RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 LIME1Q9H400 295 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 C1orf123Q9NWV4 160 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 LSM5Q9Y4Y9 91 aaKnown RBP3□□□□□ -1.93
LRFN5-204ENST00000554171 TRAV27A0A087WT01 109 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 TRAV1-2A0A0B4J238 106 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 IBA57-AS1B1ANH7 110 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 J3QR89 54 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 ANGPTL7O43827 346 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 HOXB7P09629 217 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 MAGEA5P43359 124 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 RPL23P62829 140 aaKnown RBP3□□□□□ -1.93
LRFN5-204ENST00000554171 ELOCQ15369 112 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 ANKRD29Q8N6D5 301 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 OR52N5Q8NH56 324 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 PRSS22Q9GZN4 317 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 ZNF665Q9H7R5 613 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 RABAC1Q9UI14 185 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 RPUSD1Q9UJJ7 312 aaKnown RBP3□□□□□ -1.93
LRFN5-204ENST00000554171 CENPFP49454 3210 aa3□□□□□ -1.93
LRFN5-204ENST00000554171 FAM181BA6NEQ2 426 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 FAM220BPB1ANY3 271 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 IGLL5B9A064 214 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 K7ESM1 405 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 SRSF10O75494 262 aaKnown RBP2.99□□□□□ -1.93
LRFN5-204ENST00000554171 DPM2O94777 84 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 GYPAP02724 150 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 RBMXP38159 391 aaKnown RBP2.99□□□□□ -1.93
LRFN5-204ENST00000554171 DMRTC1Q5HYR2 192 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 IGFL3Q6UXB1 125 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 PQLC2Q6ZP29 291 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 PHF5AQ7RTV0 110 aaKnown RBP2.99□□□□□ -1.93
LRFN5-204ENST00000554171 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.99□□□□□ -1.93
LRFN5-204ENST00000554171 TEN1Q86WV5 123 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 HCSTQ9UBK5 93 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 NSG2Q9Y328 171 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 UNC80Q8N2C7 3258 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 A8MWL6 223 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 NDUFC2-KCTD14E9PQ53 114 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 LGALS9O00182 355 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 FRMD6-AS1P0C7T7 363 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 LINC00032P0C843 101 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 CCL23P55773 120 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 TRIM40Q6P9F5 258 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 DSCR8Q96T75 97 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 FGF22Q9HCT0 170 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 HIGD1BQ9P298 99 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 ANAPC10Q9UM13 185 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 CSAG2Q9Y5P2 127 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 DOCK9Q9BZ29 2069 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 A6NIN4 97 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 LINC01619G3V211 115 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 SLC25A16P16260 332 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 PLPP4Q5VZY2 271 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 FGFBP3Q8TAT2 258 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 LRRC29Q8WV35 223 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 TRBV19A0A075B6N1 114 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 hCG_1818297A0A087WSY0 165 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 BMPR1BO00238 502 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 VPREB1P12018 145 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 SAA4P35542 130 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 GAGE2BQ13066 116 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 GAGE2EQ4V326 116 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 PAPPA-AS1Q5QFB9 102 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 ULBP3Q9BZM4 244 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 POLR2J2Q9GZM3 115 aaKnown RBP2.99□□□□□ -1.93
LRFN5-204ENST00000554171 R3HDMLQ9H3Y0 253 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 SAP30LQ9HAJ7 183 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 GAGE2DQ9UEU5 116 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 LINC00588Q9Y4M8 146 aa2.99□□□□□ -1.93
LRFN5-204ENST00000554171 IGKV1D-43A0A0B4J1Z2 117 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 A0A1B0GTL3 188 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 FAM240AA0A1B0GVK7 77 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 PSPNO60542 156 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 PEBP1P30086 187 aaKnown RBP2.98□□□□□ -1.93
LRFN5-204ENST00000554171 SNRPFP62306 86 aaKnown RBP2.98□□□□□ -1.93
LRFN5-204ENST00000554171 SUPT4H1P63272 117 aaKnown RBP2.98□□□□□ -1.93
LRFN5-204ENST00000554171 PAX8Q06710 450 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 LINC01545Q5VT33 79 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 MMD2Q8IY49 270 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.98□□□□□ -1.93
LRFN5-204ENST00000554171 OR10AC1Q8NH08 325 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 ZNF564Q8TBZ8 553 aaPredicted RBP2.98□□□□□ -1.93
LRFN5-204ENST00000554171 PPDPFLQ8WWR9 84 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 PRSS27Q9BQR3 290 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 TRAV9-1A0A075B6T8 112 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 SMKR1H3BMG3 65 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 M0R129 80 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 NDUFB4O95168 129 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 APOMO95445 188 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 BEAN1Q3B7T3 259 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 LGALS9BQ3B8N2 356 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 LGALS9CQ6DKI2 356 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 COX8CQ7Z4L0 72 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 SIGLECL1Q8N7X8 197 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 WFDC5Q8TCV5 224 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 Q96M66 194 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 SPANXDQ9BXN6 97 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 FAM60AQ9NP50 221 aa2.98□□□□□ -1.93
LRFN5-204ENST00000554171 ABRACLQ9P1F3 81 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms