RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 PET117Q6UWS5 81 aa8.63□□□□□ -1.03
USB1-212ENST00000566082 GFRALQ6UXV0 394 aa8.63□□□□□ -1.03
USB1-212ENST00000566082 LTBP2Q14767 1821 aa8.63□□□□□ -1.03
USB1-212ENST00000566082 MED13Q9UHV7 2174 aa8.63□□□□□ -1.03
USB1-212ENST00000566082 IGHV1-69-2A0A0G2JMI3 117 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 C7orf71A4D174 169 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 ZNF207O43670 478 aaKnown RBP8.62□□□□□ -1.03
USB1-212ENST00000566082 FAM27E3Q08E93 113 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 MBNL2Q5VZF2 373 aaKnown RBP8.62□□□□□ -1.03
USB1-212ENST00000566082 TIMD4Q96H15 378 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 ST20Q9HBF5 79 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 IGLV2-14P01704 120 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 IL4P05112 153 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 PSG1P11464 419 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 TDGF1P13385 188 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 IGLL1P15814 213 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 KIR2DL2P43627 348 aaPredicted RBP8.62□□□□□ -1.03
USB1-212ENST00000566082 RIPPLY3P57055 190 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 GAGE1Q13065 139 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 KIR3DL3Q8N743 410 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 ZNF414Q96IQ9 312 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 MRPL27Q9P0M9 148 aaKnown RBP8.62□□□□□ -1.03
USB1-212ENST00000566082 C16orf97H3BN30 126 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 TMEM186Q96B77 213 aa8.62□□□□□ -1.03
USB1-212ENST00000566082 MUC22E2RYF6 1773 aaPredicted RBP8.61□□□□□ -1.03
USB1-212ENST00000566082 RNFT1Q5M7Z0 435 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 FAM90A1Q86YD7 464 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 FBXL15Q9H469 300 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 RELQ04864 619 aaPredicted RBP8.61□□□□□ -1.03
USB1-212ENST00000566082 C2orf83Q53S99 150 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 C1orf162Q8NEQ5 155 aaPredicted RBP8.61□□□□□ -1.03
USB1-212ENST00000566082 PRELID3AQ96N28 172 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 ZNF257Q9Y2Q1 563 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 TTC28Q96AY4 2481 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 SYS1-DBNDD2H3BUS1 97 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 ZNF134P52741 427 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 Q6ZR03 302 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 CIARTQ8N365 385 aaPredicted RBP8.61□□□□□ -1.03
USB1-212ENST00000566082 FMC1Q96HJ9 113 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 MEGF9Q9H1U4 602 aa8.61□□□□□ -1.03
USB1-212ENST00000566082 RPUSD1Q9UJJ7 312 aaKnown RBP8.61□□□□□ -1.03
USB1-212ENST00000566082 PMS2P5A8MQ11 134 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 TIMM23BQ5SRD1 257 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 FAM168AQ92567 244 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 TMUB1Q9BVT8 246 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 MRPS16Q9Y3D3 137 aaKnown RBP8.6□□□□□ -1.03
USB1-212ENST00000566082 ARFGEF3Q5TH69 2177 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 IGHV3OR16-8A0A075B7F1 116 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 CGB1A6NKQ9 187 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 LGALS7P47929 136 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 FXYD7P58549 80 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 KRTAP27-1Q3LI81 207 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 SCGB1D4Q6XE38 83 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 SPACA3Q8IXA5 215 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 EXOC3-AS1Q8N2X6 119 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 ASCL2Q99929 193 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 ZNF71Q9NQZ8 489 aaPredicted RBP8.6□□□□□ -1.03
USB1-212ENST00000566082 SOX21Q9Y651 276 aaPredicted RBP8.6□□□□□ -1.03
USB1-212ENST00000566082 OR2T8A6NH00 312 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 RNASE2P10153 161 aaKnown RBP8.6□□□□□ -1.03
USB1-212ENST00000566082 C11orf52Q96A22 123 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 SMIM12Q96EX1 92 aa8.6□□□□□ -1.03
USB1-212ENST00000566082 TM4SF5O14894 197 aa8.59□□□□□ -1.03
USB1-212ENST00000566082 CACNG7P62955 275 aa8.59□□□□□ -1.03
USB1-212ENST00000566082 VWC2Q2TAL6 325 aa8.59□□□□□ -1.03
USB1-212ENST00000566082 ATP5L2Q7Z4Y8 100 aa8.59□□□□□ -1.03
USB1-212ENST00000566082 SPCS1Q9Y6A9 102 aa8.59□□□□□ -1.03
USB1-212ENST00000566082 NUP210LQ5VU65 1888 aa8.59□□□□□ -1.03
USB1-212ENST00000566082 WNT2P09544 360 aa8.59□□□□□ -1.03
USB1-212ENST00000566082 HIST1H1AQ02539 215 aaPredicted RBP8.59□□□□□ -1.03
USB1-212ENST00000566082 MYOZ3Q8TDC0 251 aa8.59□□□□□ -1.03
USB1-212ENST00000566082 LINC00312Q9Y6C7 94 aa8.59□□□□□ -1.03
USB1-212ENST00000566082 SCGB1C2P0DMR2 95 aa8.59□□□□□ -1.03
USB1-212ENST00000566082 CHCHD1Q96BP2 118 aaKnown RBP8.59□□□□□ -1.03
USB1-212ENST00000566082 TMEM14BQ9NUH8 114 aa8.59□□□□□ -1.03
USB1-212ENST00000566082 TRAV30A0A087WSZ9 112 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 TRAV8-6A0A0B4J262 113 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 CD40P25942 277 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 C1orf185Q5T7R7 199 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 DUX4L9Q6RFH8 374 aaPredicted RBP8.58□□□□□ -1.04
USB1-212ENST00000566082 ASCL5Q7RTU5 278 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 TEX45Q8NA69 505 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 C5orf30Q96GV9 206 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 KLK15Q9H2R5 256 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 IGKV3-7A0A075B6H7 116 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 C15orf65H3BRN8 121 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 RASL11AQ6T310 242 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 OR4A5Q8NH83 315 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 MAP1LC3AQ9H492 121 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 COL6A6A6NMZ7 2263 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 CCL25O15444 150 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 CEACAM3P40198 252 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 TMEM30BQ3MIR4 351 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 SPANXN1Q5VSR9 72 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 NEUROG1Q92886 237 aa8.58□□□□□ -1.04
USB1-212ENST00000566082 IGHV3OR16-13A0A075B7E8 117 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 IGHV3-74A0A0B4J1X5 117 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 GAGE12BA1L429 117 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 SRSF9Q13242 221 aaKnown RBP eCLIP8.57□□□□□ -1.04
USB1-212ENST00000566082 ZNF329Q86UD4 541 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms