RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 LGALS7P47929 136 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 EBLN2Q6P2I7 272 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 WNT10AQ9GZT5 417 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 LAMA5O15230 3695 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 DMXL2Q8TDJ6 3036 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 TRAV34A0A0B4J273 112 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 C19orf71A6NCJ1 209 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 E7EUB6 86 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 NDUFB8O95169 186 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 LTAP01374 205 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 REG1BP48304 166 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 TFPI2P48307 235 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 ALKBH2Q6NS38 261 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 RNASEKQ6P5S7 137 aaKnown RBP11.04□□□□□ -0.64
VPS33A-208ENST00000543633 TMEM70Q9BUB7 260 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 IGHV1-69-2A0A0G2JMI3 117 aa11.03□□□□□ -0.64
VPS33A-208ENST00000543633 TRBV6-1A0A0K0K1D8 114 aa11.03□□□□□ -0.64
VPS33A-208ENST00000543633 A0A1W2PPI3 338 aa11.03□□□□□ -0.64
VPS33A-208ENST00000543633 C17orf100A8MU93 164 aa11.03□□□□□ -0.64
VPS33A-208ENST00000543633 TMEM200BQ69YZ2 307 aa11.03□□□□□ -0.64
VPS33A-208ENST00000543633 ZNF841Q6ZN19 808 aa11.03□□□□□ -0.64
VPS33A-208ENST00000543633 SSX8Q7RTT4 187 aa11.03□□□□□ -0.64
VPS33A-208ENST00000543633 TEX45Q8NA69 505 aa11.03□□□□□ -0.64
VPS33A-208ENST00000543633 TMEM116Q8NCL8 245 aa11.03□□□□□ -0.64
VPS33A-208ENST00000543633 ST20Q9HBF5 79 aa11.03□□□□□ -0.64
VPS33A-208ENST00000543633 SPTBN2O15020 2390 aa11.03□□□□□ -0.64
VPS33A-208ENST00000543633 GP9P14770 177 aa11.02□□□□□ -0.64
VPS33A-208ENST00000543633 DEFB109BQ30KR1 87 aa11.02□□□□□ -0.64
VPS33A-208ENST00000543633 PRR27Q6MZM9 219 aa11.02□□□□□ -0.64
VPS33A-208ENST00000543633 TMEM108Q6UXF1 575 aa11.02□□□□□ -0.64
VPS33A-208ENST00000543633 IGLC7A0M8Q6 106 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 PGPA6NDG6 321 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 NPIPB6E9PJ23 425 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 P01737 135 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 OR5AL1P0C617 328 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 NBEAP1P0C6P0 100 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 CCL3L1P16619 93 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 GNG5P63218 68 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 FOXC1Q12948 553 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 RBPMS2Q6ZRY4 209 aaKnown RBP11.02□□□□□ -0.65
VPS33A-208ENST00000543633 MUC15Q8N387 334 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 OR2D3Q8NGH3 330 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 SCNM1Q9BWG6 230 aa11.02□□□□□ -0.65
VPS33A-208ENST00000543633 PPIAL4EA0A075B759 164 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 VWC2LB2RUY7 222 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 C22orf46C9J442 243 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 PPIAL4DF5H284 164 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 TNFRSF13BO14836 293 aaPredicted RBP11.01□□□□□ -0.65
VPS33A-208ENST00000543633 PPIAL4FP0DN26 164 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 Q56UQ5 140 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 LRRC10Q5BKY1 277 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 C10orf55Q5SWW7 151 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 FAM120AOSQ5T036 256 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 LCN12Q6JVE5 192 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 Q6ZS92 163 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 TNFRSF14Q92956 283 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 MRPL36Q9P0J6 103 aaKnown RBP11.01□□□□□ -0.65
VPS33A-208ENST00000543633 PPIAL4AQ9Y536 164 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 COX11Q9Y6N1 276 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 TMEM178BH3BS89 294 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 NDUFB3O43676 98 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 MOSP00540 346 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 TCRAP04437 139 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 DLX6P56179 175 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 MRGPRG-AS1Q2M3A8 158 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 ZNF738Q8NE65 137 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 URB1-AS1Q96HZ7 61 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 OTORQ9NRC9 128 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 TMEM14CQ9P0S9 112 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 MGAQ8IWI9 3026 aa11.01□□□□□ -0.65
VPS33A-208ENST00000543633 IGLL1P15814 213 aa11□□□□□ -0.65
VPS33A-208ENST00000543633 CAMPP49913 170 aa11□□□□□ -0.65
VPS33A-208ENST00000543633 CCL8P80075 99 aa11□□□□□ -0.65
VPS33A-208ENST00000543633 OR4F17Q8NGA8 305 aa11□□□□□ -0.65
VPS33A-208ENST00000543633 OR1B1Q8NGR6 318 aa11□□□□□ -0.65
VPS33A-208ENST00000543633 NDFIP1Q9BT67 221 aa11□□□□□ -0.65
VPS33A-208ENST00000543633 SSBP4Q9BWG4 385 aaPredicted RBP11□□□□□ -0.65
VPS33A-208ENST00000543633 KAAG1Q9UBP8 84 aa11□□□□□ -0.65
VPS33A-208ENST00000543633 KLK10O43240 276 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 SLC25A17O43808 307 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 HOXB4P17483 251 aaPredicted RBP10.99□□□□□ -0.65
VPS33A-208ENST00000543633 GPR6P46095 362 aaPredicted RBP10.99□□□□□ -0.65
VPS33A-208ENST00000543633 RPL27AP46776 148 aaKnown RBP10.99□□□□□ -0.65
VPS33A-208ENST00000543633 ADIPOQQ15848 244 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 C16orf54Q6UWD8 224 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 ATOH7Q8N100 152 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 RPRMLQ8N4K4 120 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 C8orf46Q8TAG6 207 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 DAZAP1Q96EP5 407 aaKnown RBP10.99□□□□□ -0.65
VPS33A-208ENST00000543633 TCF21O43680 179 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 FCN3O75636 299 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 LIPFP07098 398 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 ORM2P19652 201 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 TMEM155Q4W5P6 130 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 TCF24Q7RTU0 167 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 Q86TA4 180 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 GATD1Q8NB37 220 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 FAM57AQ8TBR7 257 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 BLNKQ8WV28 456 aa10.99□□□□□ -0.65
VPS33A-208ENST00000543633 Q9H3A6 140 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms