RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 SLC25A4P12235 298 aa13.24□□□□□ -0.29
E4F1-203ENST00000563643 IFITM3Q01628 133 aa13.24□□□□□ -0.29
E4F1-203ENST00000563643 MLANAQ16655 118 aa13.24□□□□□ -0.29
E4F1-203ENST00000563643 MRPL36Q9P0J6 103 aaKnown RBP13.24□□□□□ -0.29
E4F1-203ENST00000563643 MRPL27Q9P0M9 148 aaKnown RBP13.24□□□□□ -0.29
E4F1-203ENST00000563643 C15orf62A8K5M9 175 aa13.23□□□□□ -0.29
E4F1-203ENST00000563643 MPTX1A8MV57 137 aa13.23□□□□□ -0.29
E4F1-203ENST00000563643 CLN5O75503 358 aa13.23□□□□□ -0.29
E4F1-203ENST00000563643 TMEM50AO95807 157 aa13.23□□□□□ -0.29
E4F1-203ENST00000563643 H2AFB2P0C5Z0 115 aa13.23□□□□□ -0.29
E4F1-203ENST00000563643 ETFRF1Q6IPR1 90 aa13.23□□□□□ -0.29
E4F1-203ENST00000563643 CIB3Q96Q77 187 aaPredicted RBP13.23□□□□□ -0.29
E4F1-203ENST00000563643 C20orf24Q9BUV8 137 aa13.23□□□□□ -0.29
E4F1-203ENST00000563643 C16orf90A8MZG2 172 aa13.22□□□□□ -0.29
E4F1-203ENST00000563643 C11orf94C9JXX5 98 aa13.22□□□□□ -0.29
E4F1-203ENST00000563643 SYNGR2O43760 224 aa13.22□□□□□ -0.29
E4F1-203ENST00000563643 SCGB2A1O75556 95 aa13.22□□□□□ -0.29
E4F1-203ENST00000563643 TMEM116Q8NCL8 245 aa13.22□□□□□ -0.29
E4F1-203ENST00000563643 ENKURQ8TC29 256 aa13.22□□□□□ -0.29
E4F1-203ENST00000563643 ZNF431Q8TF32 576 aaPredicted RBP13.22□□□□□ -0.29
E4F1-203ENST00000563643 OR10C1Q96KK4 312 aa13.22□□□□□ -0.29
E4F1-203ENST00000563643 RARRES2Q99969 163 aa13.22□□□□□ -0.29
E4F1-203ENST00000563643 TRAV30A0A087WSZ9 112 aa13.21□□□□□ -0.29
E4F1-203ENST00000563643 IAPPP10997 89 aa13.21□□□□□ -0.29
E4F1-203ENST00000563643 RPL35AP18077 110 aaKnown RBP13.21□□□□□ -0.29
E4F1-203ENST00000563643 ID3Q02535 119 aa13.21□□□□□ -0.29
E4F1-203ENST00000563643 LGALS9BQ3B8N2 356 aa13.21□□□□□ -0.29
E4F1-203ENST00000563643 PRSS54Q6PEW0 395 aa13.21□□□□□ -0.29
E4F1-203ENST00000563643 BTNL8Q6UX41 500 aa13.21□□□□□ -0.29
E4F1-203ENST00000563643 ZNF600Q6ZNG1 722 aa13.21□□□□□ -0.29
E4F1-203ENST00000563643 POM121L12Q8N7R1 296 aa13.21□□□□□ -0.29
E4F1-203ENST00000563643 OR4D5Q8NGN0 318 aa13.21□□□□□ -0.29
E4F1-203ENST00000563643 MAGT1Q9H0U3 335 aa13.21□□□□□ -0.29
E4F1-203ENST00000563643 UBQLN2Q9UHD9 624 aa13.21□□□□□ -0.29
E4F1-203ENST00000563643 IGHV4-4A0A075B6R2 117 aa13.2□□□□□ -0.3
E4F1-203ENST00000563643 IGHV3OR16-8A0A075B7F1 116 aa13.2□□□□□ -0.3
E4F1-203ENST00000563643 YIF1AO95070 293 aa13.2□□□□□ -0.3
E4F1-203ENST00000563643 RND2P52198 227 aa13.2□□□□□ -0.3
E4F1-203ENST00000563643 RBMY1FQ15415 496 aaKnown RBP13.2□□□□□ -0.3
E4F1-203ENST00000563643 TOMM20LQ6UXN7 152 aa13.2□□□□□ -0.3
E4F1-203ENST00000563643 SEC22CQ9BRL7 303 aa13.2□□□□□ -0.3
E4F1-203ENST00000563643 MAP6D1Q9H9H5 199 aa13.2□□□□□ -0.3
E4F1-203ENST00000563643 TRAV25A0A0B4J276 109 aa13.19□□□□□ -0.3
E4F1-203ENST00000563643 ZNF207O43670 478 aaKnown RBP13.19□□□□□ -0.3
E4F1-203ENST00000563643 IGKV1-17P01599 117 aa13.19□□□□□ -0.3
E4F1-203ENST00000563643 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
E4F1-203ENST00000563643 NKX2-1P43699 371 aaPredicted RBP13.19□□□□□ -0.3
E4F1-203ENST00000563643 DEFA1P59665 94 aa13.19□□□□□ -0.3
E4F1-203ENST00000563643 DEFA3P59666 94 aa13.19□□□□□ -0.3
E4F1-203ENST00000563643 RPP30P78346 268 aaKnown RBP13.19□□□□□ -0.3
E4F1-203ENST00000563643 IAH1Q2TAA2 248 aaPredicted RBP13.19□□□□□ -0.3
E4F1-203ENST00000563643 GINS3Q9BRX5 216 aa13.19□□□□□ -0.3
E4F1-203ENST00000563643 PUS1Q9Y606 427 aaKnown RBP eCLIP13.19□□□□□ -0.3
E4F1-203ENST00000563643 MYCBP2O75592 4640 aa13.18□□□□□ -0.3
E4F1-203ENST00000563643 IGHV7-4-1A0A0J9YVY3 117 aa13.18□□□□□ -0.3
E4F1-203ENST00000563643 WRBO00258 174 aa13.18□□□□□ -0.3
E4F1-203ENST00000563643 DEFB4AO15263 64 aa13.18□□□□□ -0.3
E4F1-203ENST00000563643 IL5P05113 134 aa13.18□□□□□ -0.3
E4F1-203ENST00000563643 GPX4P36969 197 aaPredicted RBP13.18□□□□□ -0.3
E4F1-203ENST00000563643 RAB11AP62491 216 aa13.18□□□□□ -0.3
E4F1-203ENST00000563643 RBPMS2Q6ZRY4 209 aaKnown RBP13.18□□□□□ -0.3
E4F1-203ENST00000563643 NRARPQ7Z6K4 114 aa13.18□□□□□ -0.3
E4F1-203ENST00000563643 C12orf45Q8N5I9 185 aaPredicted RBP13.18□□□□□ -0.3
E4F1-203ENST00000563643 OR1S2Q8NGQ3 325 aa13.18□□□□□ -0.3
E4F1-203ENST00000563643 NPIPB3Q92617 1050 aa13.18□□□□□ -0.3
E4F1-203ENST00000563643 ZFAND3Q9H8U3 227 aa13.18□□□□□ -0.3
E4F1-203ENST00000563643 SMPXQ9UHP9 88 aa13.18□□□□□ -0.3
E4F1-203ENST00000563643 OR10J1P30954 320 aa13.17□□□□□ -0.3
E4F1-203ENST00000563643 POLR2GP62487 172 aaKnown RBP eCLIP13.17□□□□□ -0.3
E4F1-203ENST00000563643 TIGITQ495A1 244 aa13.17□□□□□ -0.3
E4F1-203ENST00000563643 ZBTB8BQ8NAP8 495 aaPredicted RBP13.17□□□□□ -0.3
E4F1-203ENST00000563643 OR11H2Q8NH07 326 aa13.17□□□□□ -0.3
E4F1-203ENST00000563643 ACY3Q96HD9 319 aa13.17□□□□□ -0.3
E4F1-203ENST00000563643 TRAV14DV4A0A0A6YYC5 116 aa13.16□□□□□ -0.3
E4F1-203ENST00000563643 CHEK1O14757 476 aa13.16□□□□□ -0.3
E4F1-203ENST00000563643 P0DMU3 169 aa13.16□□□□□ -0.3
E4F1-203ENST00000563643 FAM231AP0DMU4 169 aa13.16□□□□□ -0.3
E4F1-203ENST00000563643 FAM231CP0DMU5 169 aa13.16□□□□□ -0.3
E4F1-203ENST00000563643 YPEL3P61236 119 aaPredicted RBP13.16□□□□□ -0.3
E4F1-203ENST00000563643 ODF3L2Q3SX64 289 aa13.16□□□□□ -0.3
E4F1-203ENST00000563643 SOHLH1Q5JUK2 328 aa13.16□□□□□ -0.3
E4F1-203ENST00000563643 RHPN1-AS1Q9BWJ2 59 aa13.16□□□□□ -0.3
E4F1-203ENST00000563643 CCSO14618 274 aa13.15□□□□□ -0.3
E4F1-203ENST00000563643 TSPAN4O14817 238 aa13.15□□□□□ -0.3
E4F1-203ENST00000563643 SSSCA1O60232 199 aa13.15□□□□□ -0.3
E4F1-203ENST00000563643 GAMTQ14353 236 aa13.15□□□□□ -0.3
E4F1-203ENST00000563643 SPANXN5Q5MJ07 72 aa13.15□□□□□ -0.3
E4F1-203ENST00000563643 LAMTOR1Q6IAA8 161 aa13.15□□□□□ -0.3
E4F1-203ENST00000563643 SLC35E1Q96K37 410 aa13.15□□□□□ -0.3
E4F1-203ENST00000563643 SPAG8Q99932 426 aaPredicted RBP13.15□□□□□ -0.3
E4F1-203ENST00000563643 GSKIPQ9P0R6 139 aa13.15□□□□□ -0.3
E4F1-203ENST00000563643 PAIP2BQ9ULR5 123 aaKnown RBP13.15□□□□□ -0.3
E4F1-203ENST00000563643 STRAPQ9Y3F4 350 aaKnown RBP13.15□□□□□ -0.3
E4F1-203ENST00000563643 PRSS46E5RG02 174 aa13.14□□□□□ -0.31
E4F1-203ENST00000563643 H3BP45 60 aa13.14□□□□□ -0.31
E4F1-203ENST00000563643 SMIM8Q96KF7 97 aa13.14□□□□□ -0.31
E4F1-203ENST00000563643 RAB40CQ96S21 281 aa13.14□□□□□ -0.31
E4F1-203ENST00000563643 MARVELD1Q9BSK0 173 aa13.14□□□□□ -0.31
E4F1-203ENST00000563643 HRH4Q9H3N8 390 aa13.14□□□□□ -0.31
E4F1-203ENST00000563643 GPN1Q9HCN4 374 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms