RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 PKHD1P08F94 4074 aa8.61□□□□□ -1.03
GABPB1-206ENST00000543881 H3BMQ9 156 aa8.61□□□□□ -1.03
GABPB1-206ENST00000543881 RGS13O14921 159 aa8.61□□□□□ -1.03
GABPB1-206ENST00000543881 SCGB2A1O75556 95 aa8.61□□□□□ -1.03
GABPB1-206ENST00000543881 SULT1A3P0DMM9 295 aa8.61□□□□□ -1.03
GABPB1-206ENST00000543881 SULT1A4P0DMN0 295 aa8.61□□□□□ -1.03
GABPB1-206ENST00000543881 C4BPBP20851 252 aa8.61□□□□□ -1.03
GABPB1-206ENST00000543881 Q8NAQ8 132 aa8.61□□□□□ -1.03
GABPB1-206ENST00000543881 Q8WTZ3 238 aa8.61□□□□□ -1.03
GABPB1-206ENST00000543881 BCL7BQ9BQE9 202 aa8.61□□□□□ -1.03
GABPB1-206ENST00000543881 RSL24D1Q9UHA3 163 aaKnown RBP8.61□□□□□ -1.03
GABPB1-206ENST00000543881 FABP12A6NFH5 140 aa8.6□□□□□ -1.03
GABPB1-206ENST00000543881 IGLL5B9A064 214 aa8.6□□□□□ -1.03
GABPB1-206ENST00000543881 RBMY1A1P0DJD3 496 aaKnown RBP8.6□□□□□ -1.03
GABPB1-206ENST00000543881 RBMY1CP0DJD4 496 aa8.6□□□□□ -1.03
GABPB1-206ENST00000543881 AKR1C4P17516 323 aa8.6□□□□□ -1.03
GABPB1-206ENST00000543881 RBMY1FQ15415 496 aaKnown RBP8.6□□□□□ -1.03
GABPB1-206ENST00000543881 ACY3Q96HD9 319 aa8.6□□□□□ -1.03
GABPB1-206ENST00000543881 NARS2Q96I59 477 aaKnown RBP8.6□□□□□ -1.03
GABPB1-206ENST00000543881 RBKSQ9H477 322 aa8.6□□□□□ -1.03
GABPB1-206ENST00000543881 MCUBQ9NWR8 336 aa8.6□□□□□ -1.03
GABPB1-206ENST00000543881 HSPB7Q9UBY9 170 aa8.6□□□□□ -1.03
GABPB1-206ENST00000543881 SCP2D1Q9UJQ7 156 aa8.6□□□□□ -1.03
GABPB1-206ENST00000543881 KCNIP3Q9Y2W7 256 aa8.6□□□□□ -1.03
GABPB1-206ENST00000543881 hCG_2014768A0A024R1R8 64 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 A0A0B4J2A0 478 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 LOC105371267A0A1B0GV96 52 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 FAM25EA8MYX2 175 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 TOMM40O96008 361 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 IL4P05112 153 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 CCR6P51684 374 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 DHRS2Q13268 280 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 SMCO1Q147U7 214 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 ACTL10Q5JWF8 245 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 ETFRF1Q6IPR1 90 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 RAB40CQ96S21 281 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 SHPKQ9UHJ6 478 aa8.59□□□□□ -1.03
GABPB1-206ENST00000543881 IGHV4-28A0A0C4DH34 117 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 HELTA6NFD8 242 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 BUB3O43684 328 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 IFNA10P01566 189 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 RD3LP0DJH9 198 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 SPP1P10451 314 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 PSG1P11464 419 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 KLF9Q13886 244 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-206ENST00000543881 PSMG4Q5JS54 123 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 MORN3Q6PF18 240 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-206ENST00000543881 CSNK1G2-AS1Q8NCQ2 148 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 MCFD2Q8NI22 146 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 DTD1Q8TEA8 209 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 TRIM63Q969Q1 353 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 SCGB3A2Q96PL1 93 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 CLEC5AQ9NY25 188 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 U3KQ87 197 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 X6R8D5 127 aa8.58□□□□□ -1.04
GABPB1-206ENST00000543881 IGKV1D-37A0A075B6S9 117 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 ZNF705EA8MWA4 302 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-206ENST00000543881 FAM90A26D6RGX4 464 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 NOXA1Q86UR1 476 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 LGI3Q8N145 548 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 OR51G1Q8NGK1 321 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 CACFD1Q9UGQ2 172 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 FAT2Q9NYQ8 4349 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 ELOA3CA0A087WX78 387 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-206ENST00000543881 PRSS29PA6NIE9 313 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 C11orf94C9JXX5 98 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 PITX3O75364 302 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 EIF2B2P49770 351 aaKnown RBP8.57□□□□□ -1.04
GABPB1-206ENST00000543881 AP2S1P53680 142 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-206ENST00000543881 ZNF90Q03938 601 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 GAMTQ14353 236 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 TMEM41BQ5BJD5 291 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 SIGLEC15Q6ZMC9 328 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 NRN1Q9NPD7 142 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 V9GYH0 126 aa8.57□□□□□ -1.04
GABPB1-206ENST00000543881 DNAH2Q9P225 4427 aa8.56□□□□□ -1.04
GABPB1-206ENST00000543881 NOL3O60936 208 aaKnown RBP8.56□□□□□ -1.04
GABPB1-206ENST00000543881 MIFP14174 115 aa8.56□□□□□ -1.04
GABPB1-206ENST00000543881 ZNF79Q15937 498 aa8.56□□□□□ -1.04
GABPB1-206ENST00000543881 GSG1LQ6UXU4 331 aa8.56□□□□□ -1.04
GABPB1-206ENST00000543881 TMED4Q7Z7H5 227 aa8.56□□□□□ -1.04
GABPB1-206ENST00000543881 SLC51BQ86UW2 128 aa8.56□□□□□ -1.04
GABPB1-206ENST00000543881 OR1S1Q8NH92 325 aa8.56□□□□□ -1.04
GABPB1-206ENST00000543881 RNF125Q96EQ8 232 aa8.56□□□□□ -1.04
GABPB1-206ENST00000543881 HRH4Q9H3N8 390 aa8.56□□□□□ -1.04
GABPB1-206ENST00000543881 H3BMM0 161 aa8.55□□□□□ -1.04
GABPB1-206ENST00000543881 ANXA3P12429 323 aa8.55□□□□□ -1.04
GABPB1-206ENST00000543881 GPX4P36969 197 aaPredicted RBP8.55□□□□□ -1.04
GABPB1-206ENST00000543881 DEFB1P60022 68 aa8.55□□□□□ -1.04
GABPB1-206ENST00000543881 SRPXP78539 464 aa8.55□□□□□ -1.04
GABPB1-206ENST00000543881 PYDC2Q56P42 97 aa8.55□□□□□ -1.04
GABPB1-206ENST00000543881 LINC00299Q6ZSB3 139 aa8.55□□□□□ -1.04
GABPB1-206ENST00000543881 PBDC1Q9BVG4 233 aa8.55□□□□□ -1.04
GABPB1-206ENST00000543881 SEPSECSQ9HD40 501 aaKnown RBP8.55□□□□□ -1.04
GABPB1-206ENST00000543881 TBC1D24Q9ULP9 559 aa8.55□□□□□ -1.04
GABPB1-206ENST00000543881 IGKV1OR2-108A0A075B7D4 117 aa8.54□□□□□ -1.04
GABPB1-206ENST00000543881 ZFP92A6NM28 416 aa8.54□□□□□ -1.04
GABPB1-206ENST00000543881 RTL8CO15255 209 aa8.54□□□□□ -1.04
GABPB1-206ENST00000543881 IAPPP10997 89 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms