RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 IL17RELQ6ZVW7 336 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 KIR2DL5AQ8N109 375 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 KIR2DL5BQ8NHK3 375 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 ST8SIA2Q92186 375 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 SLC35E1Q96K37 410 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 C2orf50Q96LR7 162 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 ODF3Q96PU9 254 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 LINC00467Q9BRT7 94 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 TCEAL7Q9BRU2 100 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 PDCD10Q9BUL8 212 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 FBXL15Q9H469 300 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 ENY2Q9NPA8 101 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 C19orf73Q9NVV2 129 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 ARL2-SNX15V9GYD0 113 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 NCBP2LA6PVI3 153 aaKnown RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 H3BSH0 61 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 K7EIM0 57 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 RGS5O15539 181 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 TGOLN2O43493 480 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 OR4E1P0C645 316 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 TGFBR1P36897 503 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 INPP1P49441 399 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 EIF2B2P49770 351 aaKnown RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 AP2S1P53680 142 aaPredicted RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 HOXA4Q00056 320 aaPredicted RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 NDPQ00604 133 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 HES1Q14469 280 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 KRTAP20-1Q3LI63 56 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 CD300EQ496F6 205 aaPredicted RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 UTF1Q5T230 341 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 IL34Q6ZMJ4 242 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 ERASQ7Z444 233 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 SNX29P2Q8IUI4 249 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 SLC35G3Q8N808 338 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 MARCH1Q8TCQ1 289 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 C22orf15Q8WYQ4 148 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 PINX1Q96BK5 328 aaKnown RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 GPR146Q96CH1 333 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 TP53RKQ96S44 253 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 SPAG8Q99932 426 aaPredicted RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 VCX2Q9H322 139 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 LSM4Q9Y4Z0 139 aaKnown RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 MYCBP2O75592 4640 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 A0A0A0MQY5 61 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 A0A1B0GW64 132 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 PMS2P5A8MQ11 134 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 OVOL1O14753 267 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 PLA2G1BP04054 148 aaKnown RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 CSN3P07498 182 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 CD28P10747 220 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 CRYBB3P26998 211 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 LSM3P62310 102 aaKnown RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 TMEM144Q7Z5S9 345 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 NUDT10Q8NFP7 164 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 OR52B4Q8NGK2 314 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 LINC00476Q8WZB0 136 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 NUDT11Q96G61 164 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 ZNF414Q96IQ9 312 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 C20orf144Q9BQM9 153 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 GINS3Q9BRX5 216 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 SLC25A31Q9H0C2 315 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 C20orf85Q9H1P6 137 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 UBQLN2Q9UHD9 624 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 ELF5Q9UKW6 265 aaPredicted RBP2.16□□□□□ -2.06
MCF2-208ENST00000519895 PRELID1Q9Y255 219 aa2.16□□□□□ -2.06
MCF2-208ENST00000519895 A0A1W2PPQ1 181 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 HELTA6NFD8 242 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 TMEM50AO95807 157 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 S100A9P06702 114 aaKnown RBP2.15□□□□□ -2.07
MCF2-208ENST00000519895 NMBP08949 121 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 OR5AC1P0C628 307 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 PVALBP20472 110 aaPredicted RBP2.15□□□□□ -2.07
MCF2-208ENST00000519895 B2MP61769 119 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 PLGLAQ15195 96 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 TNXAQ16473 311 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 LY6EQ16553 131 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 GUK1Q16774 197 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 ZNF57Q68EA5 555 aaPredicted RBP2.15□□□□□ -2.07
MCF2-208ENST00000519895 MORN3Q6PF18 240 aaPredicted RBP2.15□□□□□ -2.07
MCF2-208ENST00000519895 ACOT7LQ6ZUV0 252 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 C12orf45Q8N5I9 185 aaPredicted RBP2.15□□□□□ -2.07
MCF2-208ENST00000519895 LINC00469Q8N7U9 141 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 DMBX1Q8NFW5 382 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 OR9G4Q8NGQ1 327 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 OR2G3Q8NGZ4 309 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 RITA1Q96K30 269 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 NDUFAF3Q9BU61 184 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 PARP11Q9NR21 331 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 C21orf62Q9NYP8 219 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 TMEM14CQ9P0S9 112 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 FBXO7Q9Y3I1 522 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 PKHD1L1Q86WI1 4243 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 TRAV39A0A0B4J263 110 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 TEX48A0A1B0GUV7 120 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 BMPR1BO00238 502 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 TAAR5O14804 337 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 SYNGR2O43760 224 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 CNIH1O95406 144 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 TRGV3P03979 118 aa2.15□□□□□ -2.07
MCF2-208ENST00000519895 GIPP09681 153 aaPredicted RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms