RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 TCF20Q9UGU0 1960 aaKnown RBP17.12■□□□□ 0.33
SMAD6-205ENST00000612349 FBLN7Q53RD9 439 aa17.12■□□□□ 0.33
SMAD6-205ENST00000612349 JKAMPQ9P055 326 aa17.12■□□□□ 0.33
SMAD6-205ENST00000612349 LINC00527Q9UJ94 153 aa17.12■□□□□ 0.33
SMAD6-205ENST00000612349 K7ENP7 123 aa17.11■□□□□ 0.33
SMAD6-205ENST00000612349 SRSF6Q13247 344 aaKnown RBP17.11■□□□□ 0.33
SMAD6-205ENST00000612349 ARTNQ5T4W7 220 aa17.11■□□□□ 0.33
SMAD6-205ENST00000612349 GLRX5Q86SX6 157 aa17.11■□□□□ 0.33
SMAD6-205ENST00000612349 NSUN5P1Q3KNT7 163 aa17.11■□□□□ 0.33
SMAD6-205ENST00000612349 C10orf55Q5SWW7 151 aa17.11■□□□□ 0.33
SMAD6-205ENST00000612349 BEX4Q9NWD9 120 aaPredicted RBP17.11■□□□□ 0.33
SMAD6-205ENST00000612349 ZNF474Q6S9Z5 364 aaPredicted RBP17.11■□□□□ 0.33
SMAD6-205ENST00000612349 NDUFS8O00217 210 aa17.1■□□□□ 0.33
SMAD6-205ENST00000612349 GHRHP01286 108 aa17.1■□□□□ 0.33
SMAD6-205ENST00000612349 C11orf44Q8N8P7 122 aa17.1■□□□□ 0.33
SMAD6-205ENST00000612349 GAFA1Q96PS6 74 aa17.1■□□□□ 0.33
SMAD6-205ENST00000612349 GGTLC1Q9BX51 225 aa17.1■□□□□ 0.33
SMAD6-205ENST00000612349 SRSF1Q07955 248 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMAD6-205ENST00000612349 USMG5Q96IX5 58 aa17.1■□□□□ 0.33
SMAD6-205ENST00000612349 TRGV9Q99603 122 aa17.1■□□□□ 0.33
SMAD6-205ENST00000612349 CYSLTR1Q9Y271 337 aa17.1■□□□□ 0.33
SMAD6-205ENST00000612349 COL4A6Q14031 1691 aa17.1■□□□□ 0.33
SMAD6-205ENST00000612349 ORMDL2Q53FV1 153 aa17.1■□□□□ 0.33
SMAD6-205ENST00000612349 TMEM219Q86XT9 240 aa17.09■□□□□ 0.33
SMAD6-205ENST00000612349 PRDM13Q9H4Q3 707 aa17.09■□□□□ 0.33
SMAD6-205ENST00000612349 TRBV7-1A0A0A6YYK4 115 aa17.09■□□□□ 0.33
SMAD6-205ENST00000612349 FGF16O43320 207 aa17.09■□□□□ 0.33
SMAD6-205ENST00000612349 STAG3L3P0CL85 134 aa17.09■□□□□ 0.33
SMAD6-205ENST00000612349 KLRD1Q13241 179 aa17.09■□□□□ 0.33
SMAD6-205ENST00000612349 SCN8AQ9UQD0 1980 aa17.09■□□□□ 0.33
SMAD6-205ENST00000612349 C1QTNF9P0C862 333 aa17.09■□□□□ 0.33
SMAD6-205ENST00000612349 BUB1B-PAK6H3BSN5 160 aa17.08■□□□□ 0.33
SMAD6-205ENST00000612349 PSG1P11464 419 aa17.08■□□□□ 0.33
SMAD6-205ENST00000612349 PEF1Q9UBV8 284 aaKnown RBP17.08■□□□□ 0.33
SMAD6-205ENST00000612349 H0YJW9 148 aa17.08■□□□□ 0.32
SMAD6-205ENST00000612349 SAP30O75446 220 aa17.08■□□□□ 0.32
SMAD6-205ENST00000612349 SRSF3P84103 164 aaKnown RBP17.08■□□□□ 0.32
SMAD6-205ENST00000612349 DMRTA1Q5VZB9 504 aa17.08■□□□□ 0.32
SMAD6-205ENST00000612349 C9orf139Q6ZV77 190 aa17.08■□□□□ 0.32
SMAD6-205ENST00000612349 UBE2CO00762 179 aa17.08■□□□□ 0.32
SMAD6-205ENST00000612349 MALP21145 153 aa17.08■□□□□ 0.32
SMAD6-205ENST00000612349 TEX38Q6PEX7 206 aa17.08■□□□□ 0.32
SMAD6-205ENST00000612349 MRPL16Q9NX20 251 aaKnown RBP17.08■□□□□ 0.32
SMAD6-205ENST00000612349 Q6ZS49 121 aa17.07■□□□□ 0.32
SMAD6-205ENST00000612349 ZSWIM8A7E2V4 1837 aa17.07■□□□□ 0.32
SMAD6-205ENST00000612349 Q6P435 159 aa17.07■□□□□ 0.32
SMAD6-205ENST00000612349 LINC01356Q8N9X3 169 aa17.07■□□□□ 0.32
SMAD6-205ENST00000612349 TSKUQ8WUA8 353 aa17.07■□□□□ 0.32
SMAD6-205ENST00000612349 RBMY1BA6NDE4 496 aaKnown RBP17.07■□□□□ 0.32
SMAD6-205ENST00000612349 RBMY1EA6NEQ0 496 aaKnown RBP17.07■□□□□ 0.32
SMAD6-205ENST00000612349 RBMY1DP0C7P1 496 aaKnown RBP17.07■□□□□ 0.32
SMAD6-205ENST00000612349 RBMY1A1P0DJD3 496 aaKnown RBP17.07■□□□□ 0.32
SMAD6-205ENST00000612349 RBMY1CP0DJD4 496 aa17.07■□□□□ 0.32
SMAD6-205ENST00000612349 OCC1Q8TAD7 63 aa17.07■□□□□ 0.32
SMAD6-205ENST00000612349 NDUFAF3Q9BU61 184 aa17.07■□□□□ 0.32
SMAD6-205ENST00000612349 HBDP02042 147 aa17.06■□□□□ 0.32
SMAD6-205ENST00000612349 NMSQ5H8A3 153 aa17.06■□□□□ 0.32
SMAD6-205ENST00000612349 PRTN3P24158 256 aa17.06■□□□□ 0.32
SMAD6-205ENST00000612349 SSC4DQ8WTU2 575 aa17.06■□□□□ 0.32
SMAD6-205ENST00000612349 GATA3P23771 443 aa17.06■□□□□ 0.32
SMAD6-205ENST00000612349 ATP5L2Q7Z4Y8 100 aa17.06■□□□□ 0.32
SMAD6-205ENST00000612349 TMEM170AQ8WVE7 144 aa17.06■□□□□ 0.32
SMAD6-205ENST00000612349 BRD3OSQ6XYD6 125 aa17.05■□□□□ 0.32
SMAD6-205ENST00000612349 NUDT10Q8NFP7 164 aa17.05■□□□□ 0.32
SMAD6-205ENST00000612349 SLC25A39Q9BZJ4 359 aaPredicted RBP17.05■□□□□ 0.32
SMAD6-205ENST00000612349 IGKV1D-17A0A075B6S4 117 aa17.05■□□□□ 0.32
SMAD6-205ENST00000612349 PMS2P5A8MQ11 134 aa17.05■□□□□ 0.32
SMAD6-205ENST00000612349 CD33P20138 364 aa17.05■□□□□ 0.32
SMAD6-205ENST00000612349 TMEM14EPQ6UXP3 125 aa17.05■□□□□ 0.32
SMAD6-205ENST00000612349 COQ2Q96H96 371 aa17.05■□□□□ 0.32
SMAD6-205ENST00000612349 WFDC1Q9HC57 220 aa17.05■□□□□ 0.32
SMAD6-205ENST00000612349 CRIM1Q9NZV1 1036 aa17.05■□□□□ 0.32
SMAD6-205ENST00000612349 SIGLEC9Q9Y336 463 aa17.05■□□□□ 0.32
SMAD6-205ENST00000612349 TRAV1-1A0A0B4J248 108 aa17.04■□□□□ 0.32
SMAD6-205ENST00000612349 SUPT4H1P63272 117 aaKnown RBP17.04■□□□□ 0.32
SMAD6-205ENST00000612349 IGFL3Q6UXB1 125 aa17.04■□□□□ 0.32
SMAD6-205ENST00000612349 IGKV1-5P01602 117 aa17.04■□□□□ 0.32
SMAD6-205ENST00000612349 SRSF8Q9BRL6 282 aaKnown RBP17.04■□□□□ 0.32
SMAD6-205ENST00000612349 USF3Q68DE3 2245 aa17.04■□□□□ 0.32
SMAD6-205ENST00000612349 CREBBPQ92793 2442 aa17.04■□□□□ 0.32
SMAD6-205ENST00000612349 TRBV7-9A0A0J9YWB2 115 aa17.04■□□□□ 0.32
SMAD6-205ENST00000612349 SEPSECSQ9HD40 501 aaKnown RBP17.04■□□□□ 0.32
SMAD6-205ENST00000612349 WNK2Q9Y3S1 2297 aa17.04■□□□□ 0.32
SMAD6-205ENST00000612349 BDP1A6H8Y1 2624 aa17.04■□□□□ 0.32
SMAD6-205ENST00000612349 CRPP02741 224 aa17.03■□□□□ 0.32
SMAD6-205ENST00000612349 FAM19A2Q8N3H0 131 aa17.03■□□□□ 0.32
SMAD6-205ENST00000612349 BPESC1Q9GZL8 116 aa17.03■□□□□ 0.32
SMAD6-205ENST00000612349 GNB1LQ9BYB4 327 aa17.03■□□□□ 0.32
SMAD6-205ENST00000612349 ITGB1BP1O14713 200 aa17.03■□□□□ 0.32
SMAD6-205ENST00000612349 FAM223BA6NKX1 122 aa17.03■□□□□ 0.32
SMAD6-205ENST00000612349 COL8A2P25067 703 aa17.03■□□□□ 0.32
SMAD6-205ENST00000612349 C3orf36Q3SXR2 165 aa17.03■□□□□ 0.32
SMAD6-205ENST00000612349 FAM223AQ8IWN6 122 aa17.03■□□□□ 0.32
SMAD6-205ENST00000612349 PLXNA3P51805 1871 aa17.03■□□□□ 0.32
SMAD6-205ENST00000612349 E7EQL1 145 aa17.02■□□□□ 0.32
SMAD6-205ENST00000612349 NDUFA3O95167 84 aa17.02■□□□□ 0.32
SMAD6-205ENST00000612349 PCNX1Q96RV3 2341 aa17.02■□□□□ 0.32
SMAD6-205ENST00000612349 TRAV5A0A0B4J249 113 aa17.02■□□□□ 0.32
SMAD6-205ENST00000612349 SERF1AO75920 110 aa17.02■□□□□ 0.32
SMAD6-205ENST00000612349 PIP4P2Q8N4L2 257 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms