RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 IGLC1P0CG04 106 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 MIFP14174 115 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 OR10J1P30954 320 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 CMC4P56277 68 aaPredicted RBP4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 OR2F1Q13607 317 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 FAM222AQ5U5X8 452 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 PRSS54Q6PEW0 395 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 C16orf54Q6UWD8 224 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 UBE2DNLQ8IWF7 75 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 GPR146Q96CH1 333 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 ABHD1Q96SE0 405 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 RNF126Q9BV68 326 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 PBDC1Q9BVG4 233 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 HRH4Q9H3N8 390 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 CACNG5Q9UF02 275 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 NACAE9PAV3 2078 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 IFNA10P01566 189 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 HNRNPCP07910 306 aaKnown RBP eCLIP4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 OR5AC1P0C628 307 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 SPP1P10451 314 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 GCSHP23434 173 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 RCVRNP35243 200 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 ZNF90Q03938 601 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 MORN3Q6PF18 240 aaPredicted RBP4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 SELENOHQ8IZQ5 122 aaKnown RBP4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 OR4B1Q8NGF8 309 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 OR4X1Q8NH49 305 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 ATP6V0BQ99437 205 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 NDUFAF3Q9BU61 184 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 ENY2Q9NPA8 101 aa4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 HEYLQ9NQ87 328 aaPredicted RBP4.85□□□□□ -1.63
PRPF40B-214ENST00000551320 SMIM31A0A1B0GVY4 71 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 CEBPZOSA8MTT3 80 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 ZNF705GA8MUZ8 300 aaPredicted RBP4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 AMBPP02760 352 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 PSG1P11464 419 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 S100GP29377 79 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 UCP3P55916 312 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 BSXQ3C1V8 233 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 RNASE10Q5GAN6 216 aaKnown RBP4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 TMEM88Q6PEY1 159 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 SIGLEC15Q6ZMC9 328 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 Q6ZR54 194 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 LINC00336Q6ZUF6 198 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 LHFPL1Q86WI0 220 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 C1orf158Q8N1D5 194 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 ZNF709Q8N972 641 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 BORCS5Q969J3 196 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 GRAMD2BQ96HH9 432 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 RTBDNQ9BSG5 229 aaPredicted RBP4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 PDCD10Q9BUL8 212 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 FUNDC2Q9BWH2 189 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 YTHDF1Q9BYJ9 559 aaKnown RBP4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 TMEM231Q9H6L2 316 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 COPZ2Q9P299 210 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 DNAH5Q8TE73 4624 aa4.84□□□□□ -1.63
PRPF40B-214ENST00000551320 IGKV1D-37A0A075B6S9 117 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 TRAV2A0A0B4J234 112 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 TEX13DA0A0J9YY54 714 aaPredicted RBP4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 A0A1W2PS18 150 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 DIRC3C9JPN6 131 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 BUB3O43684 328 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 IFNA21P01568 189 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 APOA1P02647 267 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 SNRPCP09234 159 aaKnown RBP4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 RD3LP0DJH9 198 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 P0DMU3 169 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 FAM231AP0DMU4 169 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 FAM231CP0DMU5 169 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 AZU1P20160 251 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 GATA2P23769 480 aaPredicted RBP4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 UCP1P25874 307 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 RND3P61587 244 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 LYZP61626 148 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 FAM78BQ5VT40 261 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 TMEM268Q5VZI3 342 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 LPCAT3Q6P1A2 487 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 ZNF705AQ6ZN79 300 aaPredicted RBP4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 CADM3Q8N126 398 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 CENPSQ8N2Z9 138 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 SLC24A4Q8NFF2 622 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 Q8WTZ3 238 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 GLYATL2Q8WU03 294 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 RRNAD1Q96FB5 475 aaKnown RBP4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 C17orf77Q96MU5 243 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 UHRF2Q96PU4 802 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 MIXL1Q9H2W2 232 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 Q9H521 79 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 NRN1Q9NPD7 142 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 EXTL2Q9UBQ6 330 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 DKK2Q9UBU2 259 aa4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 YTHDF2Q9Y5A9 579 aaKnown RBP4.83□□□□□ -1.64
PRPF40B-214ENST00000551320 TRAV12-2A0A075B6T6 113 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 LOC102723971A0A1B0GUV8 181 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 ZNF705FA8MVS1 300 aaPredicted RBP4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 M0R2Z0 102 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 CTDSP2O14595 271 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 RAB3DO95716 219 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 SPART-AS1P0CW21 52 aa4.82□□□□□ -1.64
PRPF40B-214ENST00000551320 DEFB130BP0DP73 79 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms