RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 C22orf46C9J442 243 aa16.16■□□□□ 0.18
SYNGAP1-227ENST00000638142 ORM2P19652 201 aa16.16■□□□□ 0.18
SYNGAP1-227ENST00000638142 OR1B1Q8NGR6 318 aa16.16■□□□□ 0.18
SYNGAP1-227ENST00000638142 C22orf15Q8WYQ4 148 aa16.16■□□□□ 0.18
SYNGAP1-227ENST00000638142 NAV3Q8IVL0 2385 aa16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 TRAV9-2A0A087WT02 112 aa16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 IGHV2-26A0A0B4J1V2 119 aa16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 M0R2Z0 102 aa16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 TNFRSF13BO14836 293 aaPredicted RBP16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 MOSP00540 346 aa16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 LCN12Q6JVE5 192 aa16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 ASCL5Q7RTU5 278 aa16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 OR8B3Q8NGG8 313 aa16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 OR8B2Q96RD0 313 aa16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 MLST8Q9BVC4 326 aa16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 TPSG1Q9NRR2 321 aa16.15■□□□□ 0.18
SYNGAP1-227ENST00000638142 IGLC7A0M8Q6 106 aa16.14■□□□□ 0.18
SYNGAP1-227ENST00000638142 C16orf97H3BN30 126 aa16.14■□□□□ 0.18
SYNGAP1-227ENST00000638142 CORTO00230 105 aa16.14■□□□□ 0.18
SYNGAP1-227ENST00000638142 CAMPP49913 170 aa16.14■□□□□ 0.18
SYNGAP1-227ENST00000638142 MRGPRG-AS1Q2M3A8 158 aa16.14■□□□□ 0.18
SYNGAP1-227ENST00000638142 CT83Q5H943 113 aa16.14■□□□□ 0.18
SYNGAP1-227ENST00000638142 WFDC8Q8IUA0 241 aa16.14■□□□□ 0.18
SYNGAP1-227ENST00000638142 BLNKQ8WV28 456 aa16.14■□□□□ 0.18
SYNGAP1-227ENST00000638142 NBEAP1P0C6P0 100 aa16.14■□□□□ 0.17
SYNGAP1-227ENST00000638142 FAM162BQ5T6X4 162 aa16.14■□□□□ 0.17
SYNGAP1-227ENST00000638142 ATOH7Q8N100 152 aa16.14■□□□□ 0.17
SYNGAP1-227ENST00000638142 SSBP4Q9BWG4 385 aaPredicted RBP16.14■□□□□ 0.17
SYNGAP1-227ENST00000638142 RPP21Q9H633 154 aaKnown RBP16.14■□□□□ 0.17
SYNGAP1-227ENST00000638142 SOX21Q9Y651 276 aaPredicted RBP16.14■□□□□ 0.17
SYNGAP1-227ENST00000638142 ZFHX4Q86UP3 3567 aa16.14■□□□□ 0.17
SYNGAP1-227ENST00000638142 VWC2LB2RUY7 222 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 DLX6P56179 175 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 HBBP68871 147 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 LYPD2Q6UXB3 125 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 C5orf17Q8NAS9 161 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 FMC1Q96HJ9 113 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 TOMM40O96008 361 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 GPR6P46095 362 aaPredicted RBP16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 MAJINQ3KP22 176 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 EBLN2Q6P2I7 272 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 RNASEKQ6P5S7 137 aaKnown RBP16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 TEX45Q8NA69 505 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 TMEM116Q8NCL8 245 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 CCL17Q92583 94 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 PRSS22Q9GZN4 317 aa16.13■□□□□ 0.17
SYNGAP1-227ENST00000638142 A8MWL6 223 aa16.12■□□□□ 0.17
SYNGAP1-227ENST00000638142 LOXP28300 417 aaPredicted RBP16.12■□□□□ 0.17
SYNGAP1-227ENST00000638142 ZNF492Q9P255 531 aa16.12■□□□□ 0.17
SYNGAP1-227ENST00000638142 BSPH1Q075Z2 132 aa16.12■□□□□ 0.17
SYNGAP1-227ENST00000638142 TMEM155Q4W5P6 130 aa16.12■□□□□ 0.17
SYNGAP1-227ENST00000638142 HCP5Q6MZN7 132 aa16.12■□□□□ 0.17
SYNGAP1-227ENST00000638142 RITA1Q96K30 269 aa16.12■□□□□ 0.17
SYNGAP1-227ENST00000638142 CCL25O15444 150 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 LTAP01374 205 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 GP9P14770 177 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 CTSZQ9UBR2 303 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 C2orf70A6NJV1 201 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 RPL27AP46776 148 aaKnown RBP16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 HINT1P49773 126 aaPredicted RBP16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 PTTG1IPP53801 180 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 PLP1P60201 277 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 RUSC1-AS1Q66K80 236 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 OR2D3Q8NGH3 330 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 KAAG1Q9UBP8 84 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 RPH3ALQ9UNE2 315 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 COX11Q9Y6N1 276 aa16.11■□□□□ 0.17
SYNGAP1-227ENST00000638142 ENSAO43768 121 aaKnown RBP16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 IGHV1-8P0DP01 117 aa16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 PAX2Q02962 417 aa16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 TCF24Q7RTU0 167 aa16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 SGK494Q96LW2 274 aa16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 ARFGEF3Q5TH69 2177 aa16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 C19orf71A6NCJ1 209 aa16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 P01737 135 aa16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 Q56UQ5 140 aa16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 ZNF738Q8NE65 137 aa16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 GFRA4Q9GZZ7 299 aa16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 CFAP47Q6ZTR5 3102 aa16.1■□□□□ 0.17
SYNGAP1-227ENST00000638142 A0A0G2JNJ9 132 aa16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 TCRAP04437 139 aa16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 PCP4P48539 62 aa16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 UBE2V1Q13404 147 aa16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 OR4F17Q8NGA8 305 aa16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 C8orf46Q8TAG6 207 aa16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 Q9UFV3 132 aa16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 IGHV1-69-2A0A0G2JMI3 117 aa16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 IGLL1P15814 213 aa16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 LINC00322Q6ZN03 302 aaPredicted RBP16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 SSX8Q7RTT4 187 aa16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 Q9H3A6 140 aa16.09■□□□□ 0.17
SYNGAP1-227ENST00000638142 VSTM5A8MXK1 200 aa16.08■□□□□ 0.17
SYNGAP1-227ENST00000638142 THBDP07204 575 aa16.08■□□□□ 0.17
SYNGAP1-227ENST00000638142 LEMD1Q68G75 181 aa16.08■□□□□ 0.17
SYNGAP1-227ENST00000638142 TMEM133Q9H2Q1 129 aa16.08■□□□□ 0.17
SYNGAP1-227ENST00000638142 CACNA1HO95180 2353 aa16.08■□□□□ 0.16
SYNGAP1-227ENST00000638142 K7EM74 188 aa16.08■□□□□ 0.16
SYNGAP1-227ENST00000638142 UNQ5815/PRO19632Q6UWF5 114 aa16.08■□□□□ 0.16
SYNGAP1-227ENST00000638142 MUC15Q8N387 334 aa16.08■□□□□ 0.16
SYNGAP1-227ENST00000638142 GTSF1Q8WW33 167 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms