RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 SERTAD4Q9NUC0 356 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 MAP1LC3B2A6NCE7 125 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 OR2T8A6NH00 312 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 NUPL2O15504 423 aaKnown RBP6.69□□□□□ -1.34
TRAF3-209ENST00000560463 TCF21O43680 179 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 COX7A2P2O60397 106 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 OR2C1O95371 312 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 OR5G3P0C626 314 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 STAG3L2P0CL84 134 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 STAG3L3P0CL85 134 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 PSG1P11464 419 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 GATA2P23769 480 aaPredicted RBP6.69□□□□□ -1.34
TRAF3-209ENST00000560463 S100A7P31151 101 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 ZNF726P1Q15940 193 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 TMEM95Q3KNT9 176 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 FAM78BQ5VT40 261 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 C10orf113Q5VZT2 155 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 FAM122CQ6P4D5 195 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 RNF152Q8N8N0 203 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 SFT2D1Q8WV19 159 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 MARC2Q969Z3 335 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 MAP1LC3BQ9GZQ8 125 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 GSX1Q9H4S2 264 aaPredicted RBP6.69□□□□□ -1.34
TRAF3-209ENST00000560463 RNF24Q9Y225 148 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 FUT9Q9Y231 359 aa6.69□□□□□ -1.34
TRAF3-209ENST00000560463 NIPBLQ6KC79 2804 aaeCLIP6.68□□□□□ -1.34
TRAF3-209ENST00000560463 WNK1Q9H4A3 2382 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.68□□□□□ -1.34
TRAF3-209ENST00000560463 WI2-2373I1.2A0A1W2PRP0 233 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 TGOLN2O43493 480 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 HYPMO75409 117 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 NDUFA7O95182 113 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 CXorf1O96002 111 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 CLEC3BP05452 202 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 GPR183P32249 361 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 PSMB3P49720 205 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 PPT1P50897 306 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 TAS2R45P59539 299 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 RELQ04864 619 aaPredicted RBP6.68□□□□□ -1.34
TRAF3-209ENST00000560463 GCSAMLQ5JQS6 135 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 ZNF343Q6P1L6 599 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 UQCC3Q6UW78 93 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 CLEC19AQ6UXS0 136 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 ZNF600Q6ZNG1 722 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 Q71RC1 249 aaPredicted RBP6.68□□□□□ -1.34
TRAF3-209ENST00000560463 COMMD7Q86VX2 200 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 KLHDC1Q8N7A1 406 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 ZNF491Q8N8L2 437 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 TMEM37Q8WXS4 190 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 RNF125Q96EQ8 232 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 CCDC140Q96MF4 163 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 FAM210AQ96ND0 272 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 PBDC1Q9BVG4 233 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 KLK15Q9H2R5 256 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 SMDT1Q9H4I9 107 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 SLC25A22Q9H936 323 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 SEPSECSQ9HD40 501 aaKnown RBP6.68□□□□□ -1.34
TRAF3-209ENST00000560463 S4R3C0 116 aa6.68□□□□□ -1.34
TRAF3-209ENST00000560463 SETD2Q9BYW2 2564 aaPredicted RBP6.67□□□□□ -1.34
TRAF3-209ENST00000560463 IFNA1P01562 189 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 IGHV3-23P01764 117 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 C8orf88P0DMB2 117 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 ORM2P19652 201 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 ADMP35318 185 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 ARL3P36405 182 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 TAGLN2P37802 199 aaKnown RBP6.67□□□□□ -1.34
TRAF3-209ENST00000560463 DEFA5Q01523 94 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 KHDC3LQ587J8 217 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 LCN15Q6UWW0 184 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 PATE2Q6UY27 113 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 PQLC2Q6ZP29 291 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 SSX7Q7RTT5 188 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 LINC00305Q7Z4B0 112 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 ZNF329Q86UD4 541 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 SLC7A5P1Q8MH63 180 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 STXBP6Q8NFX7 210 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 OR1B1Q8NGR6 318 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 MYOZ3Q8TDC0 251 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 WFDC12Q8WWY7 111 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 UBE2E2Q96LR5 201 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 CHRDL1Q9BU40 450 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 TECRQ9NZ01 308 aaKnown RBP6.67□□□□□ -1.34
TRAF3-209ENST00000560463 MRPL27Q9P0M9 148 aaKnown RBP6.67□□□□□ -1.34
TRAF3-209ENST00000560463 HIGD1AQ9Y241 93 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 C2CD3Q4AC94 2353 aa6.67□□□□□ -1.34
TRAF3-209ENST00000560463 BMPR1BO00238 502 aa6.66□□□□□ -1.34
TRAF3-209ENST00000560463 NDUFA4O00483 81 aa6.66□□□□□ -1.34
TRAF3-209ENST00000560463 NDUFS6O75380 124 aaKnown RBP6.66□□□□□ -1.34
TRAF3-209ENST00000560463 IL4P05112 153 aa6.66□□□□□ -1.34
TRAF3-209ENST00000560463 LYZP61626 148 aa6.66□□□□□ -1.34
TRAF3-209ENST00000560463 KIAA0141Q14154 515 aaPredicted RBP6.66□□□□□ -1.34
TRAF3-209ENST00000560463 OR5AU1Q8NGC0 362 aa6.66□□□□□ -1.34
TRAF3-209ENST00000560463 OR4X2Q8NGF9 303 aa6.66□□□□□ -1.34
TRAF3-209ENST00000560463 TXNDC17Q9BRA2 123 aa6.66□□□□□ -1.34
TRAF3-209ENST00000560463 MANBALQ9NQG1 85 aa6.66□□□□□ -1.34
TRAF3-209ENST00000560463 TMEM167BQ9NRX6 74 aa6.66□□□□□ -1.34
TRAF3-209ENST00000560463 PEF1Q9UBV8 284 aaKnown RBP6.66□□□□□ -1.34
TRAF3-209ENST00000560463 PUS1Q9Y606 427 aaKnown RBP eCLIP6.66□□□□□ -1.34
TRAF3-209ENST00000560463 ARL2-SNX15V9GYD0 113 aa6.66□□□□□ -1.34
TRAF3-209ENST00000560463 A0A1B0GUS0 222 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms