RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 IGHV2-70DA0A0C4DH43 119 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 hDV102S1A0JD36 115 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 RNF222A6NCQ9 220 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 OR11H12B2RN74 326 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 H7C2Y5 167 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 K7EP13 123 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 ENSAO43768 121 aaKnown RBP3.32□□□□□ -1.88
CD44-226ENST00000527889 DEDDO75618 318 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 NDUFB8O95169 186 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 FGF2P09038 288 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 OR9G9P0C7N8 305 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 METTL15P1P0C7V9 234 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 P0C879 139 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 CT45A6P0DMU7 189 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 CT45A5P0DMU8 189 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 CT45A7P0DMV0 189 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 IAPPP10997 89 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 ZNF25P17030 456 aaPredicted RBP3.32□□□□□ -1.88
CD44-226ENST00000527889 VDAC1P21796 283 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 NKX2-1P43699 371 aaPredicted RBP3.32□□□□□ -1.88
CD44-226ENST00000527889 THBS3P49746 956 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 RANP62826 216 aaKnown RBP3.32□□□□□ -1.88
CD44-226ENST00000527889 ATP6V1FQ16864 119 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 ODF3L2Q3SX64 289 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 SPINK9Q5DT21 86 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 DNLZQ5SXM8 178 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 LDLRAD2Q5SZI1 272 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 HCP5Q6MZN7 132 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 ZNF833PQ6ZTB9 187 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 VMO1Q7Z5L0 202 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 VKORC1L1Q8N0U8 176 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 KCNRGQ8N5I3 272 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 LINC00311Q8N616 119 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 THAP8Q8NA92 274 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 DMBX1Q8NFW5 382 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 OR11H1Q8NG94 326 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 OR11H2Q8NH07 326 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 OR4S2Q8NH73 311 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 OR9G1Q8NH87 305 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 DDB2Q92466 427 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 LSM10Q969L4 123 aaKnown RBP3.32□□□□□ -1.88
CD44-226ENST00000527889 RAB39BQ96DA2 213 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 NARS2Q96I59 477 aaKnown RBP3.32□□□□□ -1.88
CD44-226ENST00000527889 S1PR3Q99500 378 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 NABP2Q9BQ15 211 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 CLEC7AQ9BXN2 247 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 QTRT1Q9BXR0 403 aaKnown RBP3.32□□□□□ -1.88
CD44-226ENST00000527889 ARL6Q9H0F7 186 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 Q9H8V8 135 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 TNFSF18Q9UNG2 199 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 WDR83OSQ9Y284 106 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 NSG2Q9Y328 171 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 HIVEP2P31629 2446 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 A0A1B0GU03 582 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 KANTRA0A1W2PQU2 76 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 IGSF23A1L1A6 192 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 FAM24AA6NFZ4 105 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 SRRM4A7MD48 611 aaKnown RBP3.31□□□□□ -1.88
CD44-226ENST00000527889 A8MXK9 166 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 PRSS46E5RG02 174 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 E5RGE8 158 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 H0YJW9 148 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 H3BP45 60 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 M0R1W7 72 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 BCL2L11O43521 198 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 CHST1O43916 411 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 GGCTO75223 188 aaKnown RBP3.31□□□□□ -1.88
CD44-226ENST00000527889 PITX3O75364 302 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 EIF3GO75821 320 aaKnown RBP eCLIP3.31□□□□□ -1.88
CD44-226ENST00000527889 TMEM50AO95807 157 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 HPRT1P00492 218 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 CFDP00746 253 aaPredicted RBP3.31□□□□□ -1.88
CD44-226ENST00000527889 IGLV1-47P01700 117 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 APOA2P02652 100 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 RBP4P02753 201 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 RLN2P04090 185 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 IGKV1-16P04430 117 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 ARG1P05089 322 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 GP9P14770 177 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 MYOD1P15172 320 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 RPL12P30050 165 aaKnown RBP3.31□□□□□ -1.88
CD44-226ENST00000527889 S100A11P31949 105 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 KIR2DS2P43631 304 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 ERVK-16P61578 105 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 PAX2Q02962 417 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 RTL8BQ17RB0 113 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 CLEC12BQ2HXU8 276 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 HLA-DRB5Q30154 266 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 SAMD13Q5VXD3 122 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 ZNF767PQ75MW2 155 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 MOB3BQ86TA1 216 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 GBGT1Q8N5D6 347 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 EIF4E3Q8N5X7 224 aaKnown RBP3.31□□□□□ -1.88
CD44-226ENST00000527889 TCTEX1D1Q8N7M0 179 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 MAPK1IP1LQ8NDC0 245 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 OR4P4Q8NGL7 312 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 OR52E5Q8NH55 327 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 PCNPQ8WW12 178 aaKnown RBP3.31□□□□□ -1.88
CD44-226ENST00000527889 C14orf144Q96I85 54 aa3.31□□□□□ -1.88
CD44-226ENST00000527889 ADTRPQ96IZ2 230 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms