RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 PSG1P11464 419 aa12.1□□□□□ -0.47
CCNF-203ENST00000564236 NUP62P37198 522 aaPredicted RBP12.1□□□□□ -0.47
CCNF-203ENST00000564236 SNRPD3P62318 126 aaKnown RBP12.1□□□□□ -0.47
CCNF-203ENST00000564236 PSMG4Q5JS54 123 aa12.1□□□□□ -0.47
CCNF-203ENST00000564236 OR8G2PQ6IF36 304 aa12.1□□□□□ -0.47
CCNF-203ENST00000564236 SIGLEC15Q6ZMC9 328 aa12.1□□□□□ -0.47
CCNF-203ENST00000564236 DTD1Q8TEA8 209 aa12.1□□□□□ -0.47
CCNF-203ENST00000564236 DUXBA0A1W2PPF3 345 aa12.09□□□□□ -0.47
CCNF-203ENST00000564236 PITX3O75364 302 aa12.09□□□□□ -0.47
CCNF-203ENST00000564236 IFNA10P01566 189 aa12.09□□□□□ -0.47
CCNF-203ENST00000564236 GPX4P36969 197 aaPredicted RBP12.09□□□□□ -0.47
CCNF-203ENST00000564236 LYZL2Q7Z4W2 148 aa12.09□□□□□ -0.47
CCNF-203ENST00000564236 LGI3Q8N145 548 aa12.09□□□□□ -0.47
CCNF-203ENST00000564236 OR51G1Q8NGK1 321 aa12.09□□□□□ -0.47
CCNF-203ENST00000564236 ACY3Q96HD9 319 aa12.09□□□□□ -0.47
CCNF-203ENST00000564236 TBC1D24Q9ULP9 559 aa12.09□□□□□ -0.47
CCNF-203ENST00000564236 ELOA3CA0A087WX78 387 aaPredicted RBP12.08□□□□□ -0.48
CCNF-203ENST00000564236 H3BMM0 161 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 SLC25A6P12236 298 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 ANXA3P12429 323 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 TNFSF8P32971 234 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 NKX2-1P43699 371 aaPredicted RBP12.08□□□□□ -0.48
CCNF-203ENST00000564236 NUTF2P61970 127 aaKnown RBP12.08□□□□□ -0.48
CCNF-203ENST00000564236 PRR20EP86478 221 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 PRR20CP86479 221 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 PRR20DP86480 221 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 PRR20BP86481 221 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 PRR20AP86496 221 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 KLF9Q13886 244 aaPredicted RBP12.08□□□□□ -0.48
CCNF-203ENST00000564236 RNF125Q96EQ8 232 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 CLUHP3Q96NS8 147 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 C1QTNF4Q9BXJ3 329 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 RBKSQ9H477 322 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 PRR13Q9NZ81 148 aa12.08□□□□□ -0.48
CCNF-203ENST00000564236 IGKV1D-37A0A075B6S9 117 aa12.07□□□□□ -0.48
CCNF-203ENST00000564236 H3BMQ9 156 aa12.07□□□□□ -0.48
CCNF-203ENST00000564236 HLA-DRB4P13762 266 aa12.07□□□□□ -0.48
CCNF-203ENST00000564236 HLA-DMBP28068 263 aa12.07□□□□□ -0.48
CCNF-203ENST00000564236 GAMTQ14353 236 aa12.07□□□□□ -0.48
CCNF-203ENST00000564236 C1orf194Q5T5A4 169 aa12.07□□□□□ -0.48
CCNF-203ENST00000564236 LRTM2Q8N967 370 aa12.07□□□□□ -0.48
CCNF-203ENST00000564236 DEDD2Q8WXF8 326 aa12.07□□□□□ -0.48
CCNF-203ENST00000564236 TRIM63Q969Q1 353 aa12.07□□□□□ -0.48
CCNF-203ENST00000564236 PFDN2Q9UHV9 154 aa12.07□□□□□ -0.48
CCNF-203ENST00000564236 HLA-DRB4X5D2U9 266 aa12.07□□□□□ -0.48
CCNF-203ENST00000564236 TRAV10A0A0B4J240 114 aa12.06□□□□□ -0.48
CCNF-203ENST00000564236 FABP12A6NFH5 140 aa12.06□□□□□ -0.48
CCNF-203ENST00000564236 AKR1C4P17516 323 aa12.06□□□□□ -0.48
CCNF-203ENST00000564236 TMEM128Q5BJH2 165 aa12.06□□□□□ -0.48
CCNF-203ENST00000564236 Q6ZTC4 211 aa12.06□□□□□ -0.48
CCNF-203ENST00000564236 NEU1Q99519 415 aa12.06□□□□□ -0.48
CCNF-203ENST00000564236 MCUBQ9NWR8 336 aa12.06□□□□□ -0.48
CCNF-203ENST00000564236 IGLL5B9A064 214 aa12.05□□□□□ -0.48
CCNF-203ENST00000564236 SOCS3O14543 225 aa12.05□□□□□ -0.48
CCNF-203ENST00000564236 FAUP35544 74 aaKnown RBP12.05□□□□□ -0.48
CCNF-203ENST00000564236 ZNF705AQ6ZN79 300 aaPredicted RBP12.05□□□□□ -0.48
CCNF-203ENST00000564236 RNF126Q9BV68 326 aa12.05□□□□□ -0.48
CCNF-203ENST00000564236 CLEC5AQ9NY25 188 aa12.05□□□□□ -0.48
CCNF-203ENST00000564236 AMBPP02760 352 aa12.04□□□□□ -0.48
CCNF-203ENST00000564236 ZNF90Q03938 601 aa12.04□□□□□ -0.48
CCNF-203ENST00000564236 TRGV9Q99603 122 aa12.04□□□□□ -0.48
CCNF-203ENST00000564236 AGRNO00468 2067 aa12.04□□□□□ -0.48
CCNF-203ENST00000564236 ZFP92A6NM28 416 aa12.03□□□□□ -0.48
CCNF-203ENST00000564236 ZNF705FA8MVS1 300 aaPredicted RBP12.03□□□□□ -0.48
CCNF-203ENST00000564236 FABP1P07148 127 aa12.03□□□□□ -0.48
CCNF-203ENST00000564236 ZNF705DP0CH99 300 aaPredicted RBP12.03□□□□□ -0.48
CCNF-203ENST00000564236 ZNF705BP0CI00 300 aaPredicted RBP12.03□□□□□ -0.48
CCNF-203ENST00000564236 PSMB3P49720 205 aa12.03□□□□□ -0.48
CCNF-203ENST00000564236 AP3S2P59780 193 aa12.03□□□□□ -0.48
CCNF-203ENST00000564236 C12orf74Q32Q52 190 aa12.03□□□□□ -0.48
CCNF-203ENST00000564236 THAP8Q8NA92 274 aa12.03□□□□□ -0.48
CCNF-203ENST00000564236 OR1S1Q8NH92 325 aa12.03□□□□□ -0.48
CCNF-203ENST00000564236 MCFD2Q8NI22 146 aa12.03□□□□□ -0.48
CCNF-203ENST00000564236 SLC35E1Q96K37 410 aa12.03□□□□□ -0.48
CCNF-203ENST00000564236 SLC25A21Q9BQT8 299 aaPredicted RBP12.03□□□□□ -0.48
CCNF-203ENST00000564236 SAV1Q9H4B6 383 aaPredicted RBP12.03□□□□□ -0.48
CCNF-203ENST00000564236 CELA1Q9UNI1 258 aa12.03□□□□□ -0.48
CCNF-203ENST00000564236 V9GYH0 126 aa12.03□□□□□ -0.48
CCNF-203ENST00000564236 IGHV4-4A0A075B6R2 117 aa12.02□□□□□ -0.49
CCNF-203ENST00000564236 IGKV1OR2-108A0A075B7D4 117 aa12.02□□□□□ -0.49
CCNF-203ENST00000564236 SMIM9A6NGZ8 99 aa12.02□□□□□ -0.49
CCNF-203ENST00000564236 SNRPGP15A8MWD9 76 aa12.02□□□□□ -0.49
CCNF-203ENST00000564236 PRSS46E5RG02 174 aa12.02□□□□□ -0.49
CCNF-203ENST00000564236 SAMD13Q5VXD3 122 aa12.02□□□□□ -0.49
CCNF-203ENST00000564236 SPATA31B1PQ5VZV4 182 aa12.02□□□□□ -0.49
CCNF-203ENST00000564236 FOXI2Q6ZQN5 318 aa12.02□□□□□ -0.49
CCNF-203ENST00000564236 WDR12Q9GZL7 423 aaKnown RBP12.02□□□□□ -0.49
CCNF-203ENST00000564236 XCL2Q9UBD3 114 aa12.02□□□□□ -0.49
CCNF-203ENST00000564236 SLC45A2Q9UMX9 530 aa12.02□□□□□ -0.49
CCNF-203ENST00000564236 TMED3Q9Y3Q3 217 aa12.02□□□□□ -0.49
CCNF-203ENST00000564236 NOL3O60936 208 aaKnown RBP12.01□□□□□ -0.49
CCNF-203ENST00000564236 CFDP00746 253 aaPredicted RBP12.01□□□□□ -0.49
CCNF-203ENST00000564236 PAX9P55771 341 aa12.01□□□□□ -0.49
CCNF-203ENST00000564236 RAB11AP62491 216 aa12.01□□□□□ -0.49
CCNF-203ENST00000564236 ZNF79Q15937 498 aa12.01□□□□□ -0.49
CCNF-203ENST00000564236 GDF5OSQ5U4N7 250 aa12.01□□□□□ -0.49
CCNF-203ENST00000564236 CENPSQ8N2Z9 138 aa12.01□□□□□ -0.49
CCNF-203ENST00000564236 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
CCNF-203ENST00000564236 CIB3Q96Q77 187 aaPredicted RBP12.01□□□□□ -0.49
CCNF-203ENST00000564236 PBDC1Q9BVG4 233 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms