RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SCGB3A2Q96PL1 93 aa12.85□□□□□ -0.35
SHKBP1-227ENST00000602011 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
SHKBP1-227ENST00000602011 TEX48A0A1B0GUV7 120 aa12.84□□□□□ -0.35
SHKBP1-227ENST00000602011 C12orf74Q32Q52 190 aa12.84□□□□□ -0.35
SHKBP1-227ENST00000602011 SPATA31B1PQ5VZV4 182 aa12.84□□□□□ -0.35
SHKBP1-227ENST00000602011 SIGLEC15Q6ZMC9 328 aa12.84□□□□□ -0.35
SHKBP1-227ENST00000602011 SELENOHQ8IZQ5 122 aaKnown RBP12.84□□□□□ -0.35
SHKBP1-227ENST00000602011 OR4D10Q8NGI6 311 aa12.84□□□□□ -0.35
SHKBP1-227ENST00000602011 GPR146Q96CH1 333 aa12.84□□□□□ -0.35
SHKBP1-227ENST00000602011 RTBDNQ9BSG5 229 aaPredicted RBP12.84□□□□□ -0.35
SHKBP1-227ENST00000602011 CLEC5AQ9NY25 188 aa12.84□□□□□ -0.35
SHKBP1-227ENST00000602011 CACNG5Q9UF02 275 aa12.84□□□□□ -0.35
SHKBP1-227ENST00000602011 AGRNO00468 2067 aa12.84□□□□□ -0.35
SHKBP1-227ENST00000602011 DYNC1H1Q14204 4646 aaKnown RBP12.83□□□□□ -0.36
SHKBP1-227ENST00000602011 ZNF701M0R085 212 aaPredicted RBP12.83□□□□□ -0.36
SHKBP1-227ENST00000602011 FABP1P07148 127 aa12.83□□□□□ -0.36
SHKBP1-227ENST00000602011 SPART-AS1P0CW21 52 aa12.83□□□□□ -0.36
SHKBP1-227ENST00000602011 ID1P41134 155 aa12.83□□□□□ -0.36
SHKBP1-227ENST00000602011 RNASE12Q5GAN4 147 aaKnown RBP12.83□□□□□ -0.36
SHKBP1-227ENST00000602011 SAMD13Q5VXD3 122 aa12.83□□□□□ -0.36
SHKBP1-227ENST00000602011 OR8G2PQ6IF36 304 aa12.83□□□□□ -0.36
SHKBP1-227ENST00000602011 NPIPB3Q92617 1050 aa12.83□□□□□ -0.36
SHKBP1-227ENST00000602011 PRRT1Q99946 306 aa12.83□□□□□ -0.36
SHKBP1-227ENST00000602011 GPR132Q9UNW8 380 aa12.83□□□□□ -0.36
SHKBP1-227ENST00000602011 CRYM-AS1A6NIL9 109 aa12.82□□□□□ -0.36
SHKBP1-227ENST00000602011 SULT1A3P0DMM9 295 aa12.82□□□□□ -0.36
SHKBP1-227ENST00000602011 SULT1A4P0DMN0 295 aa12.82□□□□□ -0.36
SHKBP1-227ENST00000602011 HLA-DRB4P13762 266 aa12.82□□□□□ -0.36
SHKBP1-227ENST00000602011 USF2Q15853 346 aaPredicted RBP12.82□□□□□ -0.36
SHKBP1-227ENST00000602011 NMSQ5H8A3 153 aa12.82□□□□□ -0.36
SHKBP1-227ENST00000602011 C1orf194Q5T5A4 169 aa12.82□□□□□ -0.36
SHKBP1-227ENST00000602011 TMEM268Q5VZI3 342 aa12.82□□□□□ -0.36
SHKBP1-227ENST00000602011 OR51G1Q8NGK1 321 aa12.82□□□□□ -0.36
SHKBP1-227ENST00000602011 HLA-DRB4X5D2U9 266 aa12.82□□□□□ -0.36
SHKBP1-227ENST00000602011 CCDC160A6NGH7 325 aa12.81□□□□□ -0.36
SHKBP1-227ENST00000602011 IFNA10P01566 189 aa12.81□□□□□ -0.36
SHKBP1-227ENST00000602011 AKAIN1P0CW23 69 aa12.81□□□□□ -0.36
SHKBP1-227ENST00000602011 GPX4P36969 197 aaPredicted RBP12.81□□□□□ -0.36
SHKBP1-227ENST00000602011 KLF9Q13886 244 aaPredicted RBP12.81□□□□□ -0.36
SHKBP1-227ENST00000602011 ZNF705AQ6ZN79 300 aaPredicted RBP12.81□□□□□ -0.36
SHKBP1-227ENST00000602011 LHFPL5Q8TAF8 219 aa12.81□□□□□ -0.36
SHKBP1-227ENST00000602011 XCL2Q9UBD3 114 aa12.81□□□□□ -0.36
SHKBP1-227ENST00000602011 CTDSPLO15194 276 aa12.8□□□□□ -0.36
SHKBP1-227ENST00000602011 PSG1P11464 419 aa12.8□□□□□ -0.36
SHKBP1-227ENST00000602011 CCR6P51684 374 aa12.8□□□□□ -0.36
SHKBP1-227ENST00000602011 LGALS9BQ3B8N2 356 aa12.8□□□□□ -0.36
SHKBP1-227ENST00000602011 RNF125Q96EQ8 232 aa12.8□□□□□ -0.36
SHKBP1-227ENST00000602011 ACY3Q96HD9 319 aa12.8□□□□□ -0.36
SHKBP1-227ENST00000602011 RSL24D1Q9UHA3 163 aaKnown RBP12.8□□□□□ -0.36
SHKBP1-227ENST00000602011 ZNF705FA8MVS1 300 aaPredicted RBP12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 H3BMQ9 156 aa12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 RGS5O15539 181 aa12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 IFNA21P01568 189 aa12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 ZNF705DP0CH99 300 aaPredicted RBP12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 ZNF705BP0CI00 300 aaPredicted RBP12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 SPCS2Q15005 226 aa12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 FOXI2Q6ZQN5 318 aa12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 LGI3Q8N145 548 aa12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 SMIM4Q8WVI0 70 aa12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 SCP2D1Q9UJQ7 156 aa12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 CELA1Q9UNI1 258 aa12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 RFNGQ9Y644 331 aa12.79□□□□□ -0.36
SHKBP1-227ENST00000602011 ABCA13Q86UQ4 5058 aa12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 A0A0B4J2A0 478 aa12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 SNRPGP15A8MWD9 76 aa12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 CFDP00746 253 aaPredicted RBP12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 MED14OSP0DP75 135 aa12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 PSMB3P49720 205 aa12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 SRPXP78539 464 aa12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 OXA1LQ15070 435 aa12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 TMEM170AQ8WVE7 144 aa12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 RBM38Q9H0Z9 239 aaKnown RBP12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 SAV1Q9H4B6 383 aaPredicted RBP12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 HSPB7Q9UBY9 170 aa12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 SHPKQ9UHJ6 478 aa12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 DNAH11Q96DT5 4516 aa12.78□□□□□ -0.36
SHKBP1-227ENST00000602011 A0A1B0GVY2 172 aa12.77□□□□□ -0.37
SHKBP1-227ENST00000602011 NXPH3O95157 252 aa12.77□□□□□ -0.37
SHKBP1-227ENST00000602011 ANXA3P12429 323 aa12.77□□□□□ -0.37
SHKBP1-227ENST00000602011 S100A7P31151 101 aa12.77□□□□□ -0.37
SHKBP1-227ENST00000602011 SMCO1Q147U7 214 aa12.77□□□□□ -0.37
SHKBP1-227ENST00000602011 DYNC2LI1Q8TCX1 351 aa12.77□□□□□ -0.37
SHKBP1-227ENST00000602011 DTD1Q8TEA8 209 aa12.77□□□□□ -0.37
SHKBP1-227ENST00000602011 CCDC59Q9P031 241 aaKnown RBP12.77□□□□□ -0.37
SHKBP1-227ENST00000602011 ZFP92A6NM28 416 aa12.76□□□□□ -0.37
SHKBP1-227ENST00000602011 SUPT4H1P63272 117 aaKnown RBP12.76□□□□□ -0.37
SHKBP1-227ENST00000602011 RNF212Q495C1 297 aa12.76□□□□□ -0.37
SHKBP1-227ENST00000602011 OR4C16Q8NGL9 310 aa12.76□□□□□ -0.37
SHKBP1-227ENST00000602011 SLC35E1Q96K37 410 aa12.76□□□□□ -0.37
SHKBP1-227ENST00000602011 MIXL1Q9H2W2 232 aa12.76□□□□□ -0.37
SHKBP1-227ENST00000602011 GOLT1BQ9Y3E0 138 aa12.76□□□□□ -0.37
SHKBP1-227ENST00000602011 PRSS29PA6NIE9 313 aa12.75□□□□□ -0.37
SHKBP1-227ENST00000602011 ISLRO14498 428 aa12.75□□□□□ -0.37
SHKBP1-227ENST00000602011 AKR1C4P17516 323 aa12.75□□□□□ -0.37
SHKBP1-227ENST00000602011 MEOX2P50222 304 aa12.75□□□□□ -0.37
SHKBP1-227ENST00000602011 RAB11AP62491 216 aa12.75□□□□□ -0.37
SHKBP1-227ENST00000602011 SOHLH1Q5JUK2 328 aa12.75□□□□□ -0.37
SHKBP1-227ENST00000602011 EBLN2Q6P2I7 272 aa12.75□□□□□ -0.37
SHKBP1-227ENST00000602011 OR51S1Q8NGJ8 323 aa12.75□□□□□ -0.37
SHKBP1-227ENST00000602011 COQ8AQ8NI60 647 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms