RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 UQCC3Q6UW78 93 aa16.16■□□□□ 0.18
PNKP-203ENST00000593946 PATE2Q6UY27 113 aa16.16■□□□□ 0.18
PNKP-203ENST00000593946 ATP6V0BQ99437 205 aa16.16■□□□□ 0.18
PNKP-203ENST00000593946 KLK15Q9H2R5 256 aa16.16■□□□□ 0.18
PNKP-203ENST00000593946 FUT9Q9Y231 359 aa16.16■□□□□ 0.18
PNKP-203ENST00000593946 CUBNO60494 3623 aa16.16■□□□□ 0.18
PNKP-203ENST00000593946 FAM181BA6NEQ2 426 aa16.15■□□□□ 0.18
PNKP-203ENST00000593946 COX7A2P2O60397 106 aa16.15■□□□□ 0.18
PNKP-203ENST00000593946 STAG3L2P0CL84 134 aa16.15■□□□□ 0.18
PNKP-203ENST00000593946 STAG3L3P0CL85 134 aa16.15■□□□□ 0.18
PNKP-203ENST00000593946 PF4V1P10720 104 aa16.15■□□□□ 0.18
PNKP-203ENST00000593946 ZNF329Q86UD4 541 aa16.15■□□□□ 0.18
PNKP-203ENST00000593946 USMG5Q96IX5 58 aa16.15■□□□□ 0.18
PNKP-203ENST00000593946 RNF2Q99496 336 aa16.15■□□□□ 0.18
PNKP-203ENST00000593946 GAR1Q9NY12 217 aaKnown RBP16.15■□□□□ 0.18
PNKP-203ENST00000593946 DOK5Q9P104 306 aa16.15■□□□□ 0.18
PNKP-203ENST00000593946 ELOA3CA0A087WX78 387 aaPredicted RBP16.14■□□□□ 0.17
PNKP-203ENST00000593946 TMEM89A2RUT3 159 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 SCGB2A1O75556 95 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 PSMB8P28062 276 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 GPR183P32249 361 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 ADMP35318 185 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 SRSF3P84103 164 aaKnown RBP16.14■□□□□ 0.17
PNKP-203ENST00000593946 C10orf113Q5VZT2 155 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 OR51G1Q8NGK1 321 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 ZNF418Q8TF45 676 aaPredicted RBP16.14■□□□□ 0.17
PNKP-203ENST00000593946 MRPL32Q9BYC8 188 aaKnown RBP16.14■□□□□ 0.17
PNKP-203ENST00000593946 ORM2P19652 201 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 PMS2P11Q13670 270 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 GUK1Q16774 197 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 Q71RC1 249 aaPredicted RBP16.14■□□□□ 0.17
PNKP-203ENST00000593946 MIR17HGQ75NE6 70 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 CHRDL1Q9BU40 450 aa16.14■□□□□ 0.17
PNKP-203ENST00000593946 ANKRD34BA5PLL1 514 aa16.13■□□□□ 0.17
PNKP-203ENST00000593946 NUPL2O15504 423 aaKnown RBP16.13■□□□□ 0.17
PNKP-203ENST00000593946 CLEC3BP05452 202 aa16.13■□□□□ 0.17
PNKP-203ENST00000593946 CD5P06127 495 aa16.13■□□□□ 0.17
PNKP-203ENST00000593946 RNASE1P07998 156 aaKnown RBP16.13■□□□□ 0.17
PNKP-203ENST00000593946 RAB9AP51151 201 aa16.13■□□□□ 0.17
PNKP-203ENST00000593946 HILS1P60008 231 aa16.13■□□□□ 0.17
PNKP-203ENST00000593946 OR1B1Q8NGR6 318 aa16.13■□□□□ 0.17
PNKP-203ENST00000593946 PBDC1Q9BVG4 233 aa16.13■□□□□ 0.17
PNKP-203ENST00000593946 SERTAD4Q9NUC0 356 aa16.13■□□□□ 0.17
PNKP-203ENST00000593946 F8P00451 2351 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 INAFM1C9JVW0 142 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 HYPMO75409 117 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 OR2C1O95371 312 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 ARL14EPLP0DKL9 152 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 RPL15P61313 204 aaKnown RBP16.12■□□□□ 0.17
PNKP-203ENST00000593946 LYZP61626 148 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 TOR2AQ5JU69 321 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 MORN5Q5VZ52 161 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 C10orf99Q6UWK7 81 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 CLEC19AQ6UXS0 136 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 UHRF2Q96PU4 802 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 TMPRSS5Q9H3S3 457 aa16.12■□□□□ 0.17
PNKP-203ENST00000593946 FN1P02751 2386 aaKnown RBP16.11■□□□□ 0.17
PNKP-203ENST00000593946 WI2-2373I1.2A0A1W2PRP0 233 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 I3L521 148 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 CXorf1O96002 111 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 LCNL1Q6ZST4 164 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 ZNF491Q8N8L2 437 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 ZNF414Q96IQ9 312 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 TMEM231Q9H6L2 316 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 TECRQ9NZ01 308 aaKnown RBP16.11■□□□□ 0.17
PNKP-203ENST00000593946 GNG13Q9P2W3 67 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 A0A0G2JLM5 398 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 RBFOX3A6NFN3 312 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 TGOLN2O43493 480 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 SLC35B1P78383 322 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 Q6ZSV7 163 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 LINC00305Q7Z4B0 112 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 Q8WTZ3 238 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 RNF125Q96EQ8 232 aa16.11■□□□□ 0.17
PNKP-203ENST00000593946 EIF5A2Q9GZV4 153 aaKnown RBP16.11■□□□□ 0.17
PNKP-203ENST00000593946 IL4P05112 153 aa16.1■□□□□ 0.17
PNKP-203ENST00000593946 C8orf88P0DMB2 117 aa16.1■□□□□ 0.17
PNKP-203ENST00000593946 PSMB3P49720 205 aa16.1■□□□□ 0.17
PNKP-203ENST00000593946 TAS2R45P59539 299 aa16.1■□□□□ 0.17
PNKP-203ENST00000593946 HAGHQ16775 308 aa16.1■□□□□ 0.17
PNKP-203ENST00000593946 TEX38Q6PEX7 206 aa16.1■□□□□ 0.17
PNKP-203ENST00000593946 RARRES2Q99969 163 aa16.1■□□□□ 0.17
PNKP-203ENST00000593946 MRPL27Q9P0M9 148 aaKnown RBP16.1■□□□□ 0.17
PNKP-203ENST00000593946 FOXE3Q13461 319 aa16.09■□□□□ 0.17
PNKP-203ENST00000593946 KHDC3LQ587J8 217 aa16.09■□□□□ 0.17
PNKP-203ENST00000593946 ZNF506Q5JVG8 444 aa16.09■□□□□ 0.17
PNKP-203ENST00000593946 ZNF600Q6ZNG1 722 aa16.09■□□□□ 0.17
PNKP-203ENST00000593946 FAM167A-AS1Q96KT0 104 aa16.09■□□□□ 0.17
PNKP-203ENST00000593946 TREM1Q9NP99 234 aa16.09■□□□□ 0.17
PNKP-203ENST00000593946 HIGD1AQ9Y241 93 aa16.09■□□□□ 0.17
PNKP-203ENST00000593946 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.08■□□□□ 0.17
PNKP-203ENST00000593946 ELANEP08246 267 aa16.08■□□□□ 0.17
PNKP-203ENST00000593946 BCL2P10415 239 aa16.08■□□□□ 0.17
PNKP-203ENST00000593946 PEA15Q15121 130 aa16.08■□□□□ 0.17
PNKP-203ENST00000593946 ZNF343Q6P1L6 599 aa16.08■□□□□ 0.17
PNKP-203ENST00000593946 PQLC2Q6ZP29 291 aa16.08■□□□□ 0.17
PNKP-203ENST00000593946 IQCF2Q8IXL9 164 aa16.08■□□□□ 0.17
PNKP-203ENST00000593946 ZNF503Q96F45 646 aa16.08■□□□□ 0.17
PNKP-203ENST00000593946 SLC25A2Q9BXI2 301 aa16.08■□□□□ 0.17
PNKP-203ENST00000593946 PUS1Q9Y606 427 aaKnown RBP eCLIP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms