RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 IGHV1-46P01743 117 aa13.77□□□□□ -0.2
PPP4R3A-208ENST00000555462 WFDC3Q8IUB2 231 aa13.77□□□□□ -0.2
PPP4R3A-208ENST00000555462 ZNF430Q9H8G1 570 aaPredicted RBP13.77□□□□□ -0.2
PPP4R3A-208ENST00000555462 OR4C46A6NHA9 309 aa13.77□□□□□ -0.21
PPP4R3A-208ENST00000555462 LYNX1G3V0Z9 82 aa13.77□□□□□ -0.21
PPP4R3A-208ENST00000555462 K7EM74 188 aa13.77□□□□□ -0.21
PPP4R3A-208ENST00000555462 LYNX1P0DP58 116 aa13.77□□□□□ -0.21
PPP4R3A-208ENST00000555462 RAI1Q7Z5J4 1906 aaPredicted RBP13.77□□□□□ -0.21
PPP4R3A-208ENST00000555462 LOC389332A0A1B0GUA5 103 aa13.77□□□□□ -0.21
PPP4R3A-208ENST00000555462 ZNF329Q86UD4 541 aa13.77□□□□□ -0.21
PPP4R3A-208ENST00000555462 A0A087X0K7 114 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 UQCRFS1P47985 274 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 PRNTQ86SH4 94 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 OR4C5Q8NGB2 326 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 SARAFQ96BY9 339 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 LOXL4Q96JB6 756 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 PRR33A8MZF0 331 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 MT-ND6P03923 174 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 OR10J3Q5JRS4 329 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 PDPNQ86YL7 162 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 TEX45Q8NA69 505 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 CORO2AQ92828 525 aa13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 SLC25A10Q9UBX3 287 aaPredicted RBP13.76□□□□□ -0.21
PPP4R3A-208ENST00000555462 ESDP10768 282 aa13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 LYZP61626 148 aa13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 TMEM249Q2WGJ8 235 aa13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 CBY1Q9Y3M2 126 aa13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 J3QW42 95 aa13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 OR8B3Q8NGG8 313 aa13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 ALKBH7Q9BT30 221 aaPredicted RBP13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 BET1LQ9NYM9 111 aa13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 OR2T8A6NH00 312 aa13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 MBNL2Q5VZF2 373 aaKnown RBP13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 URB1-AS1Q96HZ7 61 aa13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
PPP4R3A-208ENST00000555462 CGB3P0DN86 165 aa13.74□□□□□ -0.21
PPP4R3A-208ENST00000555462 CGB7P0DN87 165 aa13.74□□□□□ -0.21
PPP4R3A-208ENST00000555462 GTSF1Q8WW33 167 aa13.74□□□□□ -0.21
PPP4R3A-208ENST00000555462 C17orf77Q96MU5 243 aa13.74□□□□□ -0.21
PPP4R3A-208ENST00000555462 ZNF257Q9Y2Q1 563 aa13.74□□□□□ -0.21
PPP4R3A-208ENST00000555462 IGHV3-35A0A0C4DH35 117 aa13.74□□□□□ -0.21
PPP4R3A-208ENST00000555462 ZNF891A8MT65 544 aaPredicted RBP13.74□□□□□ -0.21
PPP4R3A-208ENST00000555462 APOA2P02652 100 aa13.74□□□□□ -0.21
PPP4R3A-208ENST00000555462 OR1L8Q8NGR8 309 aa13.74□□□□□ -0.21
PPP4R3A-208ENST00000555462 NCOR2Q9Y618 2525 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 A0A1W2PRE2 83 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 C22orf46C9J442 243 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 IGLV1-44P01699 117 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 KLHDC1Q8N7A1 406 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 DAZAP1Q96EP5 407 aaKnown RBP13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 RPUSD1Q9UJJ7 312 aaKnown RBP13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 FCN3O75636 299 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 KIR2DS2P43631 304 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 GOLT1AQ6ZVE7 132 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 SP9P0CG40 484 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 AARDQ4LEZ3 155 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 FXYD5Q96DB9 178 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 MBD6Q96DN6 1003 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 CREBBPQ92793 2442 aa13.73□□□□□ -0.21
PPP4R3A-208ENST00000555462 TRBV9A0A0B4J1U6 114 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 A0A1W2PPI3 338 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 CGB1A6NKQ9 187 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 CHEK1O14757 476 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 RBP4P02753 201 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 NBEAP1P0C6P0 100 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 COX7A1P24310 79 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 MUC15Q8N387 334 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 ZNF596Q8TC21 504 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 PLSCR4Q9NRQ2 329 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 TRAV9-2A0A087WT02 112 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 DLL1O00548 723 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 P01737 135 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 TMEM200BQ69YZ2 307 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 MUC6Q6W4X9 2439 aa13.72□□□□□ -0.21
PPP4R3A-208ENST00000555462 SERTM2A0A1B0GWG4 89 aa13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 C2orf70A6NJV1 201 aa13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 H0YJW9 148 aa13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 KLF17Q5JT82 389 aaPredicted RBP13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 ZNF738Q8NE65 137 aa13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 ASCL3Q9NQ33 180 aa13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 CHD8Q9HCK8 2581 aa13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 IGKV1D-37A0A075B6S9 117 aa13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 LEPROTL1O95214 131 aa13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 COL8A1P27658 744 aa13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 SLC25A48Q6ZT89 311 aaKnown RBP13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 EPDR1Q9UM22 224 aa13.71□□□□□ -0.21
PPP4R3A-208ENST00000555462 FAM90A9PA6NNJ1 464 aa13.71□□□□□ -0.22
PPP4R3A-208ENST00000555462 LHBP01229 141 aa13.71□□□□□ -0.22
PPP4R3A-208ENST00000555462 FAM106CPP0CH98 169 aa13.71□□□□□ -0.22
PPP4R3A-208ENST00000555462 FAM106AQ4KMX7 169 aa13.71□□□□□ -0.22
PPP4R3A-208ENST00000555462 C2orf83Q53S99 150 aa13.71□□□□□ -0.22
PPP4R3A-208ENST00000555462 NDUFA4L2Q9NRX3 87 aa13.71□□□□□ -0.22
PPP4R3A-208ENST00000555462 CUL9Q8IWT3 2517 aa13.71□□□□□ -0.22
PPP4R3A-208ENST00000555462 LINC00614P0C842 121 aa13.7□□□□□ -0.22
PPP4R3A-208ENST00000555462 PSG1P11464 419 aa13.7□□□□□ -0.22
PPP4R3A-208ENST00000555462 TMEM70Q9BUB7 260 aa13.7□□□□□ -0.22
PPP4R3A-208ENST00000555462 COX11Q9Y6N1 276 aa13.7□□□□□ -0.22
PPP4R3A-208ENST00000555462 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.7□□□□□ -0.227e-7■■■■□ 26.2
PPP4R3A-208ENST00000555462 TRAV17A0A0B4J275 112 aa13.7□□□□□ -0.22
PPP4R3A-208ENST00000555462 IGHV1-24A0A0C4DH33 117 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms