RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 ZNF705EA8MWA4 302 aaPredicted RBP11.96□□□□□ -0.49
UPF1-206ENST00000598471 HAX1O00165 279 aa11.96□□□□□ -0.49
UPF1-206ENST00000598471 COX7A2P2O60397 106 aa11.96□□□□□ -0.49
UPF1-206ENST00000598471 LGALS1P09382 135 aaKnown RBP11.96□□□□□ -0.49
UPF1-206ENST00000598471 PSG1P11464 419 aa11.96□□□□□ -0.49
UPF1-206ENST00000598471 GATA2P23769 480 aaPredicted RBP11.96□□□□□ -0.49
UPF1-206ENST00000598471 RAB2AP61019 212 aa11.96□□□□□ -0.49
UPF1-206ENST00000598471 BLOC1S1P78537 153 aa11.96□□□□□ -0.49
UPF1-206ENST00000598471 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.49
UPF1-206ENST00000598471 S100A7AQ86SG5 101 aa11.96□□□□□ -0.49
UPF1-206ENST00000598471 OR10G4Q8NGN3 311 aa11.96□□□□□ -0.49
UPF1-206ENST00000598471 OR10G9Q8NGN4 311 aa11.96□□□□□ -0.49
UPF1-206ENST00000598471 OR10G7Q8NGN6 311 aa11.96□□□□□ -0.49
UPF1-206ENST00000598471 FAM213BQ8TBF2 198 aa11.96□□□□□ -0.49
UPF1-206ENST00000598471 WIPF2Q8TF74 440 aaPredicted RBP11.96□□□□□ -0.49
UPF1-206ENST00000598471 SAT2Q96F10 170 aaPredicted RBP11.96□□□□□ -0.49
UPF1-206ENST00000598471 PEF1Q9UBV8 284 aaKnown RBP11.96□□□□□ -0.49
UPF1-206ENST00000598471 ELOA3CA0A087WX78 387 aaPredicted RBP11.95□□□□□ -0.5
UPF1-206ENST00000598471 ANKRD34BA5PLL1 514 aa11.95□□□□□ -0.5
UPF1-206ENST00000598471 YIF1AO95070 293 aa11.95□□□□□ -0.5
UPF1-206ENST00000598471 S100A7P31151 101 aa11.95□□□□□ -0.5
UPF1-206ENST00000598471 ADMP35318 185 aa11.95□□□□□ -0.5
UPF1-206ENST00000598471 CDX1P47902 265 aaPredicted RBP11.95□□□□□ -0.5
UPF1-206ENST00000598471 LYZP61626 148 aa11.95□□□□□ -0.5
UPF1-206ENST00000598471 FOXL1Q12952 345 aa11.95□□□□□ -0.5
UPF1-206ENST00000598471 KIAA0141Q14154 515 aaPredicted RBP11.95□□□□□ -0.5
UPF1-206ENST00000598471 WFDC12Q8WWY7 111 aa11.95□□□□□ -0.5
UPF1-206ENST00000598471 RNF2Q99496 336 aa11.95□□□□□ -0.5
UPF1-206ENST00000598471 CHRDL1Q9BU40 450 aa11.95□□□□□ -0.5
UPF1-206ENST00000598471 ACTR3CQ9C0K3 210 aaPredicted RBP11.95□□□□□ -0.5
UPF1-206ENST00000598471 RPRMQ9NS64 109 aa11.95□□□□□ -0.5
UPF1-206ENST00000598471 NF1P21359 2839 aa11.95□□□□□ -0.5
UPF1-206ENST00000598471 JMJD1CQ15652 2540 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 A0A1W2PPV4 95 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 GGCTO75223 188 aaKnown RBP11.94□□□□□ -0.5
UPF1-206ENST00000598471 HYPMO75409 117 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 OR2C1O95371 312 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 OR5G3P0C626 314 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 PROK1P58294 105 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 PLP1P60201 277 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 RHOBP62745 196 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 FAM122CQ6P4D5 195 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 OR1B1Q8NGR6 318 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 GATAD1Q8WUU5 269 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 RNF125Q96EQ8 232 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 OR5B12Q96R08 314 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 DNAJC4Q9NNZ3 241 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 PLA2G2EQ9NZK7 142 aa11.94□□□□□ -0.5
UPF1-206ENST00000598471 NUDT19A8MXV4 375 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 PPP5D1E7EU14 171 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 TEX46H3BTG2 121 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 BMPR1BO00238 502 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 IL4P05112 153 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 ORM2P19652 201 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 CDC34P49427 236 aaPredicted RBP11.93□□□□□ -0.5
UPF1-206ENST00000598471 C10orf113Q5VZT2 155 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.93□□□□□ -0.5
UPF1-206ENST00000598471 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 MDFIQ99750 246 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 PBDC1Q9BVG4 233 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 MRPL32Q9BYC8 188 aaKnown RBP11.93□□□□□ -0.5
UPF1-206ENST00000598471 VSIRQ9H7M9 311 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 DOK5Q9P104 306 aa11.93□□□□□ -0.5
UPF1-206ENST00000598471 PUS1Q9Y606 427 aaKnown RBP eCLIP11.93□□□□□ -0.5
UPF1-206ENST00000598471 CTXND1A0A1B0GTU2 59 aa11.92□□□□□ -0.5
UPF1-206ENST00000598471 WI2-2373I1.2A0A1W2PRP0 233 aa11.92□□□□□ -0.5
UPF1-206ENST00000598471 SEC14L6B5MCN3 397 aa11.92□□□□□ -0.5
UPF1-206ENST00000598471 NDUFA4O00483 81 aa11.92□□□□□ -0.5
UPF1-206ENST00000598471 GCSAMLQ5JQS6 135 aa11.92□□□□□ -0.5
UPF1-206ENST00000598471 TCTEX1D4Q5JR98 221 aa11.92□□□□□ -0.5
UPF1-206ENST00000598471 CLLU1Q5K131 121 aa11.92□□□□□ -0.5
UPF1-206ENST00000598471 HIGD1AQ9Y241 93 aa11.92□□□□□ -0.5
UPF1-206ENST00000598471 TSSC4Q9Y5U2 329 aaPredicted RBP11.92□□□□□ -0.5
UPF1-206ENST00000598471 TRBV12-3P01733 135 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 HBE1P02100 147 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 HSPB1P04792 205 aaKnown RBP11.91□□□□□ -0.5
UPF1-206ENST00000598471 NMBP08949 121 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 H2AFB1P0C5Y9 115 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 CD28P10747 220 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 FHITP49789 147 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 TAS2R45P59539 299 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 KRTAP21-3Q3LHN1 58 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 FAM78BQ5VT40 261 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 RPP25LQ8N5L8 163 aaKnown RBP11.91□□□□□ -0.5
UPF1-206ENST00000598471 KLHL30-AS1Q8NEE0 82 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 RCC1LQ96I51 464 aaKnown RBP11.91□□□□□ -0.5
UPF1-206ENST00000598471 SLC25A22Q9H936 323 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 PFDN2Q9UHV9 154 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 RNF24Q9Y225 148 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 FUT9Q9Y231 359 aa11.91□□□□□ -0.5
UPF1-206ENST00000598471 IGHV3-35A0A0C4DH35 117 aa11.9□□□□□ -0.5
UPF1-206ENST00000598471 I3L521 148 aa11.9□□□□□ -0.5
UPF1-206ENST00000598471 ZP3P21754 424 aa11.9□□□□□ -0.5
UPF1-206ENST00000598471 RPEL1Q2QD12 228 aa11.9□□□□□ -0.5
UPF1-206ENST00000598471 KRTAP24-1Q3LI83 254 aa11.9□□□□□ -0.5
UPF1-206ENST00000598471 FAM106AQ4KMX7 169 aa11.9□□□□□ -0.5
UPF1-206ENST00000598471 TOMM20LQ6UXN7 152 aa11.9□□□□□ -0.5
UPF1-206ENST00000598471 DPF1Q92782 380 aa11.9□□□□□ -0.5
UPF1-206ENST00000598471 RAB24Q969Q5 203 aa11.9□□□□□ -0.5
UPF1-206ENST00000598471 RABAC1Q9UI14 185 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms