RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 SIX6O95475 246 aa9.06□□□□□ -0.96
HLA-F-230ENST00000606273 PTTG1O95997 202 aa9.06□□□□□ -0.96
HLA-F-230ENST00000606273 CTSGP08311 255 aa9.06□□□□□ -0.96
HLA-F-230ENST00000606273 NPY1RP25929 384 aa9.06□□□□□ -0.96
HLA-F-230ENST00000606273 HTR2BP41595 481 aa9.06□□□□□ -0.96
HLA-F-230ENST00000606273 PAX9P55771 341 aa9.06□□□□□ -0.96
HLA-F-230ENST00000606273 IL15RAQ13261 267 aa9.06□□□□□ -0.96
HLA-F-230ENST00000606273 UBAC2Q8NBM4 344 aa9.06□□□□□ -0.96
HLA-F-230ENST00000606273 SIGLEC8Q9NYZ4 499 aa9.06□□□□□ -0.96
HLA-F-230ENST00000606273 RCL1Q9Y2P8 373 aaKnown RBP9.06□□□□□ -0.96
HLA-F-230ENST00000606273 C7orf66A4D0T2 115 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 IZUMO1RA6ND01 250 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 SNRPGP15A8MWD9 76 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 H3BP45 60 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 CYB5BO43169 146 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 TGOLN2O43493 480 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 PRAF2O60831 178 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 GGCTO75223 188 aaKnown RBP9.05□□□□□ -0.96
HLA-F-230ENST00000606273 SCGB1D2O95969 90 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 IFNA10P01566 189 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 MBPP02686 304 aaPredicted RBP9.05□□□□□ -0.96
HLA-F-230ENST00000606273 ZP3P21754 424 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 NKX2-1P43699 371 aaPredicted RBP9.05□□□□□ -0.96
HLA-F-230ENST00000606273 SUB1P53999 127 aaKnown RBP eCLIP9.05□□□□□ -0.96
HLA-F-230ENST00000606273 TATDN3Q17R31 274 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 RPEL1Q2QD12 228 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 Q56UQ5 140 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 UNQ9165/PRO28630Q6UXU0 137 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 OVOL2Q9BRP0 275 aa9.05□□□□□ -0.96
HLA-F-230ENST00000606273 GPN1Q9HCN4 374 aaPredicted RBP9.05□□□□□ -0.96
HLA-F-230ENST00000606273 C5orf51A6NDU8 294 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 PRSS46E5RG02 174 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 GOSR2O14653 212 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 SSSCA1O60232 199 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 CCNKO75909 580 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 FCGR2BP31994 310 aaPredicted RBP9.04□□□□□ -0.96
HLA-F-230ENST00000606273 OPRK1P41145 380 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 DEFB125Q8N687 156 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 OR9G4Q8NGQ1 327 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 C11orf1Q9H5F2 150 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 CACFD1Q9UGQ2 172 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 ALG5Q9Y673 324 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 SELENOKQ9Y6D0 94 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 U3KQ87 197 aa9.04□□□□□ -0.96
HLA-F-230ENST00000606273 IGHV3OR16-8A0A075B7F1 116 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 A0A0J9YWU9 116 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 MED6O75586 246 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 CSN3P07498 182 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 MFAP4P55083 255 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 H2BFSP57053 126 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 CD81P60033 236 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 OXA1LQ15070 435 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 FAM209BQ5JX69 171 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 LCN12Q6JVE5 192 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 PRSS54Q6PEW0 395 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 LINC00336Q6ZUF6 198 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 GPHB5Q86YW7 130 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 RNASEH2CQ8TDP1 164 aaKnown RBP9.03□□□□□ -0.96
HLA-F-230ENST00000606273 BSCL2Q96G97 398 aaPredicted RBP9.03□□□□□ -0.96
HLA-F-230ENST00000606273 C2orf50Q96LR7 162 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 NEURL2Q9BR09 285 aa9.03□□□□□ -0.96
HLA-F-230ENST00000606273 ZNF436Q9C0F3 470 aaPredicted RBP9.03□□□□□ -0.96
HLA-F-230ENST00000606273 KRTAP23-1A1A580 65 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 PMS2P5A8MQ11 134 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 K7EPK0 472 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 CORTO00230 105 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 RAB32Q13637 225 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 RGS21Q2M5E4 152 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 SPANXN5Q5MJ07 72 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 GSG1LQ6UXU4 331 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 OR4X1Q8NH49 305 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 CACNG8Q8WXS5 425 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 ATP6V0BQ99437 205 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 TXN2Q99757 166 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 PSENENQ9NZ42 101 aa9.02□□□□□ -0.97
HLA-F-230ENST00000606273 PAIP2BQ9ULR5 123 aaKnown RBP9.02□□□□□ -0.97
HLA-F-230ENST00000606273 LSM5Q9Y4Y9 91 aaKnown RBP9.02□□□□□ -0.97
HLA-F-230ENST00000606273 ZNF320A2RRD8 509 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 TMEM213A2RRL7 107 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 LGALS9O00182 355 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 SSNA1O43805 119 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 GNG7O60262 68 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 CLN5O75503 358 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 IFNA4P05014 189 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 CD7P09564 240 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 CXCL3P19876 107 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 RND2P52198 227 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 TIGITQ495A1 244 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 SLC16A13Q7RTY0 426 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 NPIPB3Q92617 1050 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 SMIM8Q96KF7 97 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 CIB3Q96Q77 187 aaPredicted RBP9.01□□□□□ -0.97
HLA-F-230ENST00000606273 SRD5A3Q9H8P0 318 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 HSPG2P98160 4391 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 DNAH17Q9UFH2 4485 aa9.01□□□□□ -0.97
HLA-F-230ENST00000606273 MUC4Q99102 2169 aa9□□□□□ -0.97
HLA-F-230ENST00000606273 C2orf70A6NJV1 201 aa9□□□□□ -0.97
HLA-F-230ENST00000606273 A8MWP6 167 aa9□□□□□ -0.97
HLA-F-230ENST00000606273 OR11H12B2RN74 326 aa9□□□□□ -0.97
HLA-F-230ENST00000606273 H0YIZ8 118 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms