RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 SCGB1D2O95969 90 aa11.74□□□□□ -0.53
CHMP1A-206ENST00000549139 TOMM40O96008 361 aa11.74□□□□□ -0.53
CHMP1A-206ENST00000549139 MBPP02686 304 aaPredicted RBP11.74□□□□□ -0.53
CHMP1A-206ENST00000549139 CD5P06127 495 aa11.74□□□□□ -0.53
CHMP1A-206ENST00000549139 CD7P09564 240 aa11.74□□□□□ -0.53
CHMP1A-206ENST00000549139 GSG1LQ6UXU4 331 aa11.74□□□□□ -0.53
CHMP1A-206ENST00000549139 METTL26Q96S19 204 aa11.74□□□□□ -0.53
CHMP1A-206ENST00000549139 RNF2Q99496 336 aa11.74□□□□□ -0.53
CHMP1A-206ENST00000549139 IGKV1D-37A0A075B6S9 117 aa11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 IGHV3-49A0A0A0MS15 119 aa11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 A0A1W2PS18 150 aa11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 PMS2P5A8MQ11 134 aa11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 H3BP45 60 aa11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 TSC22D2O75157 780 aa11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 RD3LP0DJH9 198 aa11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 CRYBB3P26998 211 aa11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 IL15RAQ13261 267 aa11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 FAM90A2PQ658T7 463 aa11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 TMEM14EPQ6UXP3 125 aa11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 RCL1Q9Y2P8 373 aaKnown RBP11.73□□□□□ -0.53
CHMP1A-206ENST00000549139 ZFP92A6NM28 416 aa11.72□□□□□ -0.53
CHMP1A-206ENST00000549139 APOHP02749 345 aaPredicted RBP11.72□□□□□ -0.53
CHMP1A-206ENST00000549139 PSG1P11464 419 aa11.72□□□□□ -0.53
CHMP1A-206ENST00000549139 THAP8Q8NA92 274 aa11.72□□□□□ -0.53
CHMP1A-206ENST00000549139 IL17DQ8TAD2 202 aa11.72□□□□□ -0.53
CHMP1A-206ENST00000549139 ST8SIA2Q92186 375 aa11.72□□□□□ -0.53
CHMP1A-206ENST00000549139 TRGV9Q99603 122 aa11.72□□□□□ -0.53
CHMP1A-206ENST00000549139 TMEM231Q9H6L2 316 aa11.72□□□□□ -0.53
CHMP1A-206ENST00000549139 U3KQE9 123 aa11.72□□□□□ -0.53
CHMP1A-206ENST00000549139 KIAA1109Q2LD37 5005 aa11.72□□□□□ -0.53
CHMP1A-206ENST00000549139 IGHV3OR16-13A0A075B7E8 117 aa11.71□□□□□ -0.53
CHMP1A-206ENST00000549139 IGHV3-74A0A0B4J1X5 117 aa11.71□□□□□ -0.53
CHMP1A-206ENST00000549139 C7orf66A4D0T2 115 aa11.71□□□□□ -0.53
CHMP1A-206ENST00000549139 OR11H12B2RN74 326 aa11.71□□□□□ -0.53
CHMP1A-206ENST00000549139 K7EPK0 472 aa11.71□□□□□ -0.53
CHMP1A-206ENST00000549139 FABP1P07148 127 aa11.71□□□□□ -0.53
CHMP1A-206ENST00000549139 LILRB2Q8N423 598 aa11.71□□□□□ -0.53
CHMP1A-206ENST00000549139 OR51G1Q8NGK1 321 aa11.71□□□□□ -0.53
CHMP1A-206ENST00000549139 NARS2Q96I59 477 aaKnown RBP11.71□□□□□ -0.53
CHMP1A-206ENST00000549139 TUBA4BQ9H853 241 aa11.71□□□□□ -0.53
CHMP1A-206ENST00000549139 IGKV1OR2-108A0A075B7D4 117 aa11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 OR4C46A6NHA9 309 aa11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 L7N2F9 121 aa11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 IL4P05112 153 aa11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 HNRNPCP07910 306 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 VAMP2P63027 116 aa11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 ZNF90Q03938 601 aa11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 TCF24Q7RTU0 167 aa11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 TMEM144Q7Z5S9 345 aa11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 OR10P1Q8NGE3 313 aa11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 RETNQ9HD89 108 aa11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 LSM5Q9Y4Y9 91 aaKnown RBP11.7□□□□□ -0.54
CHMP1A-206ENST00000549139 IGHV3-66A0A0C4DH42 116 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 FNDC10F2Z333 226 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 DFFBO76075 338 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 METTL15P1P0C7V9 234 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 PVALBP20472 110 aaPredicted RBP11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 PAFAH1B2P68402 229 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 DLK1P80370 383 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 USF2Q15853 346 aaPredicted RBP11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 OR8G2PQ6IF36 304 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 LINC00322Q6ZN03 302 aaPredicted RBP11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 ACOT7LQ6ZUV0 252 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 DEFB125Q8N687 156 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 LINC00476Q8WZB0 136 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 RNF125Q96EQ8 232 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 GRAMD2BQ96HH9 432 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 FAM110AQ9BQ89 295 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 C11orf1Q9H5F2 150 aa11.69□□□□□ -0.54
CHMP1A-206ENST00000549139 RBMY1BA6NDE4 496 aaKnown RBP11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 RBMY1EA6NEQ0 496 aaKnown RBP11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 CCNKO75909 580 aa11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 PTTG1O95997 202 aa11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 CFDP00746 253 aaPredicted RBP11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 RBMY1DP0C7P1 496 aaKnown RBP11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 CMC4P56277 68 aaPredicted RBP11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 AKR1C1Q04828 323 aa11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 RAB32Q13637 225 aa11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 NMES1Q9C002 83 aa11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 NPVFQ9HCQ7 196 aa11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 RABAC1Q9UI14 185 aa11.68□□□□□ -0.54
CHMP1A-206ENST00000549139 TRAV2A0A0B4J234 112 aa11.67□□□□□ -0.54
CHMP1A-206ENST00000549139 GOSR2O14653 212 aa11.67□□□□□ -0.54
CHMP1A-206ENST00000549139 P2RY1P47900 373 aa11.67□□□□□ -0.54
CHMP1A-206ENST00000549139 CYCSP99999 105 aaKnown RBP11.67□□□□□ -0.54
CHMP1A-206ENST00000549139 C16orf54Q6UWD8 224 aa11.67□□□□□ -0.54
CHMP1A-206ENST00000549139 GGACTQ9BVM4 153 aa11.67□□□□□ -0.54
CHMP1A-206ENST00000549139 WFDC10AQ9H1F0 79 aa11.67□□□□□ -0.54
CHMP1A-206ENST00000549139 SRD5A3Q9H8P0 318 aa11.67□□□□□ -0.54
CHMP1A-206ENST00000549139 PFDN2Q9UHV9 154 aa11.67□□□□□ -0.54
CHMP1A-206ENST00000549139 IGKV3-7A0A075B6H7 116 aa11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 BUB3O43684 328 aa11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 SIX6O95475 246 aa11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 EIF2B2P49770 351 aaKnown RBP11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 BCAP31P51572 246 aa11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 AP2S1P53680 142 aaPredicted RBP11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 S100A10P60903 97 aa11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 RPL11P62913 178 aaKnown RBP11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 ARL16Q0P5N6 197 aa11.66□□□□□ -0.54
CHMP1A-206ENST00000549139 OR2F1Q13607 317 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms