RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ZFP92A6NM28 416 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 ZNF701M0R085 212 aaPredicted RBP12.52□□□□□ -0.41
HMGN3-203ENST00000620514 BUB3O43684 328 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 HOXB5P09067 269 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 SLC25A6P12236 298 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 GPX4P36969 197 aaPredicted RBP12.52□□□□□ -0.41
HMGN3-203ENST00000620514 EIF2B2P49770 351 aaKnown RBP12.52□□□□□ -0.41
HMGN3-203ENST00000620514 ATP5IP56385 69 aaPredicted RBP12.52□□□□□ -0.41
HMGN3-203ENST00000620514 ZNF90Q03938 601 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 BAK1Q16611 211 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 PSMG4Q5JS54 123 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 ACTL10Q5JWF8 245 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 SPANXN2Q5MJ10 180 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 LINC00476Q8WZB0 136 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 RNF125Q96EQ8 232 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 SLC35E1Q96K37 410 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 PBDC1Q9BVG4 233 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 MAGT1Q9H0U3 335 aa12.52□□□□□ -0.41
HMGN3-203ENST00000620514 PAIP2BQ9ULR5 123 aaKnown RBP12.52□□□□□ -0.41
HMGN3-203ENST00000620514 PIGBOS1A0A0B4J2F0 54 aa12.51□□□□□ -0.41
HMGN3-203ENST00000620514 C4BPBP20851 252 aa12.51□□□□□ -0.41
HMGN3-203ENST00000620514 AP2S1P53680 142 aaPredicted RBP12.51□□□□□ -0.41
HMGN3-203ENST00000620514 GGNBP1Q5YKI7 109 aa12.51□□□□□ -0.41
HMGN3-203ENST00000620514 C11orf68Q9H3H3 251 aaKnown RBP12.51□□□□□ -0.41
HMGN3-203ENST00000620514 TMED3Q9Y3Q3 217 aa12.51□□□□□ -0.41
HMGN3-203ENST00000620514 BIRC6Q9NR09 4857 aa12.5□□□□□ -0.41
HMGN3-203ENST00000620514 FAM90A26D6RGX4 464 aa12.5□□□□□ -0.41
HMGN3-203ENST00000620514 NANOS2P60321 138 aaKnown RBP12.5□□□□□ -0.41
HMGN3-203ENST00000620514 OR2F1Q13607 317 aa12.5□□□□□ -0.41
HMGN3-203ENST00000620514 SIGLEC15Q6ZMC9 328 aa12.5□□□□□ -0.41
HMGN3-203ENST00000620514 PHLDA1Q8WV24 401 aaPredicted RBP12.5□□□□□ -0.41
HMGN3-203ENST00000620514 RAB40CQ96S21 281 aa12.5□□□□□ -0.41
HMGN3-203ENST00000620514 SDHCQ99643 169 aaPredicted RBP12.5□□□□□ -0.41
HMGN3-203ENST00000620514 NRN1Q9NPD7 142 aa12.5□□□□□ -0.41
HMGN3-203ENST00000620514 FLVCR2Q9UPI3 526 aa12.5□□□□□ -0.41
HMGN3-203ENST00000620514 LINC00854A0A1B0GVQ3 168 aa12.49□□□□□ -0.41
HMGN3-203ENST00000620514 WRBO00258 174 aa12.49□□□□□ -0.41
HMGN3-203ENST00000620514 MED6O75586 246 aa12.49□□□□□ -0.41
HMGN3-203ENST00000620514 LY6G6CO95867 125 aa12.49□□□□□ -0.41
HMGN3-203ENST00000620514 RAB11AP62491 216 aa12.49□□□□□ -0.41
HMGN3-203ENST00000620514 GSG1LQ6UXU4 331 aa12.49□□□□□ -0.41
HMGN3-203ENST00000620514 CLEC5AQ9NY25 188 aa12.49□□□□□ -0.41
HMGN3-203ENST00000620514 IGKV1OR2-108A0A075B7D4 117 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 C9orf170A2RU37 121 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 SYNGR2O43760 224 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 ADAP1O75689 374 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 NDUFB6O95139 128 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 SPP1P10451 314 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 INPP1P49441 399 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 LYZP61626 148 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 TRIQKQ629K1 86 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 OR8G2PQ6IF36 304 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 MORN3Q6PF18 240 aaPredicted RBP12.48□□□□□ -0.41
HMGN3-203ENST00000620514 C11orf45Q8TAV5 145 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 FBXL17Q9UF56 701 aa12.48□□□□□ -0.41
HMGN3-203ENST00000620514 KLK5Q9Y337 293 aaPredicted RBP12.48□□□□□ -0.41
HMGN3-203ENST00000620514 NAP1L6A6NFF2 107 aa12.47□□□□□ -0.41
HMGN3-203ENST00000620514 PRSS46E5RG02 174 aa12.47□□□□□ -0.41
HMGN3-203ENST00000620514 UBE2MP61081 183 aaKnown RBP12.47□□□□□ -0.41
HMGN3-203ENST00000620514 Q8NAQ8 132 aa12.47□□□□□ -0.41
HMGN3-203ENST00000620514 CIB3Q96Q77 187 aaPredicted RBP12.47□□□□□ -0.41
HMGN3-203ENST00000620514 TRGV9Q99603 122 aa12.47□□□□□ -0.41
HMGN3-203ENST00000620514 IGHV4-28A0A0C4DH34 117 aa12.46□□□□□ -0.41
HMGN3-203ENST00000620514 H3BP45 60 aa12.46□□□□□ -0.41
HMGN3-203ENST00000620514 RBMY1A1P0DJD3 496 aaKnown RBP12.46□□□□□ -0.41
HMGN3-203ENST00000620514 RBMY1CP0DJD4 496 aa12.46□□□□□ -0.41
HMGN3-203ENST00000620514 BTCP35070 178 aa12.46□□□□□ -0.41
HMGN3-203ENST00000620514 DEFB1P60022 68 aa12.46□□□□□ -0.41
HMGN3-203ENST00000620514 SNRPD3P62318 126 aaKnown RBP12.46□□□□□ -0.41
HMGN3-203ENST00000620514 RBMY1FQ15415 496 aaKnown RBP12.46□□□□□ -0.41
HMGN3-203ENST00000620514 TMEM41BQ5BJD5 291 aa12.46□□□□□ -0.41
HMGN3-203ENST00000620514 SPANXN5Q5MJ07 72 aa12.46□□□□□ -0.41
HMGN3-203ENST00000620514 THAP8Q8NA92 274 aa12.46□□□□□ -0.41
HMGN3-203ENST00000620514 WDR12Q9GZL7 423 aaKnown RBP12.46□□□□□ -0.41
HMGN3-203ENST00000620514 X6R8D5 127 aa12.46□□□□□ -0.41
HMGN3-203ENST00000620514 SNRPGP15A8MWD9 76 aa12.45□□□□□ -0.42
HMGN3-203ENST00000620514 FABP1P07148 127 aa12.45□□□□□ -0.42
HMGN3-203ENST00000620514 NUP62P37198 522 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-203ENST00000620514 CSNK1G2-AS1Q8NCQ2 148 aa12.45□□□□□ -0.42
HMGN3-203ENST00000620514 SEPSECSQ9HD40 501 aaKnown RBP12.45□□□□□ -0.42
HMGN3-203ENST00000620514 ZNF705EA8MWA4 302 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-203ENST00000620514 H3BMM0 161 aa12.44□□□□□ -0.42
HMGN3-203ENST00000620514 OR4E1P0C645 316 aa12.44□□□□□ -0.42
HMGN3-203ENST00000620514 ANXA7P20073 488 aaKnown RBP12.44□□□□□ -0.42
HMGN3-203ENST00000620514 POLR2GP62487 172 aaKnown RBP eCLIP12.44□□□□□ -0.42
HMGN3-203ENST00000620514 RPP30P78346 268 aaKnown RBP12.44□□□□□ -0.42
HMGN3-203ENST00000620514 ID3Q02535 119 aa12.44□□□□□ -0.42
HMGN3-203ENST00000620514 GDF5OSQ5U4N7 250 aa12.44□□□□□ -0.42
HMGN3-203ENST00000620514 TMEM182Q6ZP80 229 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-203ENST00000620514 PPP1R14BQ96C90 147 aa12.44□□□□□ -0.42
HMGN3-203ENST00000620514 MFFQ9GZY8 342 aa12.44□□□□□ -0.42
HMGN3-203ENST00000620514 PFDN2Q9UHV9 154 aa12.44□□□□□ -0.42
HMGN3-203ENST00000620514 IL7P13232 177 aa12.43□□□□□ -0.42
HMGN3-203ENST00000620514 GATA2P23769 480 aaPredicted RBP12.43□□□□□ -0.42
HMGN3-203ENST00000620514 C1orf194Q5T5A4 169 aa12.43□□□□□ -0.42
HMGN3-203ENST00000620514 ACOT7LQ6ZUV0 252 aa12.43□□□□□ -0.42
HMGN3-203ENST00000620514 OR4D5Q8NGN0 318 aa12.43□□□□□ -0.42
HMGN3-203ENST00000620514 COQ8AQ8NI60 647 aa12.43□□□□□ -0.42
HMGN3-203ENST00000620514 LINC00052Q96N35 136 aa12.43□□□□□ -0.42
HMGN3-203ENST00000620514 XCL2Q9UBD3 114 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms