RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	FOXA3	P55318	350 aa	Predicted RBP	4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	FBXW4	P57775	412 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	EIF3I	Q13347	325 aa	Known RBP	4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	C12orf74	Q32Q52	190 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	LINC00303	Q3SY05	128 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	ZNF506	Q5JVG8	444 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	FKBP1C	Q5VVH2	108 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	ACP7	Q6ZNF0	438 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839		Q6ZRU5	148 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	SH2D6	Q7Z4S9	175 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	RPS19BP1	Q86WX3	136 aa	Known RBP	4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	PPDPFL	Q8WWR9	84 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	UBE2E2	Q96LR5	201 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	CARD19	Q96LW7	228 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	EMC6	Q9BV81	110 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	HES7	Q9BYE0	225 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	ABRACL	Q9P1F3	81 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	PXMP4	Q9Y6I8	212 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	LOC285556	D6RIA3	1793 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	DENND4C	Q5VZ89	1909 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	SRCAP	Q6ZRS2	3230 aa		4.1	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	TRAV9-1	A0A075B6T8	112 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	FAM240A	A0A1B0GVK7	77 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839		A0A1W2PS18	150 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	C16orf97	H3BN30	126 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	APOM	O95445	188 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	PTHLH	P12272	177 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	PPIC	P45877	212 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	PSMB3	P49720	205 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	HERV-K104	P61576	105 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	PPP1CA	P62136	330 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	SP4	Q02446	784 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	PRDX1	Q06830	199 aa	Known RBP	4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	VMA21	Q3ZAQ7	101 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	SPANXN4	Q5MJ08	99 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	MRPL2	Q5T653	305 aa	Known RBP	4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	LYRM7	Q5U5X0	104 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	DNM1P46	Q6ZS02	220 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	OR10AC1	Q8NH08	325 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	SGMS2	Q8NHU3	365 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	SRSF12	Q8WXF0	261 aa	Known RBP	4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	ZNF501	Q96CX3	271 aa	Predicted RBP	4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	SLC25A44	Q96H78	314 aa	Predicted RBP	4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	FMC1	Q96HJ9	113 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	PRELID3A	Q96N28	172 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	NMES1	Q9C002	83 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	POLR2J2	Q9GZM3	115 aa	Known RBP	4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	NAA60	Q9H7X0	242 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	PLEKHF2	Q9H8W4	249 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	PDF	Q9HBH1	243 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	MANBAL	Q9NQG1	85 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	PRO0461	Q9UI25	63 aa		4.09	□□□□□ -1.75
RALGAPA1-215	ENST00000556839	SCN1A	P35498	2009 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	TRBV20-1	A0A075B6N2	111 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	IGHV4-61	A0A0C4DH41	118 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	NCBP2L	A6PVI3	153 aa	Known RBP	4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	NDUFC2-KCTD14	E9PQ53	114 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839		H7C1H1	209 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	MRPS12	O15235	138 aa	Known RBP	4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	ARL6IP5	O75915	188 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	IGHV4-59	P01825	116 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	APOC2	P02655	101 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	FGF6	P10767	208 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	CSRP3	P50461	194 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	SNRPG	P62308	76 aa	Known RBP	4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	SSBP1	Q04837	148 aa	Known RBP	4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	RIG	Q13278	110 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	TMEM30B	Q3MIR4	351 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839		Q56UQ5	140 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839		Q6ZVQ6	151 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839		Q71RC1	249 aa	Predicted RBP	4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	AAED1	Q7RTV5	226 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	HSD11B1L	Q7Z5J1	315 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	SPATA12	Q7Z6I5	190 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	TMEM179B	Q7Z7N9	219 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	TMEM256	Q8N2U0	113 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	ANKRD29	Q8N6D5	301 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	CYB561D1	Q8N8Q1	229 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	OR10G8	Q8NGN5	311 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	C11orf45	Q8TAV5	145 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	STAG3L4	Q8TBR4	150 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	MRPL30	Q8TCC3	161 aa	Known RBP	4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	ZPLD1	Q8TCW7	415 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	SSC4D	Q8WTU2	575 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	PPP1R1C	Q8WVI7	109 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	RBMXL1	Q96E39	390 aa	Known RBP	4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	C2orf48	Q96LS8	159 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	TMEM147	Q9BVK8	224 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	RTL8A	Q9BWD3	113 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	IMUP	Q9GZP8	106 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	CACNG5	Q9UF02	275 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	NEUROG3	Q9Y4Z2	214 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	DNAJC15	Q9Y5T4	150 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	NOTCH2	Q04721	2471 aa		4.08	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	CCDC88C	Q9P219	2028 aa		4.07	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	IGKV6D-21	A0A0A0MT36	114 aa		4.07	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	CCL15-CCL14	A0A0B4J2E2	113 aa		4.07	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	LYRM9	A8MSI8	78 aa		4.07	□□□□□ -1.76
RALGAPA1-215	ENST00000556839	TNFSF12	O43508	249 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms