RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 C2orf83Q53S99 150 aa13.45□□□□□ -0.26
CIRBP-235ENST00000591935 PPP1R27Q86WC6 154 aa13.45□□□□□ -0.26
CIRBP-235ENST00000591935 TEX45Q8NA69 505 aa13.45□□□□□ -0.26
CIRBP-235ENST00000591935 ACTR3CQ9C0K3 210 aaPredicted RBP13.45□□□□□ -0.26
CIRBP-235ENST00000591935 NPVFQ9HCQ7 196 aa13.45□□□□□ -0.26
CIRBP-235ENST00000591935 SLC39A9Q9NUM3 307 aa13.45□□□□□ -0.26
CIRBP-235ENST00000591935 TENM3Q9P273 2699 aa13.44□□□□□ -0.26
CIRBP-235ENST00000591935 DNASE2O00115 360 aaPredicted RBP13.44□□□□□ -0.26
CIRBP-235ENST00000591935 IFNA1P01562 189 aa13.44□□□□□ -0.26
CIRBP-235ENST00000591935 OPRK1P41145 380 aa13.44□□□□□ -0.26
CIRBP-235ENST00000591935 PPT1P50897 306 aa13.44□□□□□ -0.26
CIRBP-235ENST00000591935 ERHP84090 104 aaKnown RBP13.44□□□□□ -0.26
CIRBP-235ENST00000591935 PSG5Q15238 335 aa13.44□□□□□ -0.26
CIRBP-235ENST00000591935 BSXQ3C1V8 233 aa13.44□□□□□ -0.26
CIRBP-235ENST00000591935 TMEM170AQ8WVE7 144 aa13.44□□□□□ -0.26
CIRBP-235ENST00000591935 FAM103A1Q9BTL3 118 aaKnown RBP13.44□□□□□ -0.26
CIRBP-235ENST00000591935 COMMD5Q9GZQ3 224 aa13.44□□□□□ -0.26
CIRBP-235ENST00000591935 NDUFA4L2Q9NRX3 87 aa13.44□□□□□ -0.26
CIRBP-235ENST00000591935 ZNF256Q9Y2P7 627 aaPredicted RBP13.44□□□□□ -0.26
CIRBP-235ENST00000591935 LSM4Q9Y4Z0 139 aaKnown RBP13.44□□□□□ -0.26
CIRBP-235ENST00000591935 LOC102723971A0A1B0GUV8 181 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 LINC01619G3V211 115 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 OVOL1O14753 267 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 CA2P00918 260 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 IGLV2-23P01705 113 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 LGALS1P09382 135 aaKnown RBP13.43□□□□□ -0.26
CIRBP-235ENST00000591935 MAS1LP35410 378 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 RAB31Q13636 194 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 ZNF726P1Q15940 193 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 FFAR4Q5NUL3 377 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 ACSM6Q6P461 480 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 UNQ5815/PRO19632Q6UWF5 114 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 CLRN3Q8NCR9 226 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 OR10G9Q8NGN4 311 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 OR10G7Q8NGN6 311 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 PRR25Q96S07 402 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 VSIRQ9H7M9 311 aa13.43□□□□□ -0.26
CIRBP-235ENST00000591935 MAP1LC3B2A6NCE7 125 aa13.42□□□□□ -0.26
CIRBP-235ENST00000591935 SRP19P09132 144 aaKnown RBP13.42□□□□□ -0.26
CIRBP-235ENST00000591935 ICAM4Q14773 271 aa13.42□□□□□ -0.26
CIRBP-235ENST00000591935 RPP25LQ8N5L8 163 aaKnown RBP13.42□□□□□ -0.26
CIRBP-235ENST00000591935 ARPC1AQ92747 370 aa13.42□□□□□ -0.26
CIRBP-235ENST00000591935 WWC2-AS2Q96NR7 200 aa13.42□□□□□ -0.26
CIRBP-235ENST00000591935 MAP1LC3BQ9GZQ8 125 aa13.42□□□□□ -0.26
CIRBP-235ENST00000591935 TPSG1Q9NRR2 321 aa13.42□□□□□ -0.26
CIRBP-235ENST00000591935 GPX4P36969 197 aaPredicted RBP13.41□□□□□ -0.26
CIRBP-235ENST00000591935 ELLP55199 621 aaPredicted RBP13.41□□□□□ -0.26
CIRBP-235ENST00000591935 SOHLH1Q5JUK2 328 aa13.41□□□□□ -0.26
CIRBP-235ENST00000591935 MMD2Q8IY49 270 aa13.41□□□□□ -0.26
CIRBP-235ENST00000591935 CACNG8Q8WXS5 425 aa13.41□□□□□ -0.26
CIRBP-235ENST00000591935 RARRES2Q99969 163 aa13.41□□□□□ -0.26
CIRBP-235ENST00000591935 SLC25A17O43808 307 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 CNIH1O95406 144 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 CRYGBP07316 175 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 BCL2P10415 239 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 SUB1P53999 127 aaKnown RBP eCLIP13.4□□□□□ -0.264e-8■□□□□ 10.8
CIRBP-235ENST00000591935 TPPP2P59282 170 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 FXYD3Q14802 87 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 TEPPQ6URK8 271 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 LCN15Q6UWW0 184 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 DLX4Q92988 240 aaPredicted RBP13.4□□□□□ -0.26
CIRBP-235ENST00000591935 TMEM68Q96MH6 324 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 MS4A10Q96PG2 267 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 HINT2Q9BX68 163 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 VAX2Q9UIW0 290 aa13.4□□□□□ -0.26
CIRBP-235ENST00000591935 A0A1B0GV50 99 aa13.39□□□□□ -0.27
CIRBP-235ENST00000591935 H3BUA1 57 aa13.39□□□□□ -0.27
CIRBP-235ENST00000591935 SAP30O75446 220 aa13.39□□□□□ -0.27
CIRBP-235ENST00000591935 RNASE2P10153 161 aaKnown RBP13.39□□□□□ -0.27
CIRBP-235ENST00000591935 RPL29P47914 159 aaKnown RBP13.39□□□□□ -0.27
CIRBP-235ENST00000591935 NPBWR1P48145 328 aa13.39□□□□□ -0.27
CIRBP-235ENST00000591935 SLURP1P55000 103 aa13.39□□□□□ -0.27
CIRBP-235ENST00000591935 SSBP2P81877 361 aaPredicted RBP13.39□□□□□ -0.27
CIRBP-235ENST00000591935 HAGHQ16775 308 aa13.39□□□□□ -0.27
CIRBP-235ENST00000591935 TMEM144Q7Z5S9 345 aa13.39□□□□□ -0.27
CIRBP-235ENST00000591935 RNASEH2CQ8TDP1 164 aaKnown RBP13.39□□□□□ -0.27
CIRBP-235ENST00000591935 GGTLC1Q9BX51 225 aa13.39□□□□□ -0.27
CIRBP-235ENST00000591935 TNCP24821 2201 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 IGHV4OR15-8A0A075B7B6 117 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 A0A087WW49 117 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 A0A0G2JLM5 398 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 SMCO3A2RU48 225 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 IGHV3-11P01762 117 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 TRGV3P03979 118 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 MYOD1P15172 320 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 RXFP4Q8TDU9 374 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 MGST2Q99735 147 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 ZNF430Q9H8G1 570 aaPredicted RBP13.38□□□□□ -0.27
CIRBP-235ENST00000591935 MANBALQ9NQG1 85 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 ZNF355PQ9NSJ1 428 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 GNG13Q9P2W3 67 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 SMAD5-AS1Q9Y6J3 95 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 U3KQK5 164 aa13.38□□□□□ -0.27
CIRBP-235ENST00000591935 FAM74A7A6NL05 159 aa13.37□□□□□ -0.27
CIRBP-235ENST00000591935 OR13C7P0DN81 318 aa13.37□□□□□ -0.27
CIRBP-235ENST00000591935 CDC34P49427 236 aaPredicted RBP13.37□□□□□ -0.27
CIRBP-235ENST00000591935 PSMB3P49720 205 aa13.37□□□□□ -0.27
CIRBP-235ENST00000591935 RHEBQ15382 184 aa13.37□□□□□ -0.27
CIRBP-235ENST00000591935 PRSS8Q16651 343 aa13.37□□□□□ -0.27
CIRBP-235ENST00000591935 FAM74A3Q4VXF1 159 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms