RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 CISHQ9NSE2 258 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 LYRM2Q9NU23 88 aaPredicted RBP0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 MED29Q9NX70 200 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 CALML5Q9NZT1 146 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 RSL24D1Q9UHA3 163 aaKnown RBP0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 GNG8Q9UK08 70 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 DKKL1Q9UK85 242 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 TRAPPC2LQ9UL33 140 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 SSR3Q9UNL2 185 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 LAMTOR2Q9Y2Q5 125 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 NDUFAF1Q9Y375 327 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 AP4S1Q9Y587 144 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 LHFPL6Q9Y693 200 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 TCOF1Q13428 1488 aaKnown RBP0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 SNAPC4Q5SXM2 1469 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 CECR2Q9BXF3 1484 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 ERICH3Q5RHP9 1530 aa0.58□□□□□ -2.32
SUPT16H-206ENST00000556309 CPDO75976 1380 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 KTN1Q86UP2 1357 aaKnown RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 ANKRD36BQ8N2N9 1353 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 SYNMO15061 1565 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 BCL9O00512 1426 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 VPS8Q8N3P4 1428 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 RRBP1Q9P2E9 1410 aaKnown RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 RIMS1Q86UR5 1692 aaKnown RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 UHRF1BP1LA0JNW5 1464 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 A2MP01023 1474 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 NCAPD3P42695 1498 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 CCDC18Q5T9S5 1454 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 PNMA8CA0A1B0GUJ8 204 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 SMIM31A0A1B0GVY4 71 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 A0A1B0GW54 56 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 C20orf202A1L168 122 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 TMEM189A5PLL7 270 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 MAP1LC3B2A6NCE7 125 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 BBIP1A8MTZ0 92 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 C21orf140B9A014 251 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 F5H768 121 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 I3L521 148 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 J3KT08 172 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 M0R2Z0 102 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 GPR31O00270 319 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 PIRO00625 290 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 NDUFA2O43678 99 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 YPEL1O60688 119 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 OR2J2O76002 312 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 CNIH1O95406 144 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 HAND1O96004 215 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 TTRP02766 147 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 TCRBP04435 133 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 SERPINE1P05121 402 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 MSMBP08118 114 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 IL3P08700 152 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 CST2P09228 141 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 OR5G3P0C626 314 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 METTL15P1P0C7V9 234 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 HIST1H1DP16402 221 aaKnown RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 SPI1P17947 270 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 PPIBP23284 216 aaKnown RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 RPL12P30050 165 aaKnown RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 CSN1S1P47710 185 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 POLR2JP52435 117 aaKnown RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 TCL1AP56279 114 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 ERVS71-1P61550 626 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 HSPE1P61604 102 aaKnown RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 NCS1P62166 190 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 RANP62826 216 aaKnown RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 PPP3R1P63098 170 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 SELENOWP63302 87 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 IFITM2Q01629 132 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 MYL5Q02045 173 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 EMX2Q04743 252 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 FABP9Q0Z7S8 132 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 PPP1R1AQ13522 171 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 OR2F1Q13607 317 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 RSU1Q15404 277 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 TAF1AQ15573 450 aaPredicted RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 IAH1Q2TAA2 248 aaPredicted RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 HSD17B12Q53GQ0 312 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 TMEM128Q5BJH2 165 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 C1orf194Q5T5A4 169 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 BCL2L15Q5TBC7 163 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 SYPL2Q5VXT5 272 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 EIF5AL1Q6IS14 154 aaKnown RBP0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 C3orf62Q6ZUJ4 267 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 GTF2H5Q6ZYL4 71 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 PDZD9Q8IXQ8 264 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 TCTE3Q8IZS6 198 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 FAM24BQ8N5W8 94 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 TMEM156Q8N614 296 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 ACBD7Q8N6N7 88 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 OR4E2Q8NGC2 313 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 OR10X1Q8NGY0 326 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 PPTC7Q8NI37 304 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 ARL11Q969Q4 196 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 RAB37Q96AX2 223 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 GPR146Q96CH1 333 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 AP1S3Q96PC3 154 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 MCEEQ96PE7 176 aa0.57□□□□□ -2.32
SUPT16H-206ENST00000556309 C12orf57Q99622 126 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms