RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LOXL3P58215 753 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 TNFAIP6P98066 277 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 FAM201AQ5SY85 155 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 Q8NA96 180 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 GCM1Q9NP62 436 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 RNF7Q9UBF6 113 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 TP73-AS1Q9UF72 201 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 RP1L1Q8IWN7 2480 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 A0A087X0K7 114 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 CGB3P0DN86 165 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 CGB7P0DN87 165 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 HIST1H1EP10412 219 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 C2orf91Q6ZV80 131 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 NUP37Q8NFH4 326 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 PLPPR2Q96GM1 343 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 CALYQ9NYX4 217 aa11.32□□□□□ -0.6
RABGGTA-220ENST00000560998 ERVK-16P61578 105 aa11.31□□□□□ -0.6
RABGGTA-220ENST00000560998 LINC01545Q5VT33 79 aa11.31□□□□□ -0.6
RABGGTA-220ENST00000560998 OR1N2Q8NGR9 330 aa11.31□□□□□ -0.6
RABGGTA-220ENST00000560998 JKAMPQ9P055 326 aa11.31□□□□□ -0.6
RABGGTA-220ENST00000560998 DSCAML1Q8TD84 2053 aa11.31□□□□□ -0.6
RABGGTA-220ENST00000560998 PLCE1Q9P212 2302 aa11.31□□□□□ -0.6
RABGGTA-220ENST00000560998 C16orf97H3BN30 126 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 HBBP68871 147 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 WFDC8Q8IUA0 241 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 OR2K2Q8NGT1 345 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 RAI1Q7Z5J4 1906 aaPredicted RBP11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 ZGRF1Q86YA3 2104 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 CA1P00915 261 aaPredicted RBP11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 ZNF134P52741 427 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 C17orf58Q2M2W7 97 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 TMEM108Q6UXF1 575 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 Q8TCH9 128 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 NABP2Q9BQ15 211 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 MRPL32Q9BYC8 188 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 IFI27L2Q9H2X8 130 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 IDI2-AS1Q9NZ38 188 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 LAMA5O15230 3695 aa11.3□□□□□ -0.6
RABGGTA-220ENST00000560998 TANC2Q9HCD6 1990 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 PSMB11A5LHX3 300 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 FCGR3BO75015 233 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 PPIAL4GP0DN37 164 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 FOXC1Q12948 553 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 RPL39P5Q59GN2 51 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 DUX4L9Q6RFH8 374 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 GFRALQ6UXV0 394 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 ZNF841Q6ZN19 808 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 SNRNP40Q96DI7 357 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 ZNF503Q96F45 646 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 GAFA1Q96PS6 74 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 SSBP3Q9BWW4 388 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 NPFFR1Q9GZQ6 430 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 FNDC4Q9H6D8 234 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 ZNF355PQ9NSJ1 428 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 TCF19Q9Y242 345 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 APC2O95996 2303 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 ICE1Q9Y2F5 2266 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 HCFC1P51610 2035 aa11.29□□□□□ -0.6
RABGGTA-220ENST00000560998 PPIAL4DF5H284 164 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 IGHV3-7P01780 117 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 APOA2P02652 100 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 KIR2DS2P43631 304 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 UTF1Q5T230 341 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 VSTM2AQ8TAG5 236 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 FAM168AQ92567 244 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 RAB9BQ9NP90 201 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 ACACAQ13085 2346 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 DYSFO75923 2080 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 NBEAQ8NFP9 2946 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 A0A0G2JLM5 398 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 HIGD1CA8MV81 97 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 IGFBP2P18065 325 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 PLP1P60201 277 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 HSD52Q0P140 79 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 CT83Q5H943 113 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 JMJD8Q96S16 334 aa11.28□□□□□ -0.6
RABGGTA-220ENST00000560998 ACTL6BO94805 426 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 THBDP07204 575 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 C8orf88P0DMB2 117 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 C16orf54Q6UWD8 224 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 SSX8Q7RTT4 187 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 ABHD12Q8N2K0 398 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 DEFB108BQ8NET1 73 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 LEAP2Q969E1 77 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 CCL13Q99616 98 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 SIGMAR1Q99720 223 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 NDFIP1Q9BT67 221 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 SSBP4Q9BWG4 385 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 FAM234AQ9H0X4 552 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 TMEM189A5PLL7 270 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 SIVA1O15304 175 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 CAMPP49913 170 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 ADIPOQQ15848 244 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 CT45A1Q5HYN5 189 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 TEX36Q5VZQ5 186 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 ZNF788Q6ZQV5 615 aa11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 C1orf229Q6ZS94 237 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-220ENST00000560998 OR9G4Q8NGQ1 327 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms