RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 MS4A6AQ9H2W1 248 aa13□□□□□ -0.33
NR1H3-228ENST00000525441 ZFP92A6NM28 416 aa12.99□□□□□ -0.33
NR1H3-228ENST00000525441 INMT-MINDY4F8WBC2 141 aa12.99□□□□□ -0.33
NR1H3-228ENST00000525441 WRBO00258 174 aa12.99□□□□□ -0.33
NR1H3-228ENST00000525441 ADAP1O75689 374 aa12.99□□□□□ -0.33
NR1H3-228ENST00000525441 GAMTQ14353 236 aa12.99□□□□□ -0.33
NR1H3-228ENST00000525441 STPG3Q8N7X2 389 aa12.99□□□□□ -0.33
NR1H3-228ENST00000525441 MAP6D1Q9H9H5 199 aa12.99□□□□□ -0.33
NR1H3-228ENST00000525441 RABAC1Q9UI14 185 aa12.99□□□□□ -0.33
NR1H3-228ENST00000525441 HELTA6NFD8 242 aa12.98□□□□□ -0.33
NR1H3-228ENST00000525441 IL5P05113 134 aa12.98□□□□□ -0.33
NR1H3-228ENST00000525441 CASC10Q5T4H9 136 aa12.98□□□□□ -0.33
NR1H3-228ENST00000525441 Q6ZWC4 215 aa12.98□□□□□ -0.33
NR1H3-228ENST00000525441 APRG1Q8IVJ8 170 aa12.98□□□□□ -0.33
NR1H3-228ENST00000525441 STXBP6Q8NFX7 210 aa12.98□□□□□ -0.33
NR1H3-228ENST00000525441 OR51G1Q8NGK1 321 aa12.98□□□□□ -0.33
NR1H3-228ENST00000525441 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
NR1H3-228ENST00000525441 U3KQE9 123 aa12.98□□□□□ -0.33
NR1H3-228ENST00000525441 PSG1P11464 419 aa12.97□□□□□ -0.33
NR1H3-228ENST00000525441 RPL35AP18077 110 aaKnown RBP12.97□□□□□ -0.33
NR1H3-228ENST00000525441 NUP62P37198 522 aaPredicted RBP12.97□□□□□ -0.33
NR1H3-228ENST00000525441 NKX2-1P43699 371 aaPredicted RBP12.97□□□□□ -0.33
NR1H3-228ENST00000525441 AP2S1P53680 142 aaPredicted RBP12.97□□□□□ -0.33
NR1H3-228ENST00000525441 USF2Q15853 346 aaPredicted RBP12.97□□□□□ -0.33
NR1H3-228ENST00000525441 IL17DQ8TAD2 202 aa12.97□□□□□ -0.33
NR1H3-228ENST00000525441 TP53TG1Q9Y2A0 90 aa12.97□□□□□ -0.33
NR1H3-228ENST00000525441 STRAPQ9Y3F4 350 aaKnown RBP12.97□□□□□ -0.33
NR1H3-228ENST00000525441 PRAF2O60831 178 aa12.96□□□□□ -0.33
NR1H3-228ENST00000525441 ID3Q02535 119 aa12.96□□□□□ -0.33
NR1H3-228ENST00000525441 SPANXN5Q5MJ07 72 aa12.96□□□□□ -0.33
NR1H3-228ENST00000525441 C16orf54Q6UWD8 224 aa12.96□□□□□ -0.33
NR1H3-228ENST00000525441 MITD1Q8WV92 249 aa12.96□□□□□ -0.33
NR1H3-228ENST00000525441 RNF125Q96EQ8 232 aa12.96□□□□□ -0.33
NR1H3-228ENST00000525441 OVOL2Q9BRP0 275 aa12.96□□□□□ -0.33
NR1H3-228ENST00000525441 SPRY2O43597 315 aa12.95□□□□□ -0.34
NR1H3-228ENST00000525441 DEFB131AP59861 70 aa12.95□□□□□ -0.34
NR1H3-228ENST00000525441 OR8G2PQ6IF36 304 aa12.95□□□□□ -0.34
NR1H3-228ENST00000525441 OR4D5Q8NGN0 318 aa12.95□□□□□ -0.34
NR1H3-228ENST00000525441 GLMPQ8WWB7 406 aa12.95□□□□□ -0.34
NR1H3-228ENST00000525441 TRGV9Q99603 122 aa12.95□□□□□ -0.34
NR1H3-228ENST00000525441 IGKV1D-37A0A075B6S9 117 aa12.94□□□□□ -0.34
NR1H3-228ENST00000525441 MPTX1A8MV57 137 aa12.94□□□□□ -0.34
NR1H3-228ENST00000525441 SNRPGP15A8MWD9 76 aa12.94□□□□□ -0.34
NR1H3-228ENST00000525441 K7EQG2 157 aa12.94□□□□□ -0.34
NR1H3-228ENST00000525441 POLR2GP62487 172 aaKnown RBP eCLIP12.94□□□□□ -0.34
NR1H3-228ENST00000525441 ZNF124Q15973 351 aa12.94□□□□□ -0.34
NR1H3-228ENST00000525441 IAH1Q2TAA2 248 aaPredicted RBP12.94□□□□□ -0.34
NR1H3-228ENST00000525441 DEFB135Q30KP9 77 aa12.94□□□□□ -0.34
NR1H3-228ENST00000525441 ZFAND6Q6FIF0 208 aa12.94□□□□□ -0.34
NR1H3-228ENST00000525441 SEC22CQ9BRL7 303 aa12.94□□□□□ -0.34
NR1H3-228ENST00000525441 PBDC1Q9BVG4 233 aa12.94□□□□□ -0.34
NR1H3-228ENST00000525441 CSTL1Q9H114 145 aa12.94□□□□□ -0.34
NR1H3-228ENST00000525441 PSENENQ9NZ42 101 aa12.94□□□□□ -0.34
NR1H3-228ENST00000525441 H3BP45 60 aa12.93□□□□□ -0.34
NR1H3-228ENST00000525441 BUB3O43684 328 aa12.93□□□□□ -0.34
NR1H3-228ENST00000525441 SSSCA1O60232 199 aa12.93□□□□□ -0.34
NR1H3-228ENST00000525441 CFDP00746 253 aaPredicted RBP12.93□□□□□ -0.34
NR1H3-228ENST00000525441 ZNF90Q03938 601 aa12.93□□□□□ -0.34
NR1H3-228ENST00000525441 THAP8Q8NA92 274 aa12.93□□□□□ -0.34
NR1H3-228ENST00000525441 ZNF431Q8TF32 576 aaPredicted RBP12.93□□□□□ -0.34
NR1H3-228ENST00000525441 GPN1Q9HCN4 374 aaPredicted RBP12.93□□□□□ -0.34
NR1H3-228ENST00000525441 C7orf66A4D0T2 115 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 PRSS46E5RG02 174 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 SCGB1D2O95969 90 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 LYZP61626 148 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 AKR1C1Q04828 323 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 LEMD1Q68G75 181 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 SIGLEC15Q6ZMC9 328 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 FAM24BQ8N5W8 94 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 ZBTB8BQ8NAP8 495 aaPredicted RBP12.92□□□□□ -0.34
NR1H3-228ENST00000525441 DCANP1Q8TF63 244 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 RNF183Q96D59 192 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 SMIM8Q96KF7 97 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 RAB40CQ96S21 281 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 GSKIPQ9P0R6 139 aa12.92□□□□□ -0.34
NR1H3-228ENST00000525441 DNAH7Q8WXX0 4024 aa12.91□□□□□ -0.34
NR1H3-228ENST00000525441 ZNF688P0C7X2 276 aa12.91□□□□□ -0.34
NR1H3-228ENST00000525441 OR2F1Q13607 317 aa12.91□□□□□ -0.34
NR1H3-228ENST00000525441 STHQ8IWL8 128 aa12.91□□□□□ -0.34
NR1H3-228ENST00000525441 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
NR1H3-228ENST00000525441 NRN1Q9NPD7 142 aa12.91□□□□□ -0.34
NR1H3-228ENST00000525441 KMT2CQ8NEZ4 4911 aaKnown RBP12.9□□□□□ -0.34
NR1H3-228ENST00000525441 TAS2R30P59541 319 aa12.9□□□□□ -0.34
NR1H3-228ENST00000525441 SNRPD3P62318 126 aaKnown RBP12.9□□□□□ -0.34
NR1H3-228ENST00000525441 C1orf194Q5T5A4 169 aa12.9□□□□□ -0.34
NR1H3-228ENST00000525441 ACOT7LQ6ZUV0 252 aa12.9□□□□□ -0.34
NR1H3-228ENST00000525441 SEPSECSQ9HD40 501 aaKnown RBP12.9□□□□□ -0.34
NR1H3-228ENST00000525441 FBXL17Q9UF56 701 aa12.9□□□□□ -0.34
NR1H3-228ENST00000525441 IGKV1OR2-108A0A075B7D4 117 aa12.89□□□□□ -0.35
NR1H3-228ENST00000525441 SMCO3A2RU48 225 aa12.89□□□□□ -0.35
NR1H3-228ENST00000525441 S100A7P31151 101 aa12.89□□□□□ -0.35
NR1H3-228ENST00000525441 Q6ZNX1 250 aa12.89□□□□□ -0.35
NR1H3-228ENST00000525441 TMEM144Q7Z5S9 345 aa12.89□□□□□ -0.35
NR1H3-228ENST00000525441 C12orf45Q8N5I9 185 aaPredicted RBP12.89□□□□□ -0.35
NR1H3-228ENST00000525441 BPIFCQ8NFQ6 507 aa12.89□□□□□ -0.35
NR1H3-228ENST00000525441 GATAD1Q8WUU5 269 aa12.89□□□□□ -0.35
NR1H3-228ENST00000525441 ALG5Q9Y673 324 aa12.89□□□□□ -0.35
NR1H3-228ENST00000525441 FAM25EA8MYX2 175 aa12.88□□□□□ -0.35
NR1H3-228ENST00000525441 TSC22D2O75157 780 aa12.88□□□□□ -0.35
NR1H3-228ENST00000525441 CA1P00915 261 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms