RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 VDAC2P45880 294 aaPredicted RBP12.01□□□□□ -0.49
PTPN9-206ENST00000618819 FAM27E3Q08E93 113 aa12.01□□□□□ -0.49
PTPN9-206ENST00000618819 ETDBQ3ZM63 59 aa12.01□□□□□ -0.49
PTPN9-206ENST00000618819 RASL11AQ6T310 242 aa12.01□□□□□ -0.49
PTPN9-206ENST00000618819 CECR9P0C854 216 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 TRGV1A0A0A0MS02 117 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 CELA3BP08861 270 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 MESP2Q0VG99 397 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 B5MCH6 92 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 FHL5Q5TD97 284 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 SPANXA1Q9NS26 97 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 COX6A1P12074 109 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 IGFL4Q6B9Z1 124 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 A0A087WWL8 130 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 TRBV6-7A0A0A0MS04 114 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 A0A1B0GUS0 222 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 TMEM258P61165 79 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 SVIPQ8NHG7 77 aa12□□□□□ -0.49
PTPN9-206ENST00000618819 ANXA2RQ3ZCQ2 193 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 C7orf69Q9H7B7 122 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 A8MWP6 167 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 FGF11Q92914 225 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 RPUSD1Q9UJJ7 312 aaKnown RBP11.99□□□□□ -0.49
PTPN9-206ENST00000618819 AMN1Q8IY45 258 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 PPDPFLQ8WWR9 84 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 UBL5Q9BZL1 73 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 CELA3AP09093 270 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 NSUN5P1Q3KNT7 163 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 BSPH1Q075Z2 132 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 LINC01559Q495D7 138 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 TREML4Q6UXN2 200 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 ZIC4Q8N9L1 334 aa11.99□□□□□ -0.49
PTPN9-206ENST00000618819 ARHGEF17Q96PE2 2063 aaPredicted RBP11.98□□□□□ -0.49
PTPN9-206ENST00000618819 GAGE12HA6NDE8 117 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 TOGARAM1Q9Y4F4 1720 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 CABIN1Q9Y6J0 2220 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 RFPL3SP0C7P2 107 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 MORN2Q502X0 79 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 C9orf118A6NHY6 69 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 PSCAO43653 123 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 TINCRA0A1B0GVN0 87 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 K7EP13 123 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 VCYO14598 125 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 OVOL1O14753 267 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 DUSP15Q9H1R2 295 aaPredicted RBP11.98□□□□□ -0.49
PTPN9-206ENST00000618819 LINC00312Q9Y6C7 94 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 CACNA1DQ01668 2161 aa11.98□□□□□ -0.49
PTPN9-206ENST00000618819 PAX8Q06710 450 aa11.97□□□□□ -0.49
PTPN9-206ENST00000618819 NDPQ00604 133 aa11.97□□□□□ -0.49
PTPN9-206ENST00000618819 Q6ZT83 130 aa11.97□□□□□ -0.49
PTPN9-206ENST00000618819 TOPAZ1Q8N9V7 1692 aa11.97□□□□□ -0.49
PTPN9-206ENST00000618819 SRRM4A7MD48 611 aaKnown RBP11.97□□□□□ -0.49
PTPN9-206ENST00000618819 PSG7Q13046 419 aa11.97□□□□□ -0.49
PTPN9-206ENST00000618819 AGMATQ9BSE5 352 aa11.97□□□□□ -0.49
PTPN9-206ENST00000618819 ZNF837Q96EG3 531 aaPredicted RBP11.97□□□□□ -0.49
PTPN9-206ENST00000618819 IGHG3P01860 377 aa11.97□□□□□ -0.49
PTPN9-206ENST00000618819 RPL36AP83881 106 aaKnown RBP11.96□□□□□ -0.49
PTPN9-206ENST00000618819 PRCDQ00LT1 54 aa11.96□□□□□ -0.49
PTPN9-206ENST00000618819 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.96□□□□□ -0.49
PTPN9-206ENST00000618819 RPL36ALQ969Q0 106 aaKnown RBP11.96□□□□□ -0.49
PTPN9-206ENST00000618819 REG4Q9BYZ8 158 aa11.96□□□□□ -0.49
PTPN9-206ENST00000618819 INAFM2P0DMQ5 153 aa11.96□□□□□ -0.49
PTPN9-206ENST00000618819 NCOR1P1Q9H4R4 102 aa11.96□□□□□ -0.49
PTPN9-206ENST00000618819 hADV29S1A0JD25 119 aa11.96□□□□□ -0.49
PTPN9-206ENST00000618819 SLC25A39Q9BZJ4 359 aaPredicted RBP11.96□□□□□ -0.49
PTPN9-206ENST00000618819 TJP1Q07157 1748 aa11.96□□□□□ -0.49
PTPN9-206ENST00000618819 NDUFS5O43920 106 aa11.96□□□□□ -0.5
PTPN9-206ENST00000618819 IGKV1D-8A0A087WSZ0 117 aa11.96□□□□□ -0.5
PTPN9-206ENST00000618819 LINC01549A6NIU2 74 aa11.96□□□□□ -0.5
PTPN9-206ENST00000618819 IQCF6A8MYZ5 107 aa11.96□□□□□ -0.5
PTPN9-206ENST00000618819 PFN2P35080 140 aa11.96□□□□□ -0.5
PTPN9-206ENST00000618819 SLAQ13239 276 aa11.96□□□□□ -0.5
PTPN9-206ENST00000618819 CYTL1Q9NRR1 136 aa11.96□□□□□ -0.5
PTPN9-206ENST00000618819 IGFBP3P17936 291 aaPredicted RBP11.95□□□□□ -0.5
PTPN9-206ENST00000618819 RPL35AP18077 110 aaKnown RBP11.95□□□□□ -0.5
PTPN9-206ENST00000618819 IGHV2OR16-5A0A0B4J2B6 119 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 WDR83OSQ9Y284 106 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 A0A0A6YYD4 124 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 FGF6P10767 208 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 CRYBA4P53673 196 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 C10orf55Q5SWW7 151 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 ZNF497Q6ZNH5 498 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 K7ERJ3 54 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 YPEL1O60688 119 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 YPEL2Q96QA6 119 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 C1QTNF5Q9BXJ0 243 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 A0A1W2PR77 199 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 ID3Q02535 119 aa11.95□□□□□ -0.5
PTPN9-206ENST00000618819 MRPL27Q9P0M9 148 aaKnown RBP11.95□□□□□ -0.5
PTPN9-206ENST00000618819 TGFBR3LH3BV60 316 aa11.94□□□□□ -0.5
PTPN9-206ENST00000618819 SLC25A16P16260 332 aa11.94□□□□□ -0.5
PTPN9-206ENST00000618819 FAM168AQ92567 244 aa11.94□□□□□ -0.5
PTPN9-206ENST00000618819 SMIM20Q8N5G0 67 aa11.94□□□□□ -0.5
PTPN9-206ENST00000618819 F8W1H4 67 aa11.94□□□□□ -0.5
PTPN9-206ENST00000618819 PRR19A6NJB7 356 aa11.94□□□□□ -0.5
PTPN9-206ENST00000618819 K7EP34 96 aa11.94□□□□□ -0.5
PTPN9-206ENST00000618819 C1QTNF4Q9BXJ3 329 aa11.94□□□□□ -0.5
PTPN9-206ENST00000618819 SCN7AQ01118 1682 aa11.93□□□□□ -0.5
PTPN9-206ENST00000618819 FCN3O75636 299 aa11.93□□□□□ -0.5
PTPN9-206ENST00000618819 ZCCHC24Q8N2G6 241 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms