RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 ZNF727A8MUV8 499 aa22.82■■□□□ 1.24
CTDNEP1-208ENST00000573600 PNRC1Q12796 327 aaPredicted RBP22.82■■□□□ 1.24
CTDNEP1-208ENST00000573600 Q56UQ5 140 aa22.82■■□□□ 1.24
CTDNEP1-208ENST00000573600 MORN5Q5VZ52 161 aa22.82■■□□□ 1.24
CTDNEP1-208ENST00000573600 STXBP6Q8NFX7 210 aa22.82■■□□□ 1.24
CTDNEP1-208ENST00000573600 OR51G1Q8NGK1 321 aa22.82■■□□□ 1.24
CTDNEP1-208ENST00000573600 UHRF2Q96PU4 802 aa22.82■■□□□ 1.24
CTDNEP1-208ENST00000573600 C20orf24Q9BUV8 137 aa22.82■■□□□ 1.24
CTDNEP1-208ENST00000573600 TRBV9A0A0B4J1U6 114 aa22.81■■□□□ 1.24
CTDNEP1-208ENST00000573600 TRAV5A0A0B4J249 113 aa22.81■■□□□ 1.24
CTDNEP1-208ENST00000573600 G3V318 75 aa22.81■■□□□ 1.24
CTDNEP1-208ENST00000573600 C9orf152Q5JTZ5 239 aa22.81■■□□□ 1.24
CTDNEP1-208ENST00000573600 HIGD1AQ9Y241 93 aa22.81■■□□□ 1.24
CTDNEP1-208ENST00000573600 YTHDF2Q9Y5A9 579 aaKnown RBP22.81■■□□□ 1.24
CTDNEP1-208ENST00000573600 CENPEQ02224 2701 aa22.81■■□□□ 1.24
CTDNEP1-208ENST00000573600 FASNP49327 2511 aaKnown RBP22.8■■□□□ 1.24
CTDNEP1-208ENST00000573600 TRAV41A0A0B4J266 112 aa22.8■■□□□ 1.24
CTDNEP1-208ENST00000573600 IGHG2P01859 326 aa22.8■■□□□ 1.24
CTDNEP1-208ENST00000573600 BCL6BQ8N143 479 aaPredicted RBP22.8■■□□□ 1.24
CTDNEP1-208ENST00000573600 SMIM7Q9BQ49 75 aa22.8■■□□□ 1.24
CTDNEP1-208ENST00000573600 MDFIC2A0A1B0GVS7 189 aa22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 IGF1P05019 195 aa22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 LYZP61626 148 aa22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 C19orf54Q5BKX5 351 aa22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 PAXXQ9BUH6 204 aa22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 PARLQ9H300 379 aa22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 OR51M1Q9H341 326 aa22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 S4R3C0 116 aa22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 F8W735 103 aaPredicted RBP22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 NECAP1Q8NC96 275 aa22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 WFDC11Q8NEX6 87 aa22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 RPUSD4Q96CM3 377 aaKnown RBP22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 NAT8Q9UHE5 227 aa22.79■■□□□ 1.24
CTDNEP1-208ENST00000573600 CSMD2Q7Z408 3487 aa22.78■■□□□ 1.24
CTDNEP1-208ENST00000573600 RHOGP84095 191 aa22.78■■□□□ 1.24
CTDNEP1-208ENST00000573600 KIAA0141Q14154 515 aaPredicted RBP22.78■■□□□ 1.24
CTDNEP1-208ENST00000573600 TMEM88Q6PEY1 159 aa22.78■■□□□ 1.24
CTDNEP1-208ENST00000573600 OR5R1Q8NH85 324 aa22.78■■□□□ 1.24
CTDNEP1-208ENST00000573600 SDF2L1Q9HCN8 221 aa22.78■■□□□ 1.24
CTDNEP1-208ENST00000573600 APCP25054 2843 aa22.77■■□□□ 1.24
CTDNEP1-208ENST00000573600 A0A1W2PRE2 83 aa22.77■■□□□ 1.24
CTDNEP1-208ENST00000573600 NUPL2O15504 423 aaKnown RBP22.77■■□□□ 1.24
CTDNEP1-208ENST00000573600 OR10J4P0C629 311 aa22.77■■□□□ 1.24
CTDNEP1-208ENST00000573600 UBE2L3P68036 154 aaKnown RBP22.77■■□□□ 1.24
CTDNEP1-208ENST00000573600 ZNF674Q2M3X9 581 aa22.77■■□□□ 1.24
CTDNEP1-208ENST00000573600 FOXC2Q99958 501 aa22.77■■□□□ 1.24
CTDNEP1-208ENST00000573600 SMCO4Q9NRQ5 59 aa22.77■■□□□ 1.24
CTDNEP1-208ENST00000573600 MRPL27Q9P0M9 148 aaKnown RBP22.77■■□□□ 1.24
CTDNEP1-208ENST00000573600 B4DEV8 164 aa22.77■■□□□ 1.23
CTDNEP1-208ENST00000573600 IER3P46695 156 aa22.77■■□□□ 1.23
CTDNEP1-208ENST00000573600 C15orf32Q32M92 178 aa22.77■■□□□ 1.23
CTDNEP1-208ENST00000573600 CBLN2Q8IUK8 224 aa22.77■■□□□ 1.23
CTDNEP1-208ENST00000573600 Q8WTZ3 238 aa22.77■■□□□ 1.23
CTDNEP1-208ENST00000573600 GAR1Q9NY12 217 aaKnown RBP22.77■■□□□ 1.23
CTDNEP1-208ENST00000573600 TMEM241Q24JQ0 296 aa22.76■■□□□ 1.23
CTDNEP1-208ENST00000573600 S100A7AQ86SG5 101 aa22.75■■□□□ 1.23
CTDNEP1-208ENST00000573600 TEX29Q8N6K0 151 aa22.75■■□□□ 1.23
CTDNEP1-208ENST00000573600 ZNF491Q8N8L2 437 aa22.75■■□□□ 1.23
CTDNEP1-208ENST00000573600 ZNF502Q8TBZ5 544 aa22.75■■□□□ 1.23
CTDNEP1-208ENST00000573600 RNF125Q96EQ8 232 aa22.75■■□□□ 1.23
CTDNEP1-208ENST00000573600 WI2-2373I1.2A0A1W2PRP0 233 aa22.74■■□□□ 1.23
CTDNEP1-208ENST00000573600 IGHV4-59P01825 116 aa22.74■■□□□ 1.23
CTDNEP1-208ENST00000573600 NPPCP23582 126 aa22.74■■□□□ 1.23
CTDNEP1-208ENST00000573600 OR2C1O95371 312 aa22.74■■□□□ 1.23
CTDNEP1-208ENST00000573600 SLC25A39Q9BZJ4 359 aaPredicted RBP22.74■■□□□ 1.23
CTDNEP1-208ENST00000573600 A0A087WWC5 75 aa22.73■■□□□ 1.23
CTDNEP1-208ENST00000573600 IGHV3-23P01764 117 aa22.73■■□□□ 1.23
CTDNEP1-208ENST00000573600 PYYP10082 97 aa22.73■■□□□ 1.23
CTDNEP1-208ENST00000573600 EEF1AKMT3Q96AZ1 226 aa22.73■■□□□ 1.23
CTDNEP1-208ENST00000573600 FXYD5Q96DB9 178 aa22.73■■□□□ 1.23
CTDNEP1-208ENST00000573600 SVEP1Q4LDE5 3571 aa22.73■■□□□ 1.23
CTDNEP1-208ENST00000573600 OR2T8A6NH00 312 aa22.72■■□□□ 1.23
CTDNEP1-208ENST00000573600 NDUFB4O95168 129 aa22.72■■□□□ 1.23
CTDNEP1-208ENST00000573600 BRI3O95415 125 aa22.72■■□□□ 1.23
CTDNEP1-208ENST00000573600 IL4P05112 153 aa22.72■■□□□ 1.23
CTDNEP1-208ENST00000573600 AKR1C3P42330 323 aa22.72■■□□□ 1.23
CTDNEP1-208ENST00000573600 BLCAPP62952 87 aa22.72■■□□□ 1.23
CTDNEP1-208ENST00000573600 Q6YL49 198 aa22.72■■□□□ 1.23
CTDNEP1-208ENST00000573600 C11orf52Q96A22 123 aa22.72■■□□□ 1.23
CTDNEP1-208ENST00000573600 TUBA4BQ9H853 241 aa22.72■■□□□ 1.23
CTDNEP1-208ENST00000573600 HELZ2Q9BYK8 2649 aaKnown RBP22.72■■□□□ 1.23
CTDNEP1-208ENST00000573600 FAM223BA6NKX1 122 aa22.71■■□□□ 1.23
CTDNEP1-208ENST00000573600 H3BUA1 57 aa22.71■■□□□ 1.23
CTDNEP1-208ENST00000573600 AP4M1O00189 453 aa22.71■■□□□ 1.23
CTDNEP1-208ENST00000573600 CTSGP08311 255 aa22.71■■□□□ 1.23
CTDNEP1-208ENST00000573600 FAM223AQ8IWN6 122 aa22.71■■□□□ 1.23
CTDNEP1-208ENST00000573600 ATP6V0BQ99437 205 aa22.71■■□□□ 1.23
CTDNEP1-208ENST00000573600 TRBV7-1A0A0A6YYK4 115 aa22.71■■□□□ 1.23
CTDNEP1-208ENST00000573600 MS4A10Q96PG2 267 aa22.71■■□□□ 1.23
CTDNEP1-208ENST00000573600 ZNF580Q9UK33 172 aa22.71■■□□□ 1.23
CTDNEP1-208ENST00000573600 GCN1Q92616 2671 aaKnown RBP22.71■■□□□ 1.23
CTDNEP1-208ENST00000573600 SCO2A0A1W2PP80 73 aa22.7■■□□□ 1.22
CTDNEP1-208ENST00000573600 CIARTQ8N365 385 aaPredicted RBP22.7■■□□□ 1.22
CTDNEP1-208ENST00000573600 SHANK2-AS3Q9BTD1 123 aa22.7■■□□□ 1.22
CTDNEP1-208ENST00000573600 PRDM13Q9H4Q3 707 aa22.7■■□□□ 1.22
CTDNEP1-208ENST00000573600 TMEM14CQ9P0S9 112 aa22.7■■□□□ 1.22
CTDNEP1-208ENST00000573600 LINC00527Q9UJ94 153 aa22.7■■□□□ 1.22
CTDNEP1-208ENST00000573600 TSPAN4O14817 238 aa22.69■■□□□ 1.22
CTDNEP1-208ENST00000573600 ATP5G2Q06055 141 aa22.69■■□□□ 1.22
CTDNEP1-208ENST00000573600 TMA7Q9Y2S6 64 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms