RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 NAT1P18440 290 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 AGAP20933 346 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 LOXP28300 417 aaPredicted RBP8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 RNASE4P34096 147 aaKnown RBP8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 RIPPLY3P57055 190 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 PSMG4Q5JS54 123 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 SYT8Q8NBV8 401 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 TBX15Q96SF7 602 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 SIGLEC9Q9Y336 463 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 TRGV2A0A075B6R0 118 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 PSG1P11464 419 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 HNRNPA3P51991 378 aaKnown RBP8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 TMEM155Q4W5P6 130 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 PRR31Q5SQ13 230 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 Q6ZRM9 215 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 STPG2Q8N412 459 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 C19orf24Q9BVV8 132 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 SPRY4Q9C004 299 aa8.27□□□□□ -1.09
SMARCA1-205ENST00000617310 TRAV20A0A0B4J274 112 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 PEX7O00628 323 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 MINOS1Q5TGZ0 78 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 PIP4P2Q8N4L2 257 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 GPR82Q96P67 336 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 TXNDC17Q9BRA2 123 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 VSIRQ9H7M9 311 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 BET1LQ9NYM9 111 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 MINOS1-NBL1R4GNA1 71 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 PMS2P5A8MQ11 134 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 IGLV1-44P01699 117 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 PEMTQ9UBM1 199 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 TGIF2-C20orf24A0A0A6YYL0 155 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 TMEM262E9PQX1 116 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 M0R1W7 72 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 CBLN1P23435 193 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 ELOBQ15370 118 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 IGFL2Q6UWQ7 119 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 C19orf35Q6ZS72 473 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 STHQ8IWL8 128 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 KLHDC1Q8N7A1 406 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 MYOZ3Q8TDC0 251 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 GGACTQ9BVM4 153 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 SCRT1Q9BWW7 348 aa8.26□□□□□ -1.09
SMARCA1-205ENST00000617310 OVOL3O00110 214 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 DKK1O94907 266 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 DIAPH2-AS1Q14236 149 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 SPRNQ5BIV9 151 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 PLXNB1O43157 2135 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 SRIP30626 198 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 GPX4P36969 197 aaPredicted RBP8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 SAPCD1Q5SSQ6 148 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 SPATA31B1PQ5VZV4 182 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 BIVMQ86UB2 503 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 DEFB104AQ8WTQ1 72 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 WDR83OSQ9Y284 106 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 PAM16Q9Y3D7 125 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 TRBV20OR9-2A0A075B6H5 130 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 C22orf46C9J442 243 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 SCGB1C2P0DMR2 95 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 MEOX2P50222 304 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 SYNJ2BPP57105 145 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 ADORA2A-AS1P86434 159 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 IQCJQ1A5X6 159 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 TREML4Q6UXN2 200 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 VN1R17PQ8TDU5 208 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 REG4Q9BYZ8 158 aa8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 MBNL3Q9NUK0 354 aaKnown RBP8.25□□□□□ -1.09
SMARCA1-205ENST00000617310 NPIPB6E9PJ23 425 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 VENTXO95231 258 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 TCF24Q7RTU0 167 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 Q8NA96 180 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 OR1P1Q8NH06 330 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 C1orf147Q96MC9 270 aaPredicted RBP8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 ZNF324O75467 553 aaPredicted RBP8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 CD7P09564 240 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 CCKARP32238 428 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 EFNB3Q15768 340 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 VAMP3Q15836 100 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 COX19Q49B96 90 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 SEM1Q6ZVN7 128 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 EXOC3-AS1Q8N2X6 119 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 OR4D5Q8NGN0 318 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 TMEM167AQ8TBQ9 72 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 WFDC1Q9HC57 220 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 SHISA9B4DS77 424 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 UBE2L6O14933 153 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 CCL20P78556 96 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 DPH3Q96FX2 82 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 TMEM191AQ9H0A3 160 aa8.24□□□□□ -1.09
SMARCA1-205ENST00000617310 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 RPL35AP18077 110 aaKnown RBP8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 FXYD7P58549 80 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 NMSQ5H8A3 153 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 HIST1H2BAQ96A08 127 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 PACRGQ96M98 296 aaPredicted RBP8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 IGHV4-61A0A0C4DH41 118 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 NDUFS8O00217 210 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 PVRIGQ6DKI7 326 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 TEX38Q6PEX7 206 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 SFRP2Q96HF1 295 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 MAP1LC3CQ9BXW4 147 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms