RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PRR13Q9NZ81 148 aa6.85□□□□□ -1.31
YBX3-218ENST00000546298 KNCNA6PVL3 124 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 FAM90A26D6RGX4 464 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 BUB3O43684 328 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 SLC25A6P12236 298 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 VAMP1P23763 118 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 USF2Q15853 346 aaPredicted RBP6.84□□□□□ -1.31
YBX3-218ENST00000546298 PSMG4Q5JS54 123 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 ACTL10Q5JWF8 245 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 OR8G2PQ6IF36 304 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 SIGLEC15Q6ZMC9 328 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 LRTM2Q8N967 370 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 TRIM63Q969Q1 353 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 CIB3Q96Q77 187 aaPredicted RBP6.84□□□□□ -1.31
YBX3-218ENST00000546298 RAB40CQ96S21 281 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 C1QTNF4Q9BXJ3 329 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 NRN1Q9NPD7 142 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 FBXL17Q9UF56 701 aa6.84□□□□□ -1.31
YBX3-218ENST00000546298 HUWE1Q7Z6Z7 4374 aaKnown RBP6.83□□□□□ -1.32
YBX3-218ENST00000546298 SNRPGP15A8MWD9 76 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 PITX3O75364 302 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 SFT2D2O95562 160 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 CFDP00746 253 aaPredicted RBP6.83□□□□□ -1.32
YBX3-218ENST00000546298 MIFP14174 115 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 ID1P41134 155 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 INPP1P49441 399 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 TCTAP57738 103 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 NANOS2P60321 138 aaKnown RBP6.83□□□□□ -1.32
YBX3-218ENST00000546298 GAMTQ14353 236 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 SPANXN2Q5MJ10 180 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 RNF125Q96EQ8 232 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 PBDC1Q9BVG4 233 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 PAIP2BQ9ULR5 123 aaKnown RBP6.83□□□□□ -1.32
YBX3-218ENST00000546298 TMED3Q9Y3Q3 217 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 V9GYH0 126 aa6.83□□□□□ -1.32
YBX3-218ENST00000546298 NAP1L6A6NFF2 107 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 C11orf94C9JXX5 98 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 S100A7P31151 101 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 UBE2MP61081 183 aaKnown RBP6.82□□□□□ -1.32
YBX3-218ENST00000546298 C1orf194Q5T5A4 169 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 GGNBP1Q5YKI7 109 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 LGALS9CQ6DKI2 356 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 CCDC190Q86UF4 302 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 C2CD4CQ8TF44 421 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 PPP1R14BQ96C90 147 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 TRGV9Q99603 122 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 HRH4Q9H3N8 390 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 TBC1D24Q9ULP9 559 aa6.82□□□□□ -1.32
YBX3-218ENST00000546298 IGHV4-28A0A0C4DH34 117 aa6.81□□□□□ -1.32
YBX3-218ENST00000546298 ZNF705EA8MWA4 302 aaPredicted RBP6.81□□□□□ -1.32
YBX3-218ENST00000546298 ZNF701M0R085 212 aaPredicted RBP6.81□□□□□ -1.32
YBX3-218ENST00000546298 DEFB4AO15263 64 aa6.81□□□□□ -1.32
YBX3-218ENST00000546298 SYNGR2O43760 224 aa6.81□□□□□ -1.32
YBX3-218ENST00000546298 GIG44P09565 113 aaPredicted RBP6.81□□□□□ -1.32
YBX3-218ENST00000546298 IAPPP10997 89 aa6.81□□□□□ -1.32
YBX3-218ENST00000546298 NKX2-1P43699 371 aaPredicted RBP6.81□□□□□ -1.32
YBX3-218ENST00000546298 LYZP61626 148 aa6.81□□□□□ -1.32
YBX3-218ENST00000546298 PPP1R1AQ13522 171 aa6.81□□□□□ -1.32
YBX3-218ENST00000546298 ZNF79Q15937 498 aa6.81□□□□□ -1.32
YBX3-218ENST00000546298 SAMD13Q5VXD3 122 aa6.81□□□□□ -1.32
YBX3-218ENST00000546298 Q8NAQ8 132 aa6.81□□□□□ -1.32
YBX3-218ENST00000546298 IGKV1D-37A0A075B6S9 117 aa6.8□□□□□ -1.32
YBX3-218ENST00000546298 H3BMM0 161 aa6.8□□□□□ -1.32
YBX3-218ENST00000546298 HOXB5P09067 269 aa6.8□□□□□ -1.32
YBX3-218ENST00000546298 C4BPBP20851 252 aa6.8□□□□□ -1.32
YBX3-218ENST00000546298 ZNF90Q03938 601 aa6.8□□□□□ -1.32
YBX3-218ENST00000546298 OR2F1Q13607 317 aa6.8□□□□□ -1.32
YBX3-218ENST00000546298 RYR3Q15413 4870 aa6.8□□□□□ -1.32
YBX3-218ENST00000546298 SPATA31B1PQ5VZV4 182 aa6.8□□□□□ -1.32
YBX3-218ENST00000546298 TRIQKQ629K1 86 aa6.8□□□□□ -1.32
YBX3-218ENST00000546298 OR8I2Q8N0Y5 310 aa6.8□□□□□ -1.32
YBX3-218ENST00000546298 LINC00052Q96N35 136 aa6.8□□□□□ -1.32
YBX3-218ENST00000546298 TRAV10A0A0B4J240 114 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 CENPXA8MT69 81 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 WRBO00258 174 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 IFNA21P01568 189 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 RBMY1A1P0DJD3 496 aaKnown RBP6.79□□□□□ -1.32
YBX3-218ENST00000546298 RBMY1CP0DJD4 496 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 HLA-DRB4P13762 266 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 HLA-DMBP28068 263 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 GALR1P47211 349 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 PSMB3P49720 205 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 MEOX2P50222 304 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 RBMY1FQ15415 496 aaKnown RBP6.79□□□□□ -1.32
YBX3-218ENST00000546298 SPANXN5Q5MJ07 72 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 FOXI2Q6ZQN5 318 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 THAP8Q8NA92 274 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 CSNK1G2-AS1Q8NCQ2 148 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 BPIFCQ8NFQ6 507 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 COQ8AQ8NI60 647 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 SRRQ9GZT4 340 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 MAGT1Q9H0U3 335 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 CLEC5AQ9NY25 188 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 SLC45A2Q9UMX9 530 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 STRAPQ9Y3F4 350 aaKnown RBP6.79□□□□□ -1.32
YBX3-218ENST00000546298 HLA-DRB4X5D2U9 266 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 X6R8D5 127 aa6.79□□□□□ -1.32
YBX3-218ENST00000546298 C9orf170A2RU37 121 aa6.78□□□□□ -1.32
YBX3-218ENST00000546298 SMIM9A6NGZ8 99 aa6.78□□□□□ -1.32
YBX3-218ENST00000546298 IGLL5B9A064 214 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms