RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ZNF705AQ6ZN79 300 aaPredicted RBP13.18□□□□□ -0.3
SSSCA1-206ENST00000531405 PRR13Q9NZ81 148 aa13.18□□□□□ -0.3
SSSCA1-206ENST00000531405 HLA-DRB4X5D2U9 266 aa13.18□□□□□ -0.3
SSSCA1-206ENST00000531405 IGHV3OR16-12A0A075B7B8 117 aa13.17□□□□□ -0.3
SSSCA1-206ENST00000531405 CTF1Q16619 201 aa13.17□□□□□ -0.3
SSSCA1-206ENST00000531405 GPR107Q5VW38 600 aa13.17□□□□□ -0.3
SSSCA1-206ENST00000531405 ETFRF1Q6IPR1 90 aa13.17□□□□□ -0.3
SSSCA1-206ENST00000531405 MIXL1Q9H2W2 232 aa13.17□□□□□ -0.3
SSSCA1-206ENST00000531405 SEPSECSQ9HD40 501 aaKnown RBP13.17□□□□□ -0.3
SSSCA1-206ENST00000531405 CRYM-AS1A6NIL9 109 aa13.16□□□□□ -0.3
SSSCA1-206ENST00000531405 ZNF705FA8MVS1 300 aaPredicted RBP13.16□□□□□ -0.3
SSSCA1-206ENST00000531405 GABARAPH6UMI1 98 aa13.16□□□□□ -0.3
SSSCA1-206ENST00000531405 GSTZ1O43708 216 aaPredicted RBP13.16□□□□□ -0.3
SSSCA1-206ENST00000531405 GABARAPO95166 117 aa13.16□□□□□ -0.3
SSSCA1-206ENST00000531405 ZNF705DP0CH99 300 aaPredicted RBP13.16□□□□□ -0.3
SSSCA1-206ENST00000531405 ZNF705BP0CI00 300 aaPredicted RBP13.16□□□□□ -0.3
SSSCA1-206ENST00000531405 NKX2-1P43699 371 aaPredicted RBP13.16□□□□□ -0.3
SSSCA1-206ENST00000531405 RNF125Q96EQ8 232 aa13.16□□□□□ -0.3
SSSCA1-206ENST00000531405 PBDC1Q9BVG4 233 aa13.16□□□□□ -0.3
SSSCA1-206ENST00000531405 WDR12Q9GZL7 423 aaKnown RBP13.16□□□□□ -0.3
SSSCA1-206ENST00000531405 ABCA13Q86UQ4 5058 aa13.15□□□□□ -0.3
SSSCA1-206ENST00000531405 IGLV2-18A0A075B6J9 118 aa13.15□□□□□ -0.3
SSSCA1-206ENST00000531405 IFNA10P01566 189 aa13.15□□□□□ -0.3
SSSCA1-206ENST00000531405 SPART-AS1P0CW21 52 aa13.15□□□□□ -0.3
SSSCA1-206ENST00000531405 MED14OSP0DP75 135 aa13.15□□□□□ -0.3
SSSCA1-206ENST00000531405 NMSQ5H8A3 153 aa13.15□□□□□ -0.3
SSSCA1-206ENST00000531405 OR4C16Q8NGL9 310 aa13.15□□□□□ -0.3
SSSCA1-206ENST00000531405 C15orf40Q8WUR7 153 aa13.15□□□□□ -0.3
SSSCA1-206ENST00000531405 LINC00052Q96N35 136 aa13.15□□□□□ -0.3
SSSCA1-206ENST00000531405 NEU1Q99519 415 aa13.15□□□□□ -0.3
SSSCA1-206ENST00000531405 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.3
SSSCA1-206ENST00000531405 SULT1A3P0DMM9 295 aa13.14□□□□□ -0.31
SSSCA1-206ENST00000531405 SULT1A4P0DMN0 295 aa13.14□□□□□ -0.31
SSSCA1-206ENST00000531405 SURF2Q15527 256 aaPredicted RBP13.14□□□□□ -0.31
SSSCA1-206ENST00000531405 SAV1Q9H4B6 383 aaPredicted RBP13.14□□□□□ -0.31
SSSCA1-206ENST00000531405 GPR132Q9UNW8 380 aa13.14□□□□□ -0.31
SSSCA1-206ENST00000531405 TMEM56-RWDD3S4R434 201 aa13.14□□□□□ -0.31
SSSCA1-206ENST00000531405 DISC1C4P0D8 188 aa13.13□□□□□ -0.31
SSSCA1-206ENST00000531405 RGS5O15539 181 aa13.13□□□□□ -0.31
SSSCA1-206ENST00000531405 ZNF90Q03938 601 aa13.13□□□□□ -0.31
SSSCA1-206ENST00000531405 LGALS9BQ3B8N2 356 aa13.13□□□□□ -0.31
SSSCA1-206ENST00000531405 NOXA1Q86UR1 476 aa13.13□□□□□ -0.31
SSSCA1-206ENST00000531405 UBE2DNLQ8IWF7 75 aa13.13□□□□□ -0.31
SSSCA1-206ENST00000531405 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
SSSCA1-206ENST00000531405 SLC35B3Q9H1N7 401 aa13.13□□□□□ -0.31
SSSCA1-206ENST00000531405 TMEM189A5PLL7 270 aa13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 SMIM9A6NGZ8 99 aa13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 CTDSP2O14595 271 aa13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 SSBP1Q04837 148 aaKnown RBP13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 KLF9Q13886 244 aaPredicted RBP13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 FAM222AQ5U5X8 452 aa13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 LGI3Q8N145 548 aa13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 OR4B1Q8NGF8 309 aa13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 OR51S1Q8NGJ8 323 aa13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 DTD1Q8TEA8 209 aa13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 RBKSQ9H477 322 aa13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 DKK2Q9UBU2 259 aa13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 RFNGQ9Y644 331 aa13.12□□□□□ -0.31
SSSCA1-206ENST00000531405 IGKV1D-37A0A075B6S9 117 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 ZFP92A6NM28 416 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 F6UB75 175 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 SOCS3O14543 225 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 IFNA21P01568 189 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 AKAIN1P0CW23 69 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 HTN3P15516 51 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 FOXI2Q6ZQN5 318 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 COQ8AQ8NI60 647 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 SMIM4Q8WVI0 70 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 NIPSNAP3BQ9BS92 247 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 HSPB7Q9UBY9 170 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 U3KQ87 197 aa13.11□□□□□ -0.31
SSSCA1-206ENST00000531405 SMIM18P0DKX4 95 aa13.1□□□□□ -0.31
SSSCA1-206ENST00000531405 NUP62P37198 522 aaPredicted RBP13.1□□□□□ -0.31
SSSCA1-206ENST00000531405 ID1P41134 155 aa13.1□□□□□ -0.31
SSSCA1-206ENST00000531405 PSMB3P49720 205 aa13.1□□□□□ -0.31
SSSCA1-206ENST00000531405 LYZP61626 148 aa13.1□□□□□ -0.31
SSSCA1-206ENST00000531405 MRPS10P82664 201 aaKnown RBP13.1□□□□□ -0.31
SSSCA1-206ENST00000531405 GAMTQ14353 236 aa13.1□□□□□ -0.31
SSSCA1-206ENST00000531405 OR8G2PQ6IF36 304 aa13.1□□□□□ -0.31
SSSCA1-206ENST00000531405 Q6ZR54 194 aa13.1□□□□□ -0.31
SSSCA1-206ENST00000531405 LYZL2Q7Z4W2 148 aa13.1□□□□□ -0.31
SSSCA1-206ENST00000531405 IL22RA2Q969J5 263 aa13.1□□□□□ -0.31
SSSCA1-206ENST00000531405 SUPT4H1P63272 117 aaKnown RBP13.09□□□□□ -0.31
SSSCA1-206ENST00000531405 OR2F1Q13607 317 aa13.09□□□□□ -0.31
SSSCA1-206ENST00000531405 SMCO1Q147U7 214 aa13.09□□□□□ -0.31
SSSCA1-206ENST00000531405 ZNF79Q15937 498 aa13.09□□□□□ -0.31
SSSCA1-206ENST00000531405 CLVS1Q8IUQ0 354 aaPredicted RBP13.09□□□□□ -0.31
SSSCA1-206ENST00000531405 C1orf158Q8N1D5 194 aa13.09□□□□□ -0.31
SSSCA1-206ENST00000531405 PRRT1Q99946 306 aa13.09□□□□□ -0.31
SSSCA1-206ENST00000531405 HSPG2P98160 4391 aa13.08□□□□□ -0.32
SSSCA1-206ENST00000531405 CCR6P51684 374 aa13.08□□□□□ -0.32
SSSCA1-206ENST00000531405 IL18Q14116 193 aa13.08□□□□□ -0.32
SSSCA1-206ENST00000531405 FAM78BQ5VT40 261 aa13.08□□□□□ -0.32
SSSCA1-206ENST00000531405 SLC35E1Q96K37 410 aa13.08□□□□□ -0.32
SSSCA1-206ENST00000531405 CLUHP3Q96NS8 147 aa13.08□□□□□ -0.32
SSSCA1-206ENST00000531405 CACFD1Q9UGQ2 172 aa13.08□□□□□ -0.32
SSSCA1-206ENST00000531405 PFDN2Q9UHV9 154 aa13.08□□□□□ -0.32
SSSCA1-206ENST00000531405 KCNIP3Q9Y2W7 256 aa13.08□□□□□ -0.32
SSSCA1-206ENST00000531405 YTHDF2Q9Y5A9 579 aaKnown RBP13.08□□□□□ -0.32
SSSCA1-206ENST00000531405 A0A0B4J2A0 478 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms