RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 TSPAN4O14817 238 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 MBPP02686 304 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 MFAP4P55083 255 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 CLLU1Q5K131 121 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 RBPMS2Q6ZRY4 209 aaKnown RBP10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 GPR146Q96CH1 333 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 RNF2Q99496 336 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 SPAG8Q99932 426 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 C11orf1Q9H5F2 150 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 FNDC4Q9H6D8 234 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 A0A1B0GU03 582 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 KANTRA0A1W2PQU2 76 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 LINC00862A6NCI5 91 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 K7EPK0 472 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 IFNA17P01571 189 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 SLC25A6P12236 298 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 AP2S1P53680 142 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 ERHP84090 104 aaKnown RBP10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 MLANAQ16655 118 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 AARDQ4LEZ3 155 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 STOML3Q8TAV4 291 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 TXN2Q99757 166 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 SMPXQ9UHP9 88 aa10.41□□□□□ -0.74
TNFAIP2-207ENST00000560562 ALMS1Q8TCU4 4167 aa10.4□□□□□ -0.74
TNFAIP2-207ENST00000560562 IGHV3OR16-13A0A075B7E8 117 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 IGHV3-74A0A0B4J1X5 117 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 IGHV7-4-1A0A0J9YVY3 117 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 CHEK1O14757 476 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 NUPL2O15504 423 aaKnown RBP10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 S100A10P60903 97 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 SMCO1Q147U7 214 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 BSXQ3C1V8 233 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 ST8SIA2Q92186 375 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 ARPC5LQ9BPX5 153 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 GGTLC1Q9BX51 225 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 ZFAND3Q9H8U3 227 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 CYTL1Q9NRR1 136 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 CACNG5Q9UF02 275 aa10.4□□□□□ -0.75
TNFAIP2-207ENST00000560562 E5RGE8 158 aa10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 GNG7O60262 68 aa10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 PITX3O75364 302 aa10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 YIF1AO95070 293 aa10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 APOHP02749 345 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 RLN2P04090 185 aa10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 HOXA1P49639 335 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 RELQ04864 619 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 TOMM20LQ6UXN7 152 aa10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 LILRB2Q8N423 598 aa10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 PHYHIPLQ96FC7 376 aa10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 OVOL2Q9BRP0 275 aa10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP2-207ENST00000560562 LOC102724200A0A096LPH7 203 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP2-207ENST00000560562 S100A1P23297 94 aa10.38□□□□□ -0.75
TNFAIP2-207ENST00000560562 NUP62P37198 522 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP2-207ENST00000560562 SNCAP37840 140 aa10.38□□□□□ -0.75
TNFAIP2-207ENST00000560562 ZNF124Q15973 351 aa10.38□□□□□ -0.75
TNFAIP2-207ENST00000560562 FAM90A2PQ658T7 463 aa10.38□□□□□ -0.75
TNFAIP2-207ENST00000560562 TMEM116Q8NCL8 245 aa10.38□□□□□ -0.75
TNFAIP2-207ENST00000560562 TMEM170AQ8WVE7 144 aa10.38□□□□□ -0.75
TNFAIP2-207ENST00000560562 CACFD1Q9UGQ2 172 aa10.38□□□□□ -0.75
TNFAIP2-207ENST00000560562 RCL1Q9Y2P8 373 aaKnown RBP10.38□□□□□ -0.75
TNFAIP2-207ENST00000560562 LSM5Q9Y4Y9 91 aaKnown RBP10.38□□□□□ -0.75
TNFAIP2-207ENST00000560562 NXPH3O95157 252 aa10.37□□□□□ -0.75
TNFAIP2-207ENST00000560562 TMEM50AO95807 157 aa10.37□□□□□ -0.75
TNFAIP2-207ENST00000560562 P2RY1P47900 373 aa10.37□□□□□ -0.75
TNFAIP2-207ENST00000560562 ID3Q02535 119 aa10.37□□□□□ -0.75
TNFAIP2-207ENST00000560562 PUS1Q9Y606 427 aaKnown RBP eCLIP10.37□□□□□ -0.75
TNFAIP2-207ENST00000560562 IGKV3-7A0A075B6H7 116 aa10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 TAAR5O14804 337 aa10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 SCGB1D2O95969 90 aa10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 NMBP08949 121 aa10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 RPL12P30050 165 aaKnown RBP10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 NKX2-1P43699 371 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 SPCS3P61009 180 aa10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 ALKAL2Q6UX46 152 aa10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 APRG1Q8IVJ8 170 aa10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 OR52E5Q8NH55 327 aa10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 FAM210AQ96ND0 272 aa10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 ZNF471Q9BX82 626 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 MED9Q9NWA0 146 aa10.36□□□□□ -0.75
TNFAIP2-207ENST00000560562 IGHV3-66A0A0C4DH42 116 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 LCE6AA0A183 80 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 OR4C46A6NHA9 309 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 FAM90A26D6RGX4 464 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 IGKV1-17P01599 117 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 OPRK1P41145 380 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 NPBWR1P48145 328 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 TFPI2P48307 235 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 RAB14P61106 215 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 EWSR1Q01844 656 aaKnown RBP eCLIP10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 ZNF600Q6ZNG1 722 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 GBGT1Q8N5D6 347 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 VSIRQ9H7M9 311 aa10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 EPPK1P58107 5090 aaKnown RBP10.35□□□□□ -0.75
TNFAIP2-207ENST00000560562 CLN5O75503 358 aa10.34□□□□□ -0.75
TNFAIP2-207ENST00000560562 TPT1P13693 172 aaKnown RBP10.34□□□□□ -0.75
TNFAIP2-207ENST00000560562 DEFB135Q30KP9 77 aa10.34□□□□□ -0.75
TNFAIP2-207ENST00000560562 FAM24BQ8N5W8 94 aa10.34□□□□□ -0.75
TNFAIP2-207ENST00000560562 OR4X1Q8NH49 305 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms