RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 STHQ8IWL8 128 aa12.42□□□□□ -0.42
LRRC28-210ENST00000558879 RNF125Q96EQ8 232 aa12.42□□□□□ -0.42
LRRC28-210ENST00000558879 TMED3Q9Y3Q3 217 aa12.42□□□□□ -0.42
LRRC28-210ENST00000558879 PRSS46E5RG02 174 aa12.41□□□□□ -0.42
LRRC28-210ENST00000558879 IFNA4P05014 189 aa12.41□□□□□ -0.42
LRRC28-210ENST00000558879 SPP1P10451 314 aa12.41□□□□□ -0.42
LRRC28-210ENST00000558879 C4BPBP20851 252 aa12.41□□□□□ -0.42
LRRC28-210ENST00000558879 AP2S1P53680 142 aaPredicted RBP12.41□□□□□ -0.42
LRRC28-210ENST00000558879 CEMP1Q6PRD7 247 aaPredicted RBP12.41□□□□□ -0.42
LRRC28-210ENST00000558879 OR51G1Q8NGK1 321 aa12.41□□□□□ -0.42
LRRC28-210ENST00000558879 OR11H2Q8NH07 326 aa12.41□□□□□ -0.42
LRRC28-210ENST00000558879 SLC35E1Q96K37 410 aa12.41□□□□□ -0.42
LRRC28-210ENST00000558879 SDHCQ99643 169 aaPredicted RBP12.41□□□□□ -0.42
LRRC28-210ENST00000558879 SEPSECSQ9HD40 501 aaKnown RBP12.41□□□□□ -0.42
LRRC28-210ENST00000558879 EPPK1P58107 5090 aaKnown RBP12.4□□□□□ -0.42
LRRC28-210ENST00000558879 IAPPP10997 89 aa12.4□□□□□ -0.42
LRRC28-210ENST00000558879 DHRS2Q13268 280 aa12.4□□□□□ -0.42
LRRC28-210ENST00000558879 BAK1Q16611 211 aa12.4□□□□□ -0.42
LRRC28-210ENST00000558879 TMEM41BQ5BJD5 291 aa12.4□□□□□ -0.42
LRRC28-210ENST00000558879 OR8G2PQ6IF36 304 aa12.4□□□□□ -0.42
LRRC28-210ENST00000558879 MORN3Q6PF18 240 aaPredicted RBP12.4□□□□□ -0.42
LRRC28-210ENST00000558879 SIGLEC15Q6ZMC9 328 aa12.4□□□□□ -0.42
LRRC28-210ENST00000558879 NRN1Q9NPD7 142 aa12.4□□□□□ -0.42
LRRC28-210ENST00000558879 IGKV1OR2-108A0A075B7D4 117 aa12.39□□□□□ -0.43
LRRC28-210ENST00000558879 NAP1L6A6NFF2 107 aa12.39□□□□□ -0.43
LRRC28-210ENST00000558879 ZFP92A6NM28 416 aa12.39□□□□□ -0.43
LRRC28-210ENST00000558879 KNCNA6PVL3 124 aa12.39□□□□□ -0.43
LRRC28-210ENST00000558879 NDUFB6O95139 128 aa12.39□□□□□ -0.43
LRRC28-210ENST00000558879 NUP62P37198 522 aaPredicted RBP12.39□□□□□ -0.43
LRRC28-210ENST00000558879 ZNF90Q03938 601 aa12.39□□□□□ -0.43
LRRC28-210ENST00000558879 GGNBP1Q5YKI7 109 aa12.39□□□□□ -0.43
LRRC28-210ENST00000558879 THAP8Q8NA92 274 aa12.39□□□□□ -0.43
LRRC28-210ENST00000558879 Q8NAQ8 132 aa12.39□□□□□ -0.43
LRRC28-210ENST00000558879 TRGV9Q99603 122 aa12.39□□□□□ -0.43
LRRC28-210ENST00000558879 SYNGR2O43760 224 aa12.38□□□□□ -0.43
LRRC28-210ENST00000558879 MED6O75586 246 aa12.38□□□□□ -0.43
LRRC28-210ENST00000558879 BTCP35070 178 aa12.38□□□□□ -0.43
LRRC28-210ENST00000558879 RAB11AP62491 216 aa12.38□□□□□ -0.43
LRRC28-210ENST00000558879 PSMG4Q5JS54 123 aa12.38□□□□□ -0.43
LRRC28-210ENST00000558879 PHLDA1Q8WV24 401 aaPredicted RBP12.38□□□□□ -0.43
LRRC28-210ENST00000558879 CIB3Q96Q77 187 aaPredicted RBP12.38□□□□□ -0.43
LRRC28-210ENST00000558879 C9orf170A2RU37 121 aa12.37□□□□□ -0.43
LRRC28-210ENST00000558879 ZNF705EA8MWA4 302 aaPredicted RBP12.37□□□□□ -0.43
LRRC28-210ENST00000558879 HOXB5P09067 269 aa12.37□□□□□ -0.43
LRRC28-210ENST00000558879 ACTL10Q5JWF8 245 aa12.37□□□□□ -0.43
LRRC28-210ENST00000558879 TRIQKQ629K1 86 aa12.37□□□□□ -0.43
LRRC28-210ENST00000558879 KMT2AQ03164 3969 aa12.36□□□□□ -0.43
LRRC28-210ENST00000558879 CSNK1G2-AS1Q8NCQ2 148 aa12.36□□□□□ -0.43
LRRC28-210ENST00000558879 RAB40CQ96S21 281 aa12.36□□□□□ -0.43
LRRC28-210ENST00000558879 PBDC1Q9BVG4 233 aa12.36□□□□□ -0.43
LRRC28-210ENST00000558879 MFFQ9GZY8 342 aa12.36□□□□□ -0.43
LRRC28-210ENST00000558879 MAGT1Q9H0U3 335 aa12.36□□□□□ -0.43
LRRC28-210ENST00000558879 KLK5Q9Y337 293 aaPredicted RBP12.36□□□□□ -0.43
LRRC28-210ENST00000558879 WRBO00258 174 aa12.35□□□□□ -0.43
LRRC28-210ENST00000558879 SOCS3O14543 225 aa12.35□□□□□ -0.43
LRRC28-210ENST00000558879 ADAP1O75689 374 aa12.35□□□□□ -0.43
LRRC28-210ENST00000558879 FABP1P07148 127 aa12.35□□□□□ -0.43
LRRC28-210ENST00000558879 NANOS2P60321 138 aaKnown RBP12.35□□□□□ -0.43
LRRC28-210ENST00000558879 LYZP61626 148 aa12.35□□□□□ -0.43
LRRC28-210ENST00000558879 SNRPD3P62318 126 aaKnown RBP12.35□□□□□ -0.43
LRRC28-210ENST00000558879 C1orf194Q5T5A4 169 aa12.35□□□□□ -0.43
LRRC28-210ENST00000558879 C11orf45Q8TAV5 145 aa12.35□□□□□ -0.43
LRRC28-210ENST00000558879 FLVCR2Q9UPI3 526 aa12.35□□□□□ -0.43
LRRC28-210ENST00000558879 X6R8D5 127 aa12.35□□□□□ -0.43
LRRC28-210ENST00000558879 IL7P13232 177 aa12.34□□□□□ -0.43
LRRC28-210ENST00000558879 NKX2-1P43699 371 aaPredicted RBP12.34□□□□□ -0.43
LRRC28-210ENST00000558879 INPP1P49441 399 aa12.34□□□□□ -0.43
LRRC28-210ENST00000558879 RPP30P78346 268 aaKnown RBP12.34□□□□□ -0.43
LRRC28-210ENST00000558879 ID3Q02535 119 aa12.34□□□□□ -0.43
LRRC28-210ENST00000558879 OR4D5Q8NGN0 318 aa12.34□□□□□ -0.43
LRRC28-210ENST00000558879 C7orf50Q9BRJ6 194 aaKnown RBP12.34□□□□□ -0.43
LRRC28-210ENST00000558879 HRH4Q9H3N8 390 aa12.34□□□□□ -0.43
LRRC28-210ENST00000558879 FBXL17Q9UF56 701 aa12.34□□□□□ -0.43
LRRC28-210ENST00000558879 PFDN2Q9UHV9 154 aa12.34□□□□□ -0.43
LRRC28-210ENST00000558879 BIRC6Q9NR09 4857 aa12.33□□□□□ -0.43
LRRC28-210ENST00000558879 IGHV4-28A0A0C4DH34 117 aa12.33□□□□□ -0.44
LRRC28-210ENST00000558879 SNRPGP15A8MWD9 76 aa12.33□□□□□ -0.44
LRRC28-210ENST00000558879 H3BMM0 161 aa12.33□□□□□ -0.44
LRRC28-210ENST00000558879 H3BP45 60 aa12.33□□□□□ -0.44
LRRC28-210ENST00000558879 DEFB4AO15263 64 aa12.33□□□□□ -0.44
LRRC28-210ENST00000558879 OR4E1P0C645 316 aa12.33□□□□□ -0.44
LRRC28-210ENST00000558879 RBMY1A1P0DJD3 496 aaKnown RBP12.33□□□□□ -0.44
LRRC28-210ENST00000558879 RBMY1CP0DJD4 496 aa12.33□□□□□ -0.44
LRRC28-210ENST00000558879 HLA-DRB4P13762 266 aa12.33□□□□□ -0.44
LRRC28-210ENST00000558879 MIFP14174 115 aa12.33□□□□□ -0.44
LRRC28-210ENST00000558879 RBMY1FQ15415 496 aaKnown RBP12.33□□□□□ -0.44
LRRC28-210ENST00000558879 WDR12Q9GZL7 423 aaKnown RBP12.33□□□□□ -0.44
LRRC28-210ENST00000558879 PAIP2BQ9ULR5 123 aaKnown RBP12.33□□□□□ -0.44
LRRC28-210ENST00000558879 HLA-DRB4X5D2U9 266 aa12.33□□□□□ -0.44
LRRC28-210ENST00000558879 LY6G6CO95867 125 aa12.32□□□□□ -0.44
LRRC28-210ENST00000558879 CFDP00746 253 aaPredicted RBP12.32□□□□□ -0.44
LRRC28-210ENST00000558879 OR2F1Q13607 317 aa12.32□□□□□ -0.44
LRRC28-210ENST00000558879 SPANXN5Q5MJ07 72 aa12.32□□□□□ -0.44
LRRC28-210ENST00000558879 ACOT7LQ6ZUV0 252 aa12.32□□□□□ -0.44
LRRC28-210ENST00000558879 COQ8AQ8NI60 647 aa12.32□□□□□ -0.44
LRRC28-210ENST00000558879 SLC45A2Q9UMX9 530 aa12.32□□□□□ -0.44
LRRC28-210ENST00000558879 PMS2P5A8MQ11 134 aa12.31□□□□□ -0.44
LRRC28-210ENST00000558879 PSMB3P49720 205 aa12.31□□□□□ -0.44
LRRC28-210ENST00000558879 POLR2GP62487 172 aaKnown RBP eCLIP12.31□□□□□ -0.44
LRRC28-210ENST00000558879 GDF5OSQ5U4N7 250 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms