RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 SCRT1Q9BWW7 348 aa9.55□□□□□ -0.88
ERCC2-207ENST00000586441 NPCDR1Q9BY65 106 aa9.55□□□□□ -0.88
ERCC2-207ENST00000586441 ACTR3CQ9C0K3 210 aaPredicted RBP9.55□□□□□ -0.88
ERCC2-207ENST00000586441 SLC39A9Q9NUM3 307 aa9.55□□□□□ -0.88
ERCC2-207ENST00000586441 RFNGQ9Y644 331 aa9.55□□□□□ -0.88
ERCC2-207ENST00000586441 DNAH3Q8TD57 4116 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 CTXND1A0A1B0GTU2 59 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 WI2-2373I1.2A0A1W2PRP0 233 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 SEC14L6B5MCN3 397 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 CYB5BO43169 146 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 ADCYAP1P18509 176 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 HOXD3P31249 432 aaPredicted RBP9.54□□□□□ -0.88
ERCC2-207ENST00000586441 MAS1LP35410 378 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 PPT1P50897 306 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 GNB1P62873 340 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 MRGPRG-AS1Q2M3A8 158 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 C2orf83Q53S99 150 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 KHDC3LQ587J8 217 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 ZNF506Q5JVG8 444 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 FFAR4Q5NUL3 377 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 MMD2Q8IY49 270 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 HINT2Q9BX68 163 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 NPVFQ9HCQ7 196 aa9.54□□□□□ -0.88
ERCC2-207ENST00000586441 SMCO3A2RU48 225 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 MAP1LC3B2A6NCE7 125 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 PRSS46E5RG02 174 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 OVOL1O14753 267 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 NDUFS6O75380 124 aaKnown RBP9.53□□□□□ -0.88
ERCC2-207ENST00000586441 ACTL6BO94805 426 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 TRGV3P03979 118 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 OPRK1P41145 380 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 SUB1P53999 127 aaKnown RBP eCLIP9.53□□□□□ -0.88
ERCC2-207ENST00000586441 ELLP55199 621 aaPredicted RBP9.53□□□□□ -0.88
ERCC2-207ENST00000586441 TPPP2P59282 170 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 BTN1A1Q13410 526 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 FAM209BQ5JX69 171 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 MAP1LC3BQ9GZQ8 125 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 NDUFA4L2Q9NRX3 87 aa9.53□□□□□ -0.88
ERCC2-207ENST00000586441 A0A1B0GV50 99 aa9.52□□□□□ -0.89
ERCC2-207ENST00000586441 CCL20P78556 96 aa9.52□□□□□ -0.89
ERCC2-207ENST00000586441 GUCA2BQ16661 112 aa9.52□□□□□ -0.89
ERCC2-207ENST00000586441 BSXQ3C1V8 233 aa9.52□□□□□ -0.89
ERCC2-207ENST00000586441 DEFB121Q5J5C9 76 aa9.52□□□□□ -0.89
ERCC2-207ENST00000586441 ACSM6Q6P461 480 aa9.52□□□□□ -0.89
ERCC2-207ENST00000586441 OR10G4Q8NGN3 311 aa9.52□□□□□ -0.89
ERCC2-207ENST00000586441 OR10G9Q8NGN4 311 aa9.52□□□□□ -0.89
ERCC2-207ENST00000586441 OR10G7Q8NGN6 311 aa9.52□□□□□ -0.89
ERCC2-207ENST00000586441 SRSF12Q8WXF0 261 aaKnown RBP9.52□□□□□ -0.89
ERCC2-207ENST00000586441 DLX4Q92988 240 aaPredicted RBP9.52□□□□□ -0.89
ERCC2-207ENST00000586441 LOC102723971A0A1B0GUV8 181 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 C9JQL5 133 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 GPX4P36969 197 aaPredicted RBP9.51□□□□□ -0.89
ERCC2-207ENST00000586441 ZNF726P1Q15940 193 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 SOHLH1Q5JUK2 328 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 ZNF343Q6P1L6 599 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 TEPPQ6URK8 271 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 ATRAIDQ6UW56 229 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 LCN15Q6UWW0 184 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 TTC9CQ8N5M4 171 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 OR5T1Q8NG75 326 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 TMEM170AQ8WVE7 144 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 CACNG8Q8WXS5 425 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 MS4A10Q96PG2 267 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 OR5B12Q96R08 314 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 B9D2Q9BPU9 175 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 VSIRQ9H7M9 311 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 ZNF430Q9H8G1 570 aaPredicted RBP9.51□□□□□ -0.89
ERCC2-207ENST00000586441 ZNF355PQ9NSJ1 428 aa9.51□□□□□ -0.89
ERCC2-207ENST00000586441 LSM4Q9Y4Z0 139 aaKnown RBP9.51□□□□□ -0.89
ERCC2-207ENST00000586441 IGHV4OR15-8A0A075B7B6 117 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 A0A087WW49 117 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 TRBV9A0A0B4J1U6 114 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 A0A1W2PPV4 95 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 FAM223BA6NKX1 122 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
ERCC2-207ENST00000586441 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
ERCC2-207ENST00000586441 BCL2P10415 239 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 ICAM4Q14773 271 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 TNXAQ16473 311 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 HAGHQ16775 308 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 KLK9Q2XQG4 91 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 FAM223AQ8IWN6 122 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 RPP25LQ8N5L8 163 aaKnown RBP9.5□□□□□ -0.89
ERCC2-207ENST00000586441 CLRN3Q8NCR9 226 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 RNASEH2CQ8TDP1 164 aaKnown RBP9.5□□□□□ -0.89
ERCC2-207ENST00000586441 GGTLC1Q9BX51 225 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 MANBALQ9NQG1 85 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 GNG13Q9P2W3 67 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 VAX2Q9UIW0 290 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 KLK9Q9UKQ9 250 aa9.5□□□□□ -0.89
ERCC2-207ENST00000586441 ZNF256Q9Y2P7 627 aaPredicted RBP9.5□□□□□ -0.89
ERCC2-207ENST00000586441 DNASE2O00115 360 aaPredicted RBP9.49□□□□□ -0.89
ERCC2-207ENST00000586441 SRP19P09132 144 aaKnown RBP9.49□□□□□ -0.89
ERCC2-207ENST00000586441 RPL29P47914 159 aaKnown RBP9.49□□□□□ -0.89
ERCC2-207ENST00000586441 CDC34P49427 236 aaPredicted RBP9.49□□□□□ -0.89
ERCC2-207ENST00000586441 KLF5Q13887 457 aaPredicted RBP9.49□□□□□ -0.89
ERCC2-207ENST00000586441 FAM122CQ6P4D5 195 aa9.49□□□□□ -0.89
ERCC2-207ENST00000586441 TMEM144Q7Z5S9 345 aa9.49□□□□□ -0.89
ERCC2-207ENST00000586441 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.49□□□□□ -0.89
ERCC2-207ENST00000586441 RXFP4Q8TDU9 374 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms