RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 WFDC3Q8IUB2 231 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 GBGT1Q8N5D6 347 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 STPG3Q8N7X2 389 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 OR10P1Q8NGE3 313 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 OR51G1Q8NGK1 321 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 IL17DQ8TAD2 202 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 ENKURQ8TC29 256 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 MITD1Q8WV92 249 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 ST8SIA2Q92186 375 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 RNF125Q96EQ8 232 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 RAB40CQ96S21 281 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 PBDC1Q9BVG4 233 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 MAGT1Q9H0U3 335 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 WFDC10AQ9H1F0 79 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 MS4A6AQ9H2W1 248 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 VSIRQ9H7M9 311 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 PSENENQ9NZ42 101 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 GSKIPQ9P0R6 139 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 UBQLN2Q9UHD9 624 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 RABAC1Q9UI14 185 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 KIR2DL5BA0A0G2JN68 375 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 KIR2DL5BA0A0G2JPC4 375 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 SMCO3A2RU48 225 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 RBMY1BA6NDE4 496 aaKnown RBP3.26□□□□□ -1.89
SNX1-205ENST00000559339 C5orf51A6NDU8 294 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 RBMY1EA6NEQ0 496 aaKnown RBP3.26□□□□□ -1.89
SNX1-205ENST00000559339 MPTX1A8MV57 137 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 L7N2F9 121 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 SSSCA1O60232 199 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 TSC22D2O75157 780 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 UPK1BO75841 260 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 APOHP02749 345 aaPredicted RBP3.26□□□□□ -1.89
SNX1-205ENST00000559339 H2AFB2P0C5Z0 115 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 RBMY1DP0C7P1 496 aaKnown RBP3.26□□□□□ -1.89
SNX1-205ENST00000559339 PSG1P11464 419 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 LYL1P12980 280 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 PVALBP20472 110 aaPredicted RBP3.26□□□□□ -1.89
SNX1-205ENST00000559339 TAS2R30P59541 319 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 POLR2GP62487 172 aaKnown RBP eCLIP3.26□□□□□ -1.89
SNX1-205ENST00000559339 VAMP2P63027 116 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 ID3Q02535 119 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 ASAH1Q13510 395 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 SAMD13Q5VXD3 122 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 FAM90A2PQ658T7 463 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 OR8G2PQ6IF36 304 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 SIGLEC15Q6ZMC9 328 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 LINC00322Q6ZN03 302 aaPredicted RBP3.26□□□□□ -1.89
SNX1-205ENST00000559339 Q6ZWC4 215 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 STHQ8IWL8 128 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 KIR2DL5AQ8N109 375 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 STXBP6Q8NFX7 210 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 OR4D5Q8NGN0 318 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 KIR2DL5BQ8NHK3 375 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 MUC7Q8TAX7 377 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 ZNF431Q8TF32 576 aaPredicted RBP3.26□□□□□ -1.89
SNX1-205ENST00000559339 TMEM170AQ8WVE7 144 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 PPP1R14BQ96C90 147 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 SMIM8Q96KF7 97 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 TRGV9Q99603 122 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 GPN1Q9HCN4 374 aaPredicted RBP3.26□□□□□ -1.89
SNX1-205ENST00000559339 MRPL36Q9P0J6 103 aaKnown RBP3.26□□□□□ -1.89
SNX1-205ENST00000559339 MGAT4CQ9UBM8 478 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 FBXL17Q9UF56 701 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 RNF24Q9Y225 148 aa3.26□□□□□ -1.89
SNX1-205ENST00000559339 H3BP45 60 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 BUB3O43684 328 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 IL5P05113 134 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 RPL35AP18077 110 aaKnown RBP3.25□□□□□ -1.89
SNX1-205ENST00000559339 ID1P41134 155 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 BCAP31P51572 246 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 CAV2P51636 162 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 DEFB131AP59861 70 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 RAP2BP61225 183 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 LYZP61626 148 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 NUTF2P61970 127 aaKnown RBP3.25□□□□□ -1.89
SNX1-205ENST00000559339 ZNF90Q03938 601 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 RAB31Q13636 194 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 USF2Q15853 346 aaPredicted RBP3.25□□□□□ -1.89
SNX1-205ENST00000559339 ODF3L2Q3SX64 289 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 TMEM41BQ5BJD5 291 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 C1orf194Q5T5A4 169 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 LCE2AQ5TA79 106 aaPredicted RBP3.25□□□□□ -1.89
SNX1-205ENST00000559339 GSG1LQ6UXU4 331 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 ACOT7LQ6ZUV0 252 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 TMEM144Q7Z5S9 345 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 APRG1Q8IVJ8 170 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 OR8I2Q8N0Y5 310 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 LILRB2Q8N423 598 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 C12orf45Q8N5I9 185 aaPredicted RBP3.25□□□□□ -1.89
SNX1-205ENST00000559339 TMEM217Q8N7C4 229 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 ZBTB8BQ8NAP8 495 aaPredicted RBP3.25□□□□□ -1.89
SNX1-205ENST00000559339 BPIFCQ8NFQ6 507 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 ZNF414Q96IQ9 312 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 TMEM147Q9BVK8 224 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 GGACTQ9BVM4 153 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 CSTL1Q9H114 145 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 MAP6D1Q9H9H5 199 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 NPVFQ9HCQ7 196 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 NRN1Q9NPD7 142 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 TBC1D24Q9ULP9 559 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms