RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 A0A087WW49 117 aa19.01■□□□□ 0.63
LDLRAD3-203ENST00000528989 RPL29P47914 159 aaKnown RBP19.01■□□□□ 0.63
LDLRAD3-203ENST00000528989 YPEL3P61236 119 aaPredicted RBP19.01■□□□□ 0.63
LDLRAD3-203ENST00000528989 IFITM2Q01629 132 aa19.01■□□□□ 0.63
LDLRAD3-203ENST00000528989 PUS1Q9Y606 427 aaKnown RBP eCLIP19.01■□□□□ 0.63
LDLRAD3-203ENST00000528989 NUDT19A8MXV4 375 aa19■□□□□ 0.63
LDLRAD3-203ENST00000528989 C17orf112F2Z3M2 114 aa19■□□□□ 0.63
LDLRAD3-203ENST00000528989 FAM74A1Q5RGS3 127 aa19■□□□□ 0.63
LDLRAD3-203ENST00000528989 SPSB3Q6PJ21 355 aa19■□□□□ 0.63
LDLRAD3-203ENST00000528989 TEX261Q6UWH6 196 aa19■□□□□ 0.63
LDLRAD3-203ENST00000528989 ATP6V0BQ99437 205 aa19■□□□□ 0.63
LDLRAD3-203ENST00000528989 SLC39A9Q9NUM3 307 aa19■□□□□ 0.63
LDLRAD3-203ENST00000528989 ADARB2-AS1A8MUL3 147 aa18.99■□□□□ 0.63
LDLRAD3-203ENST00000528989 YIF1AO95070 293 aa18.99■□□□□ 0.63
LDLRAD3-203ENST00000528989 FFAR4Q5NUL3 377 aa18.99■□□□□ 0.63
LDLRAD3-203ENST00000528989 RCC1LQ96I51 464 aaKnown RBP18.99■□□□□ 0.63
LDLRAD3-203ENST00000528989 PSMG3Q9BT73 122 aaPredicted RBP18.99■□□□□ 0.63
LDLRAD3-203ENST00000528989 DOK5Q9P104 306 aa18.99■□□□□ 0.63
LDLRAD3-203ENST00000528989 TIMM9Q9Y5J7 89 aa18.99■□□□□ 0.63
LDLRAD3-203ENST00000528989 TOMM40O96008 361 aa18.99■□□□□ 0.63
LDLRAD3-203ENST00000528989 SEC11BP0C7V7 166 aa18.99■□□□□ 0.63
LDLRAD3-203ENST00000528989 NSUN5P1Q3KNT7 163 aa18.99■□□□□ 0.63
LDLRAD3-203ENST00000528989 OR11H1Q8NG94 326 aa18.99■□□□□ 0.63
LDLRAD3-203ENST00000528989 TSPAN15O95858 294 aa18.98■□□□□ 0.63
LDLRAD3-203ENST00000528989 GGCTO75223 188 aaKnown RBP18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 IL4P05112 153 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 ORM2P19652 201 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 SELENOTP62341 195 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 TOMM20LQ6UXN7 152 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 UNQ9165/PRO28630Q6UXU0 137 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 OR51G1Q8NGK1 321 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 Q8WTZ3 238 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 HSPB1P04792 205 aaKnown RBP18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 FHITP49789 147 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 LYZP61626 148 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 FAM209BQ5JX69 171 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 ZNF600Q6ZNG1 722 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 ZNF680Q8NEM1 530 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 PBDC1Q9BVG4 233 aa18.97■□□□□ 0.63
LDLRAD3-203ENST00000528989 EIF3GO75821 320 aaKnown RBP eCLIP18.96■□□□□ 0.63
LDLRAD3-203ENST00000528989 RAB2AP61019 212 aa18.96■□□□□ 0.63
LDLRAD3-203ENST00000528989 SERF2P84101 59 aa18.96■□□□□ 0.63
LDLRAD3-203ENST00000528989 Q6ZRG5 221 aa18.96■□□□□ 0.63
LDLRAD3-203ENST00000528989 OR1B1Q8NGR6 318 aa18.96■□□□□ 0.63
LDLRAD3-203ENST00000528989 TMEM37Q8WXS4 190 aa18.96■□□□□ 0.63
LDLRAD3-203ENST00000528989 RAX2Q96IS3 184 aa18.96■□□□□ 0.63
LDLRAD3-203ENST00000528989 COL6A5A8TX70 2615 aa18.96■□□□□ 0.62
LDLRAD3-203ENST00000528989 SCGB2A1O75556 95 aa18.95■□□□□ 0.62
LDLRAD3-203ENST00000528989 RELQ04864 619 aaPredicted RBP18.95■□□□□ 0.62
LDLRAD3-203ENST00000528989 USF2Q15853 346 aaPredicted RBP18.95■□□□□ 0.62
LDLRAD3-203ENST00000528989 PATE2Q6UY27 113 aa18.95■□□□□ 0.62
LDLRAD3-203ENST00000528989 OR1N2Q8NGR9 330 aa18.95■□□□□ 0.62
LDLRAD3-203ENST00000528989 HOXD3P31249 432 aaPredicted RBP18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 RPEL1Q2QD12 228 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 TMEM158Q8WZ71 300 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 RNF125Q96EQ8 232 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 UHRF2Q96PU4 802 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 CITED1Q99966 193 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 ZFAND3Q9H8U3 227 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 RPRMQ9NS64 109 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 WI2-2373I1.2A0A1W2PRP0 233 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 FABP1P07148 127 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 SLURP1P55000 103 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 PHYHIPLQ96FC7 376 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 C20orf24Q9BUV8 137 aa18.94■□□□□ 0.62
LDLRAD3-203ENST00000528989 ZNF320A2RRD8 509 aa18.93■□□□□ 0.62
LDLRAD3-203ENST00000528989 ZNF207O43670 478 aaKnown RBP18.93■□□□□ 0.62
LDLRAD3-203ENST00000528989 OR5G3P0C626 314 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 AKR1C8PQ5T2L2 129 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 EIF5AL1Q6IS14 154 aaKnown RBP18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 RPP25LQ8N5L8 163 aaKnown RBP18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 SEPSECSQ9HD40 501 aaKnown RBP18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 KCNIP2Q9NS61 270 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 LINC01619G3V211 115 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 SYNJ2BPP57105 145 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 MORN5Q5VZ52 161 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 NDUFA11Q86Y39 141 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 OR10G4Q8NGN3 311 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 OR10G9Q8NGN4 311 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 OR10G7Q8NGN6 311 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 DPF1Q92782 380 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 DNAJC4Q9NNZ3 241 aa18.92■□□□□ 0.62
LDLRAD3-203ENST00000528989 CCL24O00175 119 aa18.91■□□□□ 0.62
LDLRAD3-203ENST00000528989 NDUFA4O00483 81 aa18.91■□□□□ 0.62
LDLRAD3-203ENST00000528989 M6PRP20645 277 aa18.91■□□□□ 0.62
LDLRAD3-203ENST00000528989 PLP1P60201 277 aa18.91■□□□□ 0.62
LDLRAD3-203ENST00000528989 PCNPQ8WW12 178 aaKnown RBP18.91■□□□□ 0.62
LDLRAD3-203ENST00000528989 WNK1Q9H4A3 2382 aa18.91■□□□□ 0.62
LDLRAD3-203ENST00000528989 HYPMO75409 117 aa18.9■□□□□ 0.62
LDLRAD3-203ENST00000528989 TMEM41BQ5BJD5 291 aa18.9■□□□□ 0.62
LDLRAD3-203ENST00000528989 GPHB5Q86YW7 130 aa18.9■□□□□ 0.62
LDLRAD3-203ENST00000528989 MRPL27Q9P0M9 148 aaKnown RBP18.9■□□□□ 0.62
LDLRAD3-203ENST00000528989 COX7A2P2O60397 106 aa18.9■□□□□ 0.62
LDLRAD3-203ENST00000528989 ACOT6Q3I5F7 207 aaPredicted RBP18.9■□□□□ 0.62
LDLRAD3-203ENST00000528989 SPATA31B1PQ5VZV4 182 aa18.9■□□□□ 0.62
LDLRAD3-203ENST00000528989 STAB1Q9NY15 2570 aa18.9■□□□□ 0.62
LDLRAD3-203ENST00000528989 HMGB3O15347 200 aaKnown RBP18.89■□□□□ 0.61
LDLRAD3-203ENST00000528989 EDN2P20800 178 aa18.89■□□□□ 0.61
LDLRAD3-203ENST00000528989 SULT1A2P50226 295 aa18.89■□□□□ 0.61
LDLRAD3-203ENST00000528989 KLF5Q13887 457 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms