9P55771 341 aa12.95□□□□□ -0.34
PTPN11-207ENST00000639857 DLK1P80370 383 aa12.95□□□□□ -0.34
PTPN11-207ENST00000639857 ASAH1Q13510 395 aa12.95□□□□□ -0.34
PTPN11-207ENST00000639857 ZNF846Q147U1 533 aa12.95□□□□□ -0.34
PTPN11-207ENST00000639857 ACTL10Q5JWF8 245 aa12.95□□□□□ -0.34
PTPN11-207ENST00000639857 OR11H2Q8NH07 326 aa12.95□□□□□ -0.34
PTPN11-207ENST00000639857 PPP1R14BQ96C90 147 aa12.95□□□□□ -0.34
PTPN11-207ENST00000639857 WDR12Q9GZL7 423 aaKnown RBP12.95□□□□□ -0.34
PTPN11-207ENST00000639857 RCL1Q9Y2P8 373 aaKnown RBP12.95□□□□□ -0.34
PTPN11-207ENST00000639857 FAM240BA0A1B0GVZ2 78 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms