RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SOCS3O14543 225 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 NPFFO15130 113 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 RHOGP84095 191 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 ZFP2Q6ZN57 461 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 KLHL30-AS1Q8NEE0 82 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 MRPL32Q9BYC8 188 aaKnown RBP3.04□□□□□ -1.92
ATXN3-248ENST00000558190 ASIPP42127 132 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 IGHV3-64A0A075B6Q5 118 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 PLA2G5P39877 138 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 LOXL2Q9Y4K0 774 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 V9GYV3 84 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 NCOR2Q9Y618 2525 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 IQSEC2Q5JU85 1478 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV3D-7A0A0C4DH55 119 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 C21orf140B9A014 251 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 TFF2Q03403 129 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 SP7Q8TDD2 431 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-248ENST00000558190 AHRRA9YTQ3 701 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 MT-ATP8P03928 68 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 PDLIM4P50479 330 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 CHCHD5Q9BSY4 110 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 DPM3Q9P2X0 92 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 PLAURQ03405 335 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 PRB3Q04118 309 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-248ENST00000558190 FAM120AOSQ5T036 256 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 FMC1Q96HJ9 113 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 ABCC6O95255 1503 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 TINCRA0A1B0GVN0 87 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 TMEM200BQ69YZ2 307 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 Q8N8P6 123 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 LY6G5BQ8NDX9 201 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 IGHV3-73A0A0B4J1V6 119 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 RSPO1Q2MKA7 263 aaPredicted RBP3.03□□□□□ -1.92
ATXN3-248ENST00000558190 MUSTN1Q8IVN3 82 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 TEX48A0A1B0GUV7 120 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 PRSS46E5RG02 174 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 KLF12Q9Y4X4 402 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 SAMD9LQ8IVG5 1584 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 RICTORQ6R327 1708 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 C15orf62A8K5M9 175 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 MAGEA5P43359 124 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 HAX1O00165 279 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF876PQ49A33 203 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 KLK10O43240 276 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 RFPL3SP0C7P2 107 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 GFRALQ6UXV0 394 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 MED12LQ86YW9 2145 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 LRRK1Q38SD2 2015 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 NFAT5O94916 1531 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 PIP4P2Q8N4L2 257 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 C20orf204Q6ZNR8 217 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 NRKQ7Z2Y5 1582 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 OR13A1Q8NGR1 328 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 ITLN1Q8WWA0 313 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 MYH4Q9Y623 1939 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 C21orf62Q9NYP8 219 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 ZFYVE26Q68DK2 2539 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 TRGV8A0A0C4DH27 118 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 RBMY1BA6NDE4 496 aaKnown RBP3.03□□□□□ -1.92
ATXN3-248ENST00000558190 RBMY1EA6NEQ0 496 aaKnown RBP3.03□□□□□ -1.92
ATXN3-248ENST00000558190 RBMY1DP0C7P1 496 aaKnown RBP3.03□□□□□ -1.92
ATXN3-248ENST00000558190 RBMY1A1P0DJD3 496 aaKnown RBP3.03□□□□□ -1.92
ATXN3-248ENST00000558190 RBMY1CP0DJD4 496 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 HAMPP81172 84 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF497Q6ZNH5 498 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 TOMM7Q9P0U1 55 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV1-27A0A075B6S5 117 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 A0A1B0GX51 115 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 DKK1O94907 266 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF415Q09FC8 603 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 ERCC8Q13216 396 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 FAM74A4Q5TZK3 123 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 DNAL4O96015 105 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 MYOD1P15172 320 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 LAMTOR3Q9UHA4 124 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 LINC01559Q495D7 138 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 Q8N1Y9 231 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF576Q9H609 170 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 TCRAP04437 139 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 TAL2Q16559 108 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 IFT172Q9UG01 1749 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 IGHV3OR16-12A0A075B7B8 117 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 C3orf36Q3SXR2 165 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 Q6P435 159 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 NCR2O95944 276 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 CELA2AP08217 269 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 ANKRD29Q8N6D5 301 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 CELA3AP09093 270 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 DAD1P61803 113 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 ZCCHC24Q8N2G6 241 aaKnown RBP3.03□□□□□ -1.92
ATXN3-248ENST00000558190 SRXN1Q9BYN0 137 aa3.03□□□□□ -1.92
ATXN3-248ENST00000558190 ZC2HC1BQ5TFG8 222 aa3.03□□□□□ -1.93
ATXN3-248ENST00000558190 MAFAQ8NHW3 353 aaPredicted RBP3.03□□□□□ -1.93
ATXN3-248ENST00000558190 JPT2Q9H910 190 aa3.03□□□□□ -1.93
ATXN3-248ENST00000558190 EVPLQ92817 2033 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 HLA-DMBP28068 263 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 NDUFV3P56181 108 aaKnown RBP3.02□□□□□ -1.93
ATXN3-248ENST00000558190 C1orf167Q5SNV9 1468 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 H0YJW9 148 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 RPUSD1Q9UJJ7 312 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms