RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 TRAM1Q15629 374 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 SPINK9Q5DT21 86 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 TTC32Q5I0X7 151 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 PIK3CD-AS1Q5SR53 167 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 C16orf54Q6UWD8 224 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 Q6ZRN7 208 aaPredicted RBP5.58□□□□□ -1.52
USP48-212ENST00000527823 CADM3Q8N126 398 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 C1orf158Q8N1D5 194 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 DHRSXQ8N5I4 330 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 NRACQ8N912 160 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 FXYD6Q9H0Q3 95 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 SLC35B3Q9H1N7 401 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 FNDC4Q9H6D8 234 aaPredicted RBP5.58□□□□□ -1.52
USP48-212ENST00000527823 TMEM50AO95807 157 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 IGKV1-17P01599 117 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 HBE1P02100 147 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 LPAR6P43657 344 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 CCL18P55774 89 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 KRTAP10-1P60331 282 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 SNRPD3P62318 126 aaKnown RBP5.57□□□□□ -1.52
USP48-212ENST00000527823 HAMPP81172 84 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 GSG1LQ6UXU4 331 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 SSX7Q7RTT5 188 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 HOGA1Q86XE5 327 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 LGALS14Q8TCE9 139 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 C17orf77Q96MU5 243 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 NRN1Q9NPD7 142 aa5.57□□□□□ -1.52
USP48-212ENST00000527823 RNF213Q63HN8 5207 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 TRAV1-2A0A0B4J238 106 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 PTGES3LE9PB15 166 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 PDCD5O14737 125 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 CLN5O75503 358 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 PGLYRP1O75594 196 aaPredicted RBP5.56□□□□□ -1.52
USP48-212ENST00000527823 IGKV1-39P01597 117 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 SMR3BP02814 79 aaPredicted RBP5.56□□□□□ -1.52
USP48-212ENST00000527823 IGKV1D-39P04432 117 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 RAB3BP20337 219 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 NKX2-1P43699 371 aaPredicted RBP5.56□□□□□ -1.52
USP48-212ENST00000527823 EIF2B2P49770 351 aaKnown RBP5.56□□□□□ -1.52
USP48-212ENST00000527823 LINC00315P59091 139 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 USF2Q15853 346 aaPredicted RBP5.56□□□□□ -1.52
USP48-212ENST00000527823 ZNF79Q15937 498 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 TIGITQ495A1 244 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 TPRA1Q86W33 373 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 PACRGLQ8N7B6 248 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 NARS2Q96I59 477 aaKnown RBP5.56□□□□□ -1.52
USP48-212ENST00000527823 SEC22AQ96IW7 307 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 TSC22D3Q99576 134 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 SAV1Q9H4B6 383 aaPredicted RBP5.56□□□□□ -1.52
USP48-212ENST00000527823 Q9H8V8 135 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 ACOT13Q9NPJ3 140 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 FKBP11Q9NYL4 201 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 GOLT1BQ9Y3E0 138 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 PKHD1L1Q86WI1 4243 aa5.56□□□□□ -1.52
USP48-212ENST00000527823 A0A0A0MQY5 61 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 PLAC8L1A1L4L8 177 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 F5H768 121 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 CASQ2O14958 399 aaPredicted RBP5.55□□□□□ -1.52
USP48-212ENST00000527823 PRM2P04554 102 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 RNASE2P10153 161 aaKnown RBP5.55□□□□□ -1.52
USP48-212ENST00000527823 MYL9P24844 172 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 RORCP51449 518 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 HERV-K104P61576 105 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 IZUMO4Q1ZYL8 232 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 RRN3P1Q2M238 152 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 SIGLEC15Q6ZMC9 328 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 FOXI2Q6ZQN5 318 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 OR4X1Q8NH49 305 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 MRGPRFQ96AM1 343 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 SLC25A38Q96DW6 304 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 UPK3BQ9BT76 320 aa5.55□□□□□ -1.52
USP48-212ENST00000527823 A0A1W2PPQ1 181 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 LYRM9A8MSI8 78 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 F6UB75 175 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 SOCS3O14543 225 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 SCGNO76038 276 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 IGLC1P0CG04 106 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 DNAH10OSP0CZ25 163 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 OPRK1P41145 380 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 HSPE1P61604 102 aaKnown RBP5.54□□□□□ -1.52
USP48-212ENST00000527823 TMEM69Q5SWH9 247 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 TSPAN14Q8NG11 270 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 TMEM230Q96A57 120 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 GPR146Q96CH1 333 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 MGLLQ99685 303 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 C7orf50Q9BRJ6 194 aaKnown RBP5.54□□□□□ -1.52
USP48-212ENST00000527823 CCDC90BQ9GZT6 254 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 RHBDL2Q9NX52 303 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 ZNF586Q9NXT0 402 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 EHFQ9NZC4 300 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 PTTG2Q9NZH5 202 aa5.54□□□□□ -1.52
USP48-212ENST00000527823 MEIS3P1A6NDR6 274 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 INS-IGF2F8WCM5 200 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 CORTO00230 105 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 BUB3O43684 328 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 IL4P05112 153 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 DEFB130BP0DP73 79 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 DEFB130AP0DP74 79 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 AP2S1P53680 142 aaPredicted RBP5.53□□□□□ -1.52
USP48-212ENST00000527823 PAX9P55771 341 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms