RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 VMO1Q7Z5L0 202 aa13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 POC1AQ8NBT0 407 aa13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 MGST2Q99735 147 aa13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 FAM90A26D6RGX4 464 aa13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 FCN3O75636 299 aa13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 SRSF1Q07955 248 aaKnown RBP eCLIP13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 ASCL2Q99929 193 aa13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 SPTAN1Q13813 2472 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 WNK1Q9H4A3 2382 aa13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 ATP5G3P48201 142 aa13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 RPL15P61313 204 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 SPACA3Q8IXA5 215 aa13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 NR2C2APQ86WQ0 139 aa13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 TMEM256Q8N2U0 113 aa13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 DPM2O94777 84 aa13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 SPINK8P0C7L1 97 aa13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 WDYHV1Q96HA8 205 aa13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 CECR9P0C854 216 aa13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 CSRP2Q16527 193 aa13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 TMEM30BQ3MIR4 351 aa13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 C9orf153Q5TBE3 101 aa13.66□□□□□ -0.22
CACNA1A-258ENST00000638029 RNF223E7ERA6 249 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 IL17RELQ6ZVW7 336 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 A8MXK9 166 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 Q96MF0 132 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 E9PQ18 207 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 DANCRP0C864 163 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 AQP3Q92482 292 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 KLF12Q9Y4X4 402 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 A0A1W2PRS3 328 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 DAD1P61803 113 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 ACP7Q6ZNF0 438 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 Q6ZT83 130 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 FRMPD3Q5JV73 1810 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 DUSP14O95147 198 aaKnown RBP13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 SLC50A1Q9BRV3 221 aa13.65□□□□□ -0.22
CACNA1A-258ENST00000638029 IGHV3-16A0A0C4DH30 117 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 RFPL3SP0C7P2 107 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 BAALCQ8WXS3 180 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A10PA6NDY2 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A18PA6NE21 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A16PA6NEW6 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A20PA6NIJ5 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A8PA6NJQ4 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A7PA6NKC0 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A22PA8MWA6 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A12PA8MX19 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A5PA8MXJ8 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A23PA8MXZ1 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A15PP0C7V4 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A13PP0C7W8 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A14PP0C7W9 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 FAM90A24PP0C7X0 464 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 TICRRQ7Z2Z1 1910 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 SS18Q15532 418 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 SERF1AO75920 110 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 IGKCP01834 107 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 UBE2BP63146 152 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 PIP4P2Q8N4L2 257 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 TBX6O95947 436 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 RIPPLY2Q5TAB7 128 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 Q9HAA7 133 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 NBR2O15453 112 aa13.64□□□□□ -0.23
CACNA1A-258ENST00000638029 HAPLN4Q86UW8 402 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 NRN1Q9NPD7 142 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 ADAMTS9Q9P2N4 1935 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 RAMP1O60894 148 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 PLAC1Q9HBJ0 212 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 ZNF876PQ49A33 203 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 RNF114Q9Y508 228 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 MORN3Q6PF18 240 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 GDF15Q99988 308 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 A0A0G2JMM0 328 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 A0A1W2PPB8 328 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 KIR3DP1A8MWS1 328 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 C2orf82Q6UX34 121 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 MRPS18AQ9NVS2 196 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 LEPROTO15243 131 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 LIMS1P48059 325 aa13.63□□□□□ -0.23
CACNA1A-258ENST00000638029 CFHR1Q03591 330 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 TRGV11A0A075B6L2 103 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 TM4SF5O14894 197 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 TET2Q6N021 2002 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 EPOPA6NHQ4 379 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 PRSS23O95084 383 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 CTSBP07858 339 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 CHKB-CPT1BH3BT56 60 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 H2BFSP57053 126 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 IRF3Q14653 427 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 SMIM8Q96KF7 97 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 PILRAQ9UKJ1 303 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 UCP1P25874 307 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 TCTEX1D4Q5JR98 221 aa13.62□□□□□ -0.23
CACNA1A-258ENST00000638029 RS1O15537 224 aa13.61□□□□□ -0.23
CACNA1A-258ENST00000638029 ZNF479Q96JC4 524 aa13.61□□□□□ -0.23
CACNA1A-258ENST00000638029 PFN2P35080 140 aa13.61□□□□□ -0.23
CACNA1A-258ENST00000638029 NHLRC3Q5JS37 347 aa13.61□□□□□ -0.23
CACNA1A-258ENST00000638029 SPXQ9BT56 116 aa13.61□□□□□ -0.23
CACNA1A-258ENST00000638029 SLC25A39Q9BZJ4 359 aaPredicted RBP13.61□□□□□ -0.23
CACNA1A-258ENST00000638029 C5orf66Q9H5L9 145 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms