RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 FCN2Q15485 313 aa16.15■□□□□ 0.18
RETREG3-204ENST00000586796 LAMTOR1Q6IAA8 161 aa16.15■□□□□ 0.18
RETREG3-204ENST00000586796 OR51G1Q8NGK1 321 aa16.15■□□□□ 0.18
RETREG3-204ENST00000586796 PPP1R1CQ8WVI7 109 aa16.15■□□□□ 0.18
RETREG3-204ENST00000586796 RNF2Q99496 336 aa16.15■□□□□ 0.18
RETREG3-204ENST00000586796 TRGV9Q99603 122 aa16.15■□□□□ 0.18
RETREG3-204ENST00000586796 PBDC1Q9BVG4 233 aa16.15■□□□□ 0.18
RETREG3-204ENST00000586796 LYRM2Q9NU23 88 aaPredicted RBP16.15■□□□□ 0.18
RETREG3-204ENST00000586796 IGSF23A1L1A6 192 aa16.14■□□□□ 0.17
RETREG3-204ENST00000586796 USF2Q15853 346 aaPredicted RBP16.14■□□□□ 0.17
RETREG3-204ENST00000586796 TMEM144Q7Z5S9 345 aa16.14■□□□□ 0.17
RETREG3-204ENST00000586796 GTSCR1Q86UQ5 136 aa16.14■□□□□ 0.17
RETREG3-204ENST00000586796 TMEM252Q8N6L7 170 aa16.14■□□□□ 0.17
RETREG3-204ENST00000586796 IGKV3-7A0A075B6H7 116 aa16.13■□□□□ 0.17
RETREG3-204ENST00000586796 H0YIZ8 118 aa16.13■□□□□ 0.17
RETREG3-204ENST00000586796 BMI1P35226 326 aa16.13■□□□□ 0.17
RETREG3-204ENST00000586796 LYZP61626 148 aa16.13■□□□□ 0.17
RETREG3-204ENST00000586796 SLC38A11Q08AI6 406 aa16.13■□□□□ 0.17
RETREG3-204ENST00000586796 LILRB2Q8N423 598 aa16.13■□□□□ 0.17
RETREG3-204ENST00000586796 OR11H7Q8NGC8 314 aa16.13■□□□□ 0.17
RETREG3-204ENST00000586796 RNF125Q96EQ8 232 aa16.13■□□□□ 0.17
RETREG3-204ENST00000586796 NARS2Q96I59 477 aaKnown RBP16.13■□□□□ 0.17
RETREG3-204ENST00000586796 LSM4Q9Y4Z0 139 aaKnown RBP16.13■□□□□ 0.17
RETREG3-204ENST00000586796 TRAV25A0A0B4J276 109 aa16.12■□□□□ 0.17
RETREG3-204ENST00000586796 E5RGE8 158 aa16.12■□□□□ 0.17
RETREG3-204ENST00000586796 HNRNPCP07910 306 aaKnown RBP eCLIP16.12■□□□□ 0.172e-12■■■■□ 20
RETREG3-204ENST00000586796 CD7P09564 240 aa16.12■□□□□ 0.17
RETREG3-204ENST00000586796 GATA2P23769 480 aaPredicted RBP16.12■□□□□ 0.17
RETREG3-204ENST00000586796 CRYBB3P26998 211 aa16.12■□□□□ 0.17
RETREG3-204ENST00000586796 SULT1A1P50225 295 aa16.12■□□□□ 0.17
RETREG3-204ENST00000586796 CD81P60033 236 aa16.12■□□□□ 0.17
RETREG3-204ENST00000586796 STX12Q86Y82 276 aa16.12■□□□□ 0.17
RETREG3-204ENST00000586796 VSIRQ9H7M9 311 aa16.12■□□□□ 0.17
RETREG3-204ENST00000586796 NPVFQ9HCQ7 196 aa16.12■□□□□ 0.17
RETREG3-204ENST00000586796 RABAC1Q9UI14 185 aa16.12■□□□□ 0.17
RETREG3-204ENST00000586796 SMAD5-AS1Q9Y6J3 95 aa16.12■□□□□ 0.17
RETREG3-204ENST00000586796 A0A1W2PS18 150 aa16.11■□□□□ 0.17
RETREG3-204ENST00000586796 MPC2O95563 127 aa16.11■□□□□ 0.17
RETREG3-204ENST00000586796 RPL11P62913 178 aaKnown RBP16.11■□□□□ 0.17
RETREG3-204ENST00000586796 TMEM182Q6ZP80 229 aaPredicted RBP16.11■□□□□ 0.17
RETREG3-204ENST00000586796 TCF24Q7RTU0 167 aa16.11■□□□□ 0.17
RETREG3-204ENST00000586796 Q8N1Y9 231 aa16.11■□□□□ 0.17
RETREG3-204ENST00000586796 NEURL2Q9BR09 285 aa16.11■□□□□ 0.17
RETREG3-204ENST00000586796 GGACTQ9BVM4 153 aa16.11■□□□□ 0.17
RETREG3-204ENST00000586796 TMEM231Q9H6L2 316 aa16.11■□□□□ 0.17
RETREG3-204ENST00000586796 DFFBO76075 338 aa16.1■□□□□ 0.17
RETREG3-204ENST00000586796 P2RY1P47900 373 aa16.1■□□□□ 0.17
RETREG3-204ENST00000586796 TFPI2P48307 235 aa16.1■□□□□ 0.17
RETREG3-204ENST00000586796 CYP2G1PQ6ZSU1 146 aa16.1■□□□□ 0.17
RETREG3-204ENST00000586796 GBGT1Q8N5D6 347 aa16.1■□□□□ 0.17
RETREG3-204ENST00000586796 FNDC10F2Z333 226 aa16.09■□□□□ 0.17
RETREG3-204ENST00000586796 TSPAN4O14817 238 aa16.09■□□□□ 0.17
RETREG3-204ENST00000586796 PET100P0DJ07 73 aa16.09■□□□□ 0.17
RETREG3-204ENST00000586796 EWSR1Q01844 656 aaKnown RBP eCLIP16.09■□□□□ 0.17
RETREG3-204ENST00000586796 NHLH2Q02577 135 aa16.09■□□□□ 0.17
RETREG3-204ENST00000586796 TEPPQ6URK8 271 aa16.09■□□□□ 0.17
RETREG3-204ENST00000586796 BPIFCQ8NFQ6 507 aa16.09■□□□□ 0.17
RETREG3-204ENST00000586796 GRAMD2BQ96HH9 432 aa16.09■□□□□ 0.17
RETREG3-204ENST00000586796 SPAG8Q99932 426 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-204ENST00000586796 RNF126Q9BV68 326 aa16.09■□□□□ 0.17
RETREG3-204ENST00000586796 SLC25A31Q9H0C2 315 aa16.09■□□□□ 0.17
RETREG3-204ENST00000586796 S100A11P31949 105 aa16.08■□□□□ 0.16
RETREG3-204ENST00000586796 HBG1P69891 147 aa16.08■□□□□ 0.16
RETREG3-204ENST00000586796 HBG2P69892 147 aa16.08■□□□□ 0.16
RETREG3-204ENST00000586796 FAM90A2PQ658T7 463 aa16.08■□□□□ 0.16
RETREG3-204ENST00000586796 WFDC3Q8IUB2 231 aa16.08■□□□□ 0.16
RETREG3-204ENST00000586796 PPP1R14BQ96C90 147 aa16.08■□□□□ 0.16
RETREG3-204ENST00000586796 MBD2Q9UBB5 411 aa16.08■□□□□ 0.16
RETREG3-204ENST00000586796 U3KQE9 123 aa16.08■□□□□ 0.16
RETREG3-204ENST00000586796 SORL1Q92673 2214 aa16.07■□□□□ 0.16
RETREG3-204ENST00000586796 ORM2P19652 201 aa16.07■□□□□ 0.16
RETREG3-204ENST00000586796 EIF2B2P49770 351 aaKnown RBP16.07■□□□□ 0.16
RETREG3-204ENST00000586796 WFDC10AQ9H1F0 79 aa16.07■□□□□ 0.16
RETREG3-204ENST00000586796 UQCC1Q9NVA1 299 aa16.07■□□□□ 0.16
RETREG3-204ENST00000586796 DOK5Q9P104 306 aa16.07■□□□□ 0.16
RETREG3-204ENST00000586796 UBE2L5PA0A1B0GUS4 154 aa16.06■□□□□ 0.16
RETREG3-204ENST00000586796 CFDP00746 253 aaPredicted RBP16.06■□□□□ 0.16
RETREG3-204ENST00000586796 IGHV4-30-4P0DP06 118 aa16.06■□□□□ 0.16
RETREG3-204ENST00000586796 OR1B1Q8NGR6 318 aa16.06■□□□□ 0.16
RETREG3-204ENST00000586796 TMEM147Q9BVK8 224 aa16.06■□□□□ 0.16
RETREG3-204ENST00000586796 UBQLN2Q9UHD9 624 aa16.06■□□□□ 0.16
RETREG3-204ENST00000586796 OR4C46A6NHA9 309 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 OR11H12B2RN74 326 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 DNASE2O00115 360 aaPredicted RBP16.05■□□□□ 0.16
RETREG3-204ENST00000586796 AGPAT2O15120 278 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 CD5P06127 495 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 PAFAH1B2P68402 229 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 C16orf54Q6UWD8 224 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 DEFB125Q8N687 156 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 OR5C1Q8NGR4 320 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 THAP6Q8TBB0 222 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 MGST2Q99735 147 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 MS4A6AQ9H2W1 248 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 TUBA4BQ9H853 241 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 PFDN2Q9UHV9 154 aa16.05■□□□□ 0.16
RETREG3-204ENST00000586796 BUB3O43684 328 aa16.04■□□□□ 0.16
RETREG3-204ENST00000586796 LINC00869P0C866 280 aa16.04■□□□□ 0.16
RETREG3-204ENST00000586796 BAXQ07812 192 aa16.04■□□□□ 0.16
RETREG3-204ENST00000586796 ATP6V1FQ16864 119 aa16.04■□□□□ 0.16
RETREG3-204ENST00000586796 STXBP6Q8NFX7 210 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms