RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 THYN1Q9P016 225 aa6.51□□□□□ -1.37
USP28-205ENST00000537706 IGKV3-7A0A075B6H7 116 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 TRDCB7Z8K6 153 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 NDUFA4O00483 81 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 DIRAS3O95661 229 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 FXYD4P59646 89 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 RND3P61587 244 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 IL15RAQ13261 267 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 ZNF880Q6PDB4 577 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 ALKAL2Q6UX46 152 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 SSX9Q7RTT3 188 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 COMMD7Q86VX2 200 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 ST8SIA2Q92186 375 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 PHYHIPLQ96FC7 376 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 OR10C1Q96KK4 312 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 MED9Q9NWA0 146 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 VPS13BQ7Z7G8 4022 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 HMCN2Q8NDA2 5059 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 NMBP08949 121 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 HOXB5P09067 269 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 OR5AC1P0C628 307 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 SRPXP78539 464 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 HLA-DRB3P79483 266 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 IGSF11Q5DX21 431 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 LEMD1Q68G75 181 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 TMEM88Q6PEY1 159 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 STOML3Q8TAV4 291 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 ARPC5LQ9BPX5 153 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 NIPSNAP3BQ9BS92 247 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 CABLES2Q9BTV7 478 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 C1QTNF4Q9BXJ3 329 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 ZNF430Q9H8G1 570 aaPredicted RBP6.5□□□□□ -1.37
USP28-205ENST00000537706 SMPXQ9UHP9 88 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 KCNIP3Q9Y2W7 256 aa6.5□□□□□ -1.37
USP28-205ENST00000537706 H0YIZ8 118 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 RLN2P04090 185 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 RPL27AP46776 148 aaKnown RBP6.49□□□□□ -1.37
USP28-205ENST00000537706 DLK1P80370 383 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 IAH1Q2TAA2 248 aaPredicted RBP6.49□□□□□ -1.37
USP28-205ENST00000537706 PHLDA2Q53GA4 152 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 SPSB3Q6PJ21 355 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 LGI3Q8N145 548 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 GBGT1Q8N5D6 347 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 TMEM116Q8NCL8 245 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 OR4A4PQ8NGN8 299 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 OSR1Q8TAX0 266 aaPredicted RBP6.49□□□□□ -1.37
USP28-205ENST00000537706 ADTRPQ96IZ2 230 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 FANCD2OSQ96PS1 177 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 AQP10Q96PS8 301 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 RNF2Q99496 336 aa6.49□□□□□ -1.37
USP28-205ENST00000537706 IGKV1-6A0A0C4DH72 117 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 SRRM4A7MD48 611 aaKnown RBP6.48□□□□□ -1.37
USP28-205ENST00000537706 C15orf62A8K5M9 175 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 BET1O15155 118 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 NUP62P37198 522 aaPredicted RBP6.48□□□□□ -1.37
USP28-205ENST00000537706 NUTF2P61970 127 aaKnown RBP6.48□□□□□ -1.37
USP28-205ENST00000537706 RAB32Q13637 225 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 TOR2AQ5JU69 321 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 GGNBP1Q5YKI7 109 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 TRPT1Q86TN4 253 aaKnown RBP6.48□□□□□ -1.37
USP28-205ENST00000537706 ZNF502Q8TBZ5 544 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 BSCL2Q96G97 398 aaPredicted RBP6.48□□□□□ -1.37
USP28-205ENST00000537706 RHPN1-AS1Q9BWJ2 59 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 ZNF471Q9BX82 626 aaPredicted RBP6.48□□□□□ -1.37
USP28-205ENST00000537706 SLC25A32Q9H2D1 315 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 OR5AC2Q9NZP5 309 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 PUS1Q9Y606 427 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP28-205ENST00000537706 IGHV7-4-1A0A0J9YVY3 117 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 MFSD2BA6NFX1 497 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 GPR31O00270 319 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 ZNF207O43670 478 aaKnown RBP6.48□□□□□ -1.37
USP28-205ENST00000537706 OXTP01178 125 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 CRYGCP07315 174 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 EMP1P54849 157 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 ERVFC1-1P60608 527 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 S100A10P60903 97 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 H1FOOQ8IZA3 346 aaPredicted RBP6.48□□□□□ -1.37
USP28-205ENST00000537706 PCNPQ8WW12 178 aaKnown RBP6.48□□□□□ -1.37
USP28-205ENST00000537706 RRNAD1Q96FB5 475 aaKnown RBP6.48□□□□□ -1.37
USP28-205ENST00000537706 CLEC5AQ9NY25 188 aa6.48□□□□□ -1.37
USP28-205ENST00000537706 TRAV2A0A0B4J234 112 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 C3orf85A0A1B0GTC6 90 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 DUXBA0A1W2PPF3 345 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 CHEK1O14757 476 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 PROP1O75360 226 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 CRYZL1O95825 349 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 TPT1P13693 172 aaKnown RBP6.47□□□□□ -1.37
USP28-205ENST00000537706 GNRHRP30968 328 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 MAS1LP35410 378 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 CLINT1Q14677 625 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 SMCO1Q147U7 214 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 C10orf55Q5SWW7 151 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 OR1S1Q8NH92 325 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 OR10J5Q8NHC4 309 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 VSTM2AQ8TAG5 236 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 GLYATL2Q8WU03 294 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 SECTM1Q8WVN6 248 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 SLC5A7Q9GZV3 580 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 TMEM222Q9H0R3 208 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 GSKIPQ9P0R6 139 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms