RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 ZNF90Q03938 601 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 FAM78BQ5VT40 261 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 BRD3OSQ6XYD6 125 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 PQLC2Q6ZP29 291 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 C5orf56Q8N8D9 126 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 OR1L4Q8NGR5 311 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 OR4X1Q8NH49 305 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 PIFOQ8TCI5 191 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 ZNF503Q96F45 646 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 FAM167A-AS1Q96KT0 104 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 FANCD2OSQ96PS1 177 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 PFDN5Q99471 154 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 FAM103A1Q9BTL3 118 aaKnown RBP7.39□□□□□ -1.23
VPS25-205ENST00000590339 TNFRSF19Q9NS68 423 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 TECRQ9NZ01 308 aaKnown RBP7.39□□□□□ -1.23
VPS25-205ENST00000590339 A0A0U1RQK1 487 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 MDFIC2A0A1B0GVS7 189 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 NCBP2LA6PVI3 153 aaKnown RBP7.38□□□□□ -1.23
VPS25-205ENST00000590339 C11orf94C9JXX5 98 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 F6UZH7 168 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 C8orf88P0DMB2 117 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 ATP5G3P48201 142 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 CRIP2P52943 208 aaPredicted RBP7.38□□□□□ -1.23
VPS25-205ENST00000590339 TAS2R45P59539 299 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 PNRC1Q12796 327 aaPredicted RBP7.38□□□□□ -1.23
VPS25-205ENST00000590339 TMEM88Q6PEY1 159 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 PATE2Q6UY27 113 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 IQCF2Q8IXL9 164 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 C3orf56Q8N813 242 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 FAM110DQ8TAY7 271 aaPredicted RBP7.38□□□□□ -1.23
VPS25-205ENST00000590339 C11orf52Q96A22 123 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 TVP23CQ96ET8 276 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 RBM14Q96PK6 669 aaKnown RBP7.38□□□□□ -1.23
VPS25-205ENST00000590339 HSPB9Q9BQS6 159 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 NIPSNAP3BQ9BS92 247 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 SLC25A2Q9BXI2 301 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 TMEM167BQ9NRX6 74 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 MOB4Q9Y3A3 225 aa7.38□□□□□ -1.23
VPS25-205ENST00000590339 YTHDF2Q9Y5A9 579 aaKnown RBP7.38□□□□□ -1.23
VPS25-205ENST00000590339 PUS1Q9Y606 427 aaKnown RBP eCLIP7.38□□□□□ -1.23
VPS25-205ENST00000590339 MXRA5Q9NR99 2828 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 A0A087WWC5 75 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 IGHV3-21A0A0B4J1V1 117 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 TMEM89A2RUT3 159 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 DNAJC9-AS1A6NH13 148 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 F8W735 103 aaPredicted RBP7.37□□□□□ -1.23
VPS25-205ENST00000590339 M0R036 132 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 NUPL2O15504 423 aaKnown RBP7.37□□□□□ -1.23
VPS25-205ENST00000590339 PDE6DO43924 150 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 COX7A2P2O60397 106 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 CLN5O75503 358 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 IGKV1-17P01599 117 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 NPPCP23582 126 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 C19orf54Q5BKX5 351 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 MORN5Q5VZ52 161 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.37□□□□□ -1.23
VPS25-205ENST00000590339 OR4F5Q8NH21 305 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 SGMS2Q8NHU3 365 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 YPEL4Q96NS1 127 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 OR4F4Q96R69 305 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 RASL11BQ9BPW5 248 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 PARLQ9H300 379 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 TUBA4BQ9H853 241 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 SDF2L1Q9HCN8 221 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 DNAJC4Q9NNZ3 241 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 RPS10P5Q9NQ39 176 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 SMCO4Q9NRQ5 59 aa7.37□□□□□ -1.23
VPS25-205ENST00000590339 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
VPS25-205ENST00000590339 ELOA3CA0A087WX78 387 aaPredicted RBP7.36□□□□□ -1.23
VPS25-205ENST00000590339 A6NDX4 124 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 B4DEV8 164 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 ATP6V0E1O15342 81 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 AMY1AP04745 511 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 HIST1H1BP16401 226 aaKnown RBP7.36□□□□□ -1.23
VPS25-205ENST00000590339 FCGR2BP31994 310 aaPredicted RBP7.36□□□□□ -1.23
VPS25-205ENST00000590339 CEBPGP53567 150 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 UBE2G2P60604 165 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 DEFB112Q30KQ8 113 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 C10orf113Q5VZT2 155 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 TMEM68Q96MH6 324 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 SMIM7Q9BQ49 75 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 C20orf24Q9BUV8 137 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 ZNF355PQ9NSJ1 428 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 NAT8Q9UHE5 227 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 STAB1Q9NY15 2570 aa7.36□□□□□ -1.23
VPS25-205ENST00000590339 ZNF727A8MUV8 499 aa7.35□□□□□ -1.23
VPS25-205ENST00000590339 HOXA3O43365 443 aaPredicted RBP7.35□□□□□ -1.23
VPS25-205ENST00000590339 OR7C2O60412 319 aa7.35□□□□□ -1.23
VPS25-205ENST00000590339 TOMM40O96008 361 aa7.35□□□□□ -1.23
VPS25-205ENST00000590339 AKR1C3P42330 323 aa7.35□□□□□ -1.23
VPS25-205ENST00000590339 TIGITQ495A1 244 aa7.35□□□□□ -1.23
VPS25-205ENST00000590339 C15orf54Q8N8G6 183 aa7.35□□□□□ -1.23
VPS25-205ENST00000590339 OR5AU1Q8NGC0 362 aa7.35□□□□□ -1.23
VPS25-205ENST00000590339 RPUSD4Q96CM3 377 aaKnown RBP7.35□□□□□ -1.23
VPS25-205ENST00000590339 DOK5Q9P104 306 aa7.35□□□□□ -1.23
VPS25-205ENST00000590339 TRAV30A0A087WSZ9 112 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 TRBV9A0A0B4J1U6 114 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 TRAV5A0A0B4J249 113 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 SCO2A0A1W2PP80 73 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 A0A1W2PRE2 83 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms