RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 C2orf50Q96LR7 162 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 SPAG8Q99932 426 aaPredicted RBP9.46□□□□□ -0.9
VEGFA-225ENST00000523950 PSENENQ9NZ42 101 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 A0A0D9SG52 128 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 A0A1W2PS18 150 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 FAM25EA8MYX2 175 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 PRSS46E5RG02 174 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 CCSO14618 274 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 CHEK1O14757 476 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 TSPAN4O14817 238 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 SCAF4O95104 1147 aaKnown RBP9.45□□□□□ -0.9
VEGFA-225ENST00000523950 TOMM40O96008 361 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 S100A11P31949 105 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 GAMTQ14353 236 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 ZNF345Q14585 488 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 GUCA2BQ16661 112 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 WDR89Q96FK6 387 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-225ENST00000523950 NARS2Q96I59 477 aaKnown RBP9.45□□□□□ -0.9
VEGFA-225ENST00000523950 METTL26Q96S19 204 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 RHPN1-AS1Q9BWJ2 59 aa9.45□□□□□ -0.9
VEGFA-225ENST00000523950 RCL1Q9Y2P8 373 aaKnown RBP9.45□□□□□ -0.9
VEGFA-225ENST00000523950 IGHV3OR16-8A0A075B7F1 116 aa9.44□□□□□ -0.9
VEGFA-225ENST00000523950 ZFP92A6NM28 416 aa9.44□□□□□ -0.9
VEGFA-225ENST00000523950 FNDC10F2Z333 226 aa9.44□□□□□ -0.9
VEGFA-225ENST00000523950 H3BP45 60 aa9.44□□□□□ -0.9
VEGFA-225ENST00000523950 ZNF207O43670 478 aaKnown RBP9.44□□□□□ -0.9
VEGFA-225ENST00000523950 MBPP02686 304 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-225ENST00000523950 PVALBP20472 110 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-225ENST00000523950 NPPCP23582 126 aa9.44□□□□□ -0.9
VEGFA-225ENST00000523950 CD81P60033 236 aa9.44□□□□□ -0.9
VEGFA-225ENST00000523950 CYCSP99999 105 aaKnown RBP9.44□□□□□ -0.9
VEGFA-225ENST00000523950 TMEM14EPQ6UXP3 125 aa9.44□□□□□ -0.9
VEGFA-225ENST00000523950 THAP8Q8NA92 274 aa9.44□□□□□ -0.9
VEGFA-225ENST00000523950 VSIRQ9H7M9 311 aa9.44□□□□□ -0.9
VEGFA-225ENST00000523950 CFDP00746 253 aaPredicted RBP9.43□□□□□ -0.9
VEGFA-225ENST00000523950 NHLRC4P0CG21 123 aaPredicted RBP9.43□□□□□ -0.9
VEGFA-225ENST00000523950 RD3LP0DJH9 198 aa9.43□□□□□ -0.9
VEGFA-225ENST00000523950 CRYBB3P26998 211 aa9.43□□□□□ -0.9
VEGFA-225ENST00000523950 NUP62P37198 522 aaPredicted RBP9.43□□□□□ -0.9
VEGFA-225ENST00000523950 PAX9P55771 341 aa9.43□□□□□ -0.9
VEGFA-225ENST00000523950 VAMP2P63027 116 aa9.43□□□□□ -0.9
VEGFA-225ENST00000523950 OR2F1Q13607 317 aa9.43□□□□□ -0.9
VEGFA-225ENST00000523950 SLC51BQ86UW2 128 aa9.43□□□□□ -0.9
VEGFA-225ENST00000523950 OR51G1Q8NGK1 321 aa9.43□□□□□ -0.9
VEGFA-225ENST00000523950 PHYHIPLQ96FC7 376 aa9.43□□□□□ -0.9
VEGFA-225ENST00000523950 TRGV9Q99603 122 aa9.43□□□□□ -0.9
VEGFA-225ENST00000523950 IGKV1D-37A0A075B6S9 117 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 OR4C46A6NHA9 309 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 PMS2P5A8MQ11 134 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 K7EPK0 472 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 MPC2O95563 127 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 IL4P05112 153 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 IGHV4-30-4P0DP06 118 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 PSG1P11464 419 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 DLK1P80370 383 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 IL15RAQ13261 267 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 FAM90A2PQ658T7 463 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 ACOT7LQ6ZUV0 252 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 OR10P1Q8NGE3 313 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 GRAMD2BQ96HH9 432 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 CITED4Q96RK1 184 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 RNF2Q99496 336 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 FAM110AQ9BQ89 295 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 GGACTQ9BVM4 153 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 C19orf73Q9NVV2 129 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 PFDN2Q9UHV9 154 aa9.42□□□□□ -0.9
VEGFA-225ENST00000523950 LSM5Q9Y4Y9 91 aaKnown RBP9.42□□□□□ -0.9
VEGFA-225ENST00000523950 TRAV2A0A0B4J234 112 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 GOSR2O14653 212 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 CD7P09564 240 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 FRMD6-AS1P0C7T7 363 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 METTL15P1P0C7V9 234 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 CMC4P56277 68 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-225ENST00000523950 PAFAH1B2P68402 229 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 AKR1C1Q04828 323 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 OR8G2PQ6IF36 304 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 TMUB2Q71RG4 321 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 TMEM144Q7Z5S9 345 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 EIF4E3Q8N5X7 224 aaKnown RBP9.41□□□□□ -0.9
VEGFA-225ENST00000523950 LRRC20Q8TCA0 184 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 ST8SIA2Q92186 375 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 RNF125Q96EQ8 232 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 NMES1Q9C002 83 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 SLC25A32Q9H2D1 315 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 C11orf1Q9H5F2 150 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 RABAC1Q9UI14 185 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 U3KQE9 123 aa9.41□□□□□ -0.9
VEGFA-225ENST00000523950 IGHV3-49A0A0A0MS15 119 aa9.4□□□□□ -0.9
VEGFA-225ENST00000523950 OR11H12B2RN74 326 aa9.4□□□□□ -0.9
VEGFA-225ENST00000523950 KRBOX1C9JBD0 128 aa9.4□□□□□ -0.9
VEGFA-225ENST00000523950 CXCL2P19875 107 aa9.4□□□□□ -0.9
VEGFA-225ENST00000523950 H2BFSP57053 126 aa9.4□□□□□ -0.9
VEGFA-225ENST00000523950 USF2Q15853 346 aaPredicted RBP9.4□□□□□ -0.9
VEGFA-225ENST00000523950 TCF24Q7RTU0 167 aa9.4□□□□□ -0.9
VEGFA-225ENST00000523950 COMMD7Q86VX2 200 aa9.4□□□□□ -0.9
VEGFA-225ENST00000523950 MFFQ9GZY8 342 aa9.4□□□□□ -0.9
VEGFA-225ENST00000523950 TUBA4BQ9H853 241 aa9.4□□□□□ -0.9
VEGFA-225ENST00000523950 NPVFQ9HCQ7 196 aa9.4□□□□□ -0.9
VEGFA-225ENST00000523950 IGKV1OR2-108A0A075B7D4 117 aa9.39□□□□□ -0.91
VEGFA-225ENST00000523950 HELTA6NFD8 242 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms