RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	C20orf24	Q9BUV8	137 aa		9.16	□□□□□ -0.94
DDB1-223	ENST00000543658	PBDC1	Q9BVG4	233 aa		9.16	□□□□□ -0.94
DDB1-223	ENST00000543658	GGTLC1	Q9BX51	225 aa		9.16	□□□□□ -0.94
DDB1-223	ENST00000543658	WFDC1	Q9HC57	220 aa		9.16	□□□□□ -0.94
DDB1-223	ENST00000543658	PUS1	Q9Y606	427 aa	Known RBP eCLIP	9.16	□□□□□ -0.94
DDB1-223	ENST00000543658	IGKV1D-37	A0A075B6S9	117 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	IGKV1OR2-108	A0A075B7D4	117 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	ZNF320	A2RRD8	509 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	IGKV1-17	P01599	117 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	IL4	P05112	153 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	LINC00869	P0C866	280 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	PSG1	P11464	419 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	HOXD3	P31249	432 aa	Predicted RBP	9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	ADM	P35318	185 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	SLURP1	P55000	103 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	B2M	P61769	119 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	ZNF90	Q03938	601 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	SLC51B	Q86UW2	128 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	C1QL4	Q86Z23	238 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	NARS2	Q96I59	477 aa	Known RBP	9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	RAX2	Q96IS3	184 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	RSG1	Q9BU20	258 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	PEMT	Q9UBM1	199 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	UFC1	Q9Y3C8	167 aa		9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	LSM4	Q9Y4Z0	139 aa	Known RBP	9.15	□□□□□ -0.94
DDB1-223	ENST00000543658	ADARB2-AS1	A8MUL3	147 aa		9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	TSPAN15	O95858	294 aa		9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	RPL29	P47914	159 aa	Known RBP	9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	PXDC1	Q5TGL8	231 aa		9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	MIC13	Q5XKP0	118 aa		9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	EIF5AL1	Q6IS14	154 aa	Known RBP	9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	GPHB5	Q86YW7	130 aa		9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	STPG3	Q8N7X2	389 aa		9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	OR1B1	Q8NGR6	318 aa		9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	PFDN2	Q9UHV9	154 aa		9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	TIMM9	Q9Y5J7	89 aa		9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	PXMP4	Q9Y6I8	212 aa		9.14	□□□□□ -0.95
DDB1-223	ENST00000543658	WNK1	Q9H4A3	2382 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	ATR	Q13535	2644 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	COX7A2P2	O60397	106 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	OR5G3	P0C626	314 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	GATA2	P23769	480 aa	Predicted RBP	9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	ATP6V0C	P27449	155 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	BMI1	P35226	326 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	ELL	P55199	621 aa	Predicted RBP	9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	SYNJ2BP	P57105	145 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	FHL3	Q13643	280 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	ACOT6	Q3I5F7	207 aa	Predicted RBP	9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	FFAR4	Q5NUL3	377 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	BAP18	Q8IXM2	172 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	OR1L4	Q8NGR5	311 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	OR2G3	Q8NGZ4	309 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	TMEM190	Q8WZ59	177 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	RNF125	Q96EQ8	232 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	METTL26	Q96S19	204 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	PFDN5	Q99471	154 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	PSMG3	Q9BT73	122 aa	Predicted RBP	9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	CYTL1	Q9NRR1	136 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	SLC39A9	Q9NUM3	307 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	RABAC1	Q9UI14	185 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	SLC45A2	Q9UMX9	530 aa		9.13	□□□□□ -0.95
DDB1-223	ENST00000543658	IGHV3OR16-8	A0A075B7F1	116 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	LGALS9	O00182	355 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	OVOL1	O14753	267 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	MB	P02144	154 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	ORM2	P19652	201 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	AKR1C8P	Q5T2L2	129 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	LAMTOR1	Q6IAA8	161 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	TOMM20L	Q6UXN7	152 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	REC114	Q7Z4M0	266 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	STOML3	Q8TAV4	291 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	ST8SIA2	Q92186	375 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	RCC1L	Q96I51	464 aa	Known RBP	9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	MDFI	Q99750	246 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	ELOVL1	Q9BW60	279 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	SLC25A32	Q9H2D1	315 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	DAZ1	Q9NQZ3	744 aa	Known RBP	9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	DOK5	Q9P104	306 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	HIGD1A	Q9Y241	93 aa		9.12	□□□□□ -0.95
DDB1-223	ENST00000543658	ELOA3C	A0A087WX78	387 aa	Predicted RBP	9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	WI2-2373I1.2	A0A1W2PRP0	233 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	HYPM	O75409	117 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	NPPC	P23582	126 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	SERF2	P84101	59 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	PRR20E	P86478	221 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	PRR20C	P86479	221 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	PRR20D	P86480	221 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	PRR20B	P86481	221 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	PRR20A	P86496	221 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	KLF5	Q13887	457 aa	Predicted RBP	9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	C10orf113	Q5VZT2	155 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	TMEM182	Q6ZP80	229 aa	Predicted RBP	9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	DLX4	Q92988	240 aa	Predicted RBP	9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	SH3BGRL3	Q9H299	93 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	TMEM231	Q9H6L2	316 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	ZFAND3	Q9H8U3	227 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658	RNF24	Q9Y225	148 aa		9.11	□□□□□ -0.95
DDB1-223	ENST00000543658		A0A1W2PS18	150 aa		9.1	□□□□□ -0.95
DDB1-223	ENST00000543658		A8MWP6	167 aa		9.1	□□□□□ -0.95
DDB1-223	ENST00000543658	ZNF207	O43670	478 aa	Known RBP	9.1	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms