RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ODF3L1Q8IXM7 274 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 ZNF114Q8NC26 417 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 ST6GALNAC3Q8NDV1 305 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 OR5AN1Q8NGI8 311 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 FOXA2Q9Y261 457 aaPredicted RBP4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 CLPSL1A2RUU4 121 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMEM178BH3BS89 294 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 K7EM74 188 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 SIAH2O43255 324 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 GHRHP01286 108 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 PLA2G1BP04054 148 aaKnown RBP4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 HNRNPA3P51991 378 aaKnown RBP4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 LINC00479Q96M42 142 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 HIGD1AQ9Y241 93 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 LY6HO94772 140 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 MAS1LP35410 378 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 WT1-ASQ06250 92 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 PRSS8Q16651 343 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 LBHQ53QV2 105 aaPredicted RBP4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 GAFA1Q96PS6 74 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 PEX7O00628 323 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 CGB3P0DN86 165 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 CGB7P0DN87 165 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 FA2HQ7L5A8 372 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 OR4A5Q8NH83 315 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 UNC79Q9P2D8 2635 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 C9JCJ5 164 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 RPL11P62913 178 aaKnown RBP4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 PRR20EP86478 221 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 PRR20CP86479 221 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 PRR20DP86480 221 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 PRR20BP86481 221 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 PRR20AP86496 221 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMEM14BQ9NUH8 114 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 NAGKQ9UJ70 344 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGHV3OR16-13A0A075B7E8 117 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGHV3OR16-8A0A075B7F1 116 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGHV3-74A0A0B4J1X5 117 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 A0A0G2JNJ9 132 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMEM200BQ69YZ2 307 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 REC114Q7Z4M0 266 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 Q9UFV3 132 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 ATMQ13315 3056 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 TACC2O95359 2948 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 M0R3E3 92 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGLV2-14P01704 120 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 APCSP02743 223 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGHV1-8P0DP01 117 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 FCGR2BP31994 310 aaPredicted RBP4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 KLF17Q5JT82 389 aaPredicted RBP4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 NEUROG1Q92886 237 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 LSM4Q9Y4Z0 139 aaKnown RBP4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 YTHDF2Q9Y5A9 579 aaKnown RBP4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 S4R3C0 116 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 P0C879 139 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 COA6Q5JTJ3 125 aaKnown RBP4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 ZNF600Q6ZNG1 722 aa4.59□□□□□ -1.67
SYNCRIP-204ENST00000616122 ADGRG4Q8IZF6 3080 aa4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 ZNF785A8K8V0 405 aa4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 G0S2P27469 103 aa4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 C17orf58Q2M2W7 97 aa4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 LYPD2Q6UXB3 125 aa4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 FAM19A2Q8N3H0 131 aa4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 RBM14Q96PK6 669 aaKnown RBP4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 TMEM191AQ9H0A3 160 aa4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 PRDM13Q9H4Q3 707 aa4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 FNDC4Q9H6D8 234 aaPredicted RBP4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 BEX4Q9NWD9 120 aaPredicted RBP4.59□□□□□ -1.68
SYNCRIP-204ENST00000616122 TCRBV4S1A1TA0A5B7 111 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 PMS2P5A8MQ11 134 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 M0R2Z0 102 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 GZMBP10144 247 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 LOXP28300 417 aaPredicted RBP4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 ZNF672Q499Z4 452 aaPredicted RBP4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 TMEM155Q4W5P6 130 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 OR4B1Q8NGF8 309 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 Q8TCH9 128 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 AP5S1Q9NUS5 200 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 ADAMTS9Q9P2N4 1935 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 A0A1B0GUS0 222 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 A0A1W2PPI3 338 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 H0YJW9 148 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 TIMM23O14925 209 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 DLX1P56177 255 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 C5orf30Q96GV9 206 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 NEU1Q99519 415 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 TRAV9-1A0A075B6T8 112 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 TCAPO15273 167 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 PLA2G5P39877 138 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 TMEM249Q2WGJ8 235 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 SMIM15Q7Z3B0 74 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 LHFPL4Q7Z7J7 247 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 CDC42EP3Q9UKI2 254 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 TRAV8-1A0A0A6YYK1 113 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 HIGD1CA8MV81 97 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 GGTLC3B5MD39 225 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 LEPROTL1O95214 131 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 TBR1Q16650 682 aa4.58□□□□□ -1.68
SYNCRIP-204ENST00000616122 PRR30Q53SZ7 412 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms