RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 WWC2-AS2Q96NR7 200 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 RAB40CQ96S21 281 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 VSIRQ9H7M9 311 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 TBC1D24Q9ULP9 559 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 LSM5Q9Y4Y9 91 aaKnown RBP7.54□□□□□ -1.2
BRCA1-227ENST00000591849 LOC102724200A0A096LPH7 203 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-227ENST00000591849 HELTA6NFD8 242 aa7.53□□□□□ -1.2
BRCA1-227ENST00000591849 SNRPGP15A8MWD9 76 aa7.53□□□□□ -1.2
BRCA1-227ENST00000591849 IL5P05113 134 aa7.53□□□□□ -1.2
BRCA1-227ENST00000591849 PSG1P11464 419 aa7.53□□□□□ -1.2
BRCA1-227ENST00000591849 PVALBP20472 110 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-227ENST00000591849 CRYBB3P26998 211 aa7.53□□□□□ -1.2
BRCA1-227ENST00000591849 P2RY1P47900 373 aa7.53□□□□□ -1.2
BRCA1-227ENST00000591849 BCAP31P51572 246 aa7.53□□□□□ -1.2
BRCA1-227ENST00000591849 STXBP6Q8NFX7 210 aa7.53□□□□□ -1.2
BRCA1-227ENST00000591849 C2orf50Q96LR7 162 aa7.53□□□□□ -1.2
BRCA1-227ENST00000591849 GGTLC1Q9BX51 225 aa7.53□□□□□ -1.2
BRCA1-227ENST00000591849 RBMY1BA6NDE4 496 aaKnown RBP7.52□□□□□ -1.21
BRCA1-227ENST00000591849 RBMY1EA6NEQ0 496 aaKnown RBP7.52□□□□□ -1.21
BRCA1-227ENST00000591849 INMT-MINDY4F8WBC2 141 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 RBMY1DP0C7P1 496 aaKnown RBP7.52□□□□□ -1.21
BRCA1-227ENST00000591849 NUP62P37198 522 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-227ENST00000591849 AP2S1P53680 142 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-227ENST00000591849 TAS2R30P59541 319 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 S100A10P60903 97 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 LYZP61626 148 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 LILRB2Q8N423 598 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 OR10P1Q8NGE3 313 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 RNF125Q96EQ8 232 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 ZNF414Q96IQ9 312 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 TRGV9Q99603 122 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 TM2D3Q9BRN9 247 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 MS4A6AQ9H2W1 248 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 MGAT4CQ9UBM8 478 aa7.52□□□□□ -1.21
BRCA1-227ENST00000591849 RCL1Q9Y2P8 373 aaKnown RBP7.52□□□□□ -1.21
BRCA1-227ENST00000591849 PRAF2O60831 178 aa7.51□□□□□ -1.21
BRCA1-227ENST00000591849 CFDP00746 253 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-227ENST00000591849 MBPP02686 304 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-227ENST00000591849 METTL15P1P0C7V9 234 aa7.51□□□□□ -1.21
BRCA1-227ENST00000591849 RPL35AP18077 110 aaKnown RBP7.51□□□□□ -1.21
BRCA1-227ENST00000591849 S100A7P31151 101 aa7.51□□□□□ -1.21
BRCA1-227ENST00000591849 APOC4P55056 127 aa7.51□□□□□ -1.21
BRCA1-227ENST00000591849 RRAS2P62070 204 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-227ENST00000591849 ZNF90Q03938 601 aa7.51□□□□□ -1.21
BRCA1-227ENST00000591849 USF2Q15853 346 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-227ENST00000591849 FAM90A2PQ658T7 463 aa7.51□□□□□ -1.21
BRCA1-227ENST00000591849 BPIFCQ8NFQ6 507 aa7.51□□□□□ -1.21
BRCA1-227ENST00000591849 STAB2Q8WWQ8 2551 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 TRAV2A0A0B4J234 112 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 TSC22D2O75157 780 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 RLN2P04090 185 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 CAV2P51636 162 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 DEFB131AP59861 70 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 DLK1P80370 383 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 IFITM3Q01628 133 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 ODF3L2Q3SX64 289 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 C16orf54Q6UWD8 224 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 ACOT7LQ6ZUV0 252 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 TMEM144Q7Z5S9 345 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 NRARPQ7Z6K4 114 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 APRG1Q8IVJ8 170 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 STPG3Q8N7X2 389 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 THAP8Q8NA92 274 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 FAM110AQ9BQ89 295 aa7.5□□□□□ -1.21
BRCA1-227ENST00000591849 IGKV1D-37A0A075B6S9 117 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 C7orf66A4D0T2 115 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 K7EPK0 472 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 GOSR2O14653 212 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 SSNA1O43805 119 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 ORM2P19652 201 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 PAX9P55771 341 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 TMEM14EPQ6UXP3 125 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 SIGLEC15Q6ZMC9 328 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 LINC00322Q6ZN03 302 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-227ENST00000591849 CITED4Q96RK1 184 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 TMEM147Q9BVK8 224 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 MAP6D1Q9H9H5 199 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 NPVFQ9HCQ7 196 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 RETNQ9HD89 108 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 FBXL17Q9UF56 701 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 U3KQE9 123 aa7.49□□□□□ -1.21
BRCA1-227ENST00000591849 FAM24AA6NFZ4 105 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 PRSS46E5RG02 174 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 UBE2CO00762 179 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 BUB3O43684 328 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 CCNKO75909 580 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 SIX6O95475 246 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 ZNF688P0C7X2 276 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 GATA2P23769 480 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-227ENST00000591849 RAP2BP61225 183 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 SNRPD3P62318 126 aaKnown RBP7.48□□□□□ -1.21
BRCA1-227ENST00000591849 SELENOTP62341 195 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 CYCSP99999 105 aaKnown RBP7.48□□□□□ -1.21
BRCA1-227ENST00000591849 RAB31Q13636 194 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 RYR3Q15413 4870 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 LEMD1Q68G75 181 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 CYP2G1PQ6ZSU1 146 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 S100A7AQ86SG5 101 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 STHQ8IWL8 128 aa7.48□□□□□ -1.21
BRCA1-227ENST00000591849 OR8I2Q8N0Y5 310 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms