RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 PP6455Q8WZ26 134 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 IL22RA2Q969J5 263 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM54Q969K7 222 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 BTF3L4Q96K17 158 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 SFXN3Q9BWM7 321 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 NAA60Q9H7X0 242 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 PLEKHF2Q9H8W4 249 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 WDR54Q9H977 334 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 IL36GQ9NZH8 169 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 NPIPA1Q9UND3 350 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 TBL2Q9Y4P3 447 aaKnown RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 RBM7Q9Y580 266 aaKnown RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR51B2Q9Y5P1 312 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 LHFPL6Q9Y693 200 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 NCKAP5O14513 1909 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 LRP4O75096 1905 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 CHD9Q3L8U1 2897 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 PRRC2AP48634 2157 aaKnown RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 TNRC6AQ8NDV7 1962 aaKnown RBP2.21□□□□□ -2.05
HMGB1P41-201ENST00000520234 MYO7AQ13402 2215 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 TRBV20OR9-2A0A075B6H5 130 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 ODAMA1E959 279 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 PINLYPA6NC86 204 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 FAM24AA6NFZ4 105 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR2T8A6NH00 312 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 C2orf70A6NJV1 201 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF705FA8MVS1 300 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 C17orf112F2Z3M2 114 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 KLRC4-KLRK1H3BQV0 150 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 SIRPB1O00241 398 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 TRAPPC6AO75865 159 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 CA2P00918 260 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 IGKV1D-33P01593 117 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 IGKV1-33P01594 117 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF705DP0CH99 300 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF705BP0CI00 300 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 STAG3L3P0CL85 134 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 CRYGSP22914 178 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 RBMXP38159 391 aaKnown RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 GUCA1AP43080 201 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 HINT1P49773 126 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF83P51522 516 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 DYNLT3P51808 116 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 CRYBA4P53673 196 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 DSCR4P56555 118 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 CCL7P80098 99 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 SERF2P84101 59 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 RUNX1Q01196 453 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 FMODQ06828 376 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 KISS1Q15726 138 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 BATFQ16520 125 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 DEFB133Q30KQ1 61 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 AMMECR1LQ6DCA0 310 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 Q6ZN92 141 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 Q6ZS52 159 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 C2orf91Q6ZV80 131 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 SPATA12Q7Z6I5 190 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 LRP11Q86VZ4 500 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 RPP25LQ8N5L8 163 aaKnown RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF709Q8N972 641 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR10W1Q8NGF6 305 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR8B12Q8NGG6 310 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR8B3Q8NGG8 313 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR5C1Q8NGR4 320 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR5H2Q8NGV7 314 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR11L1Q8NGX0 322 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 C7orf33Q8WU49 177 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 RLN3Q8WXF3 142 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 PSMF1Q92530 271 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 ARHGAP5-AS1Q96IT6 56 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR8B2Q96RD0 313 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 SIGMAR1Q99720 223 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 ATP5SQ99766 215 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 SMIM7Q9BQ49 75 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 PECRQ9BY49 303 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 COMMD5Q9GZQ3 224 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR51I2Q9H344 312 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 VSIRQ9H7M9 311 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 PROK2Q9HC23 129 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 NPVFQ9HCQ7 196 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 MED29Q9NX70 200 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 NXT1Q9UKK6 140 aaKnown RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 MCTS1Q9ULC4 181 aaKnown RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 LSM5Q9Y4Y9 91 aaKnown RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 TIMM9Q9Y5J7 89 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 CHCHD2Q9Y6H1 151 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 U3KQA8 63 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 HEATR1Q9H583 2144 aaKnown RBP2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 DYSFO75923 2080 aa2.21□□□□□ -2.06
HMGB1P41-201ENST00000520234 BRWD1Q9NSI6 2320 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TRANK1O15050 2925 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 F5P12259 2224 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TRBV6-6A0A0A6YYG2 114 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TRBV9A0A0B4J1U6 114 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 PIGBOS1A0A0B4J2F0 54 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 MUC21A0A0G2JKD1 596 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 IGHV5-10-1A0A0J9YXX1 117 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 MUC21A0A140T8X8 626 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 A0A1B0GV50 99 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 GRIFINA4D1Z8 144 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms