RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 NXPH3O95157 252 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 NTF3P20783 257 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 ODF3L1Q8IXM7 274 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 OR11H6Q8NGC7 330 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 ANAPC16Q96DE5 110 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 MRAP2Q96G30 205 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 HSD17B10Q99714 261 aaKnown RBP13.19□□□□□ -0.3
PBX1-215ENST00000559240 RPRMQ9NS64 109 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 HIST2H2BCQ6DN03 193 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 UFSP1Q6NVU6 142 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 STPG3Q8N7X2 389 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 OR2D2Q9H210 308 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 USF3Q68DE3 2245 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 J3QR06 171 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 IGLV1-47P01700 117 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 Q56UQ5 140 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 C5orf30Q96GV9 206 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 RCHY1Q96PM5 261 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 INSIG2Q9Y5U4 225 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 DOPEY2Q9Y3R5 2298 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 C7orf71A4D174 169 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 FBLL1A6NHQ2 334 aaKnown RBP13.18□□□□□ -0.3
PBX1-215ENST00000559240 FRMD6-AS1P0C7T7 363 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 F2RP25116 425 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 TMEM187Q14656 261 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 ZNF726P1Q15940 193 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 ZNF833PQ6ZTB9 187 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 TBC1D26Q86UD7 250 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 SGMS2Q8NHU3 365 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 FAM110AQ9BQ89 295 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 MRPL18Q9H0U6 180 aaKnown RBP13.18□□□□□ -0.3
PBX1-215ENST00000559240 PAX8Q06710 450 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 FAM53AQ6NSI3 398 aaPredicted RBP13.18□□□□□ -0.3
PBX1-215ENST00000559240 ADTRPQ96IZ2 230 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 CLEC7AQ9BXN2 247 aa13.18□□□□□ -0.3
PBX1-215ENST00000559240 C3orf85A0A1B0GTC6 90 aa13.17□□□□□ -0.3
PBX1-215ENST00000559240 GPR12P47775 334 aa13.17□□□□□ -0.3
PBX1-215ENST00000559240 JMJD8Q96S16 334 aa13.17□□□□□ -0.3
PBX1-215ENST00000559240 SSBP4Q9BWG4 385 aaPredicted RBP13.17□□□□□ -0.3
PBX1-215ENST00000559240 TMEM222Q9H0R3 208 aa13.17□□□□□ -0.3
PBX1-215ENST00000559240 GNB4Q9HAV0 340 aa13.17□□□□□ -0.3
PBX1-215ENST00000559240 LIN7CQ9NUP9 197 aaKnown RBP13.17□□□□□ -0.3
PBX1-215ENST00000559240 TMEM140Q9NV12 185 aa13.17□□□□□ -0.3
PBX1-215ENST00000559240 TCTEX1D4Q5JR98 221 aa13.17□□□□□ -0.3
PBX1-215ENST00000559240 OR10P1Q8NGE3 313 aa13.17□□□□□ -0.3
PBX1-215ENST00000559240 GNPNAT1Q96EK6 184 aaPredicted RBP13.17□□□□□ -0.3
PBX1-215ENST00000559240 SRSF8Q9BRL6 282 aaKnown RBP13.17□□□□□ -0.3
PBX1-215ENST00000559240 ODF3BA8MYP8 253 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 B4DSR2 109 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 SSSCA1O60232 199 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 PROP1O75360 226 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 PITX3O75364 302 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 PHLDA2Q53GA4 152 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 UTF1Q5T230 341 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 ABHD12Q8N2K0 398 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 MSI2Q96DH6 328 aaKnown RBP13.16□□□□□ -0.3
PBX1-215ENST00000559240 P2RX4Q99571 388 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 NPFFR1Q9GZQ6 430 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 GCN1Q92616 2671 aaKnown RBP13.16□□□□□ -0.3
PBX1-215ENST00000559240 TRAV9-2A0A087WT02 112 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 KIR2DS2P43631 304 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 CATR1Q13166 79 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 HCP5Q6MZN7 132 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 LIAT1Q6ZQX7 453 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 EAF1Q96JC9 268 aaPredicted RBP13.16□□□□□ -0.3
PBX1-215ENST00000559240 ONECUT1Q9UBC0 465 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 KCNS2Q9ULS6 477 aa13.16□□□□□ -0.3
PBX1-215ENST00000559240 AMMECR1Q9Y4X0 333 aaPredicted RBP13.16□□□□□ -0.3
PBX1-215ENST00000559240 CA2P00918 260 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 HLA-DRB5Q30154 266 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 GATAD1Q8WUU5 269 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 DDB2Q92466 427 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 RNF183Q96D59 192 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 TNFRSF18Q9Y5U5 241 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 MALRD1Q5VYJ5 2156 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 A0A087X0K7 114 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 PGPEP1LA6NFU8 196 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 CD5LO43866 347 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 MSMBP08118 114 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.3
PBX1-215ENST00000559240 CD300EQ496F6 205 aaPredicted RBP13.15□□□□□ -0.3
PBX1-215ENST00000559240 OR4F5Q8NH21 305 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 SERTAD4Q9NUC0 356 aa13.15□□□□□ -0.3
PBX1-215ENST00000559240 SAA2-SAA4A0A096LPE2 208 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 A0A1W2PS18 150 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 SAA2P0DJI9 122 aaPredicted RBP13.14□□□□□ -0.31
PBX1-215ENST00000559240 THBS3P49746 956 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 MEF2BQ02080 365 aaPredicted RBP13.14□□□□□ -0.31
PBX1-215ENST00000559240 ABHD14BQ96IU4 210 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 C18orf12Q96KH6 178 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 S1PR3Q99500 378 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 LY6LH3BQJ8 138 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 SERPINE2P07093 398 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 TMEM252Q8N6L7 170 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 H3BUT2 72 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 LINC01356Q8N9X3 169 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 BORCS7Q96B45 105 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 AP1S3Q96PC3 154 aa13.14□□□□□ -0.31
PBX1-215ENST00000559240 TRAV1-1A0A0B4J248 108 aa13.13□□□□□ -0.31
PBX1-215ENST00000559240 J3QLI3 93 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms