RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 OR10X1Q8NGY0 326 aa14.75□□□□□ -0.05
SDC2-202ENST00000518385 C1RLQ9NZP8 487 aa14.75□□□□□ -0.05
SDC2-202ENST00000518385 CHD6Q8TD26 2715 aa14.75□□□□□ -0.05
SDC2-202ENST00000518385 DOCK11Q5JSL3 2073 aa14.74□□□□□ -0.05
SDC2-202ENST00000518385 TRAV3A0A0B4J244 114 aa14.74□□□□□ -0.05
SDC2-202ENST00000518385 IGHV1-8P0DP01 117 aa14.74□□□□□ -0.05
SDC2-202ENST00000518385 PLA2G2AP14555 144 aa14.74□□□□□ -0.05
SDC2-202ENST00000518385 TXN2Q99757 166 aa14.74□□□□□ -0.05
SDC2-202ENST00000518385 SLC25A33Q9BSK2 321 aa14.74□□□□□ -0.05
SDC2-202ENST00000518385 FOXH1O75593 365 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 IGLV2-8P01709 118 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 OR5I1Q13606 314 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 TMEM177Q53S58 311 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 STXBP6Q8NFX7 210 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 OR8B3Q8NGG8 313 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 OR4A5Q8NH83 315 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 OR8B2Q96RD0 313 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 TMEM133Q9H2Q1 129 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 LAMTOR2Q9Y2Q5 125 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 OR7C2O60412 319 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 USF1P22415 310 aaPredicted RBP14.73□□□□□ -0.05
SDC2-202ENST00000518385 SRIP30626 198 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 MC5RP33032 325 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 CD69Q07108 199 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 PDPNQ86YL7 162 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 ST6GALNAC6Q969X2 333 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 MBD6Q96DN6 1003 aa14.73□□□□□ -0.05
SDC2-202ENST00000518385 A0A1W2PN81 502 aa14.72□□□□□ -0.05
SDC2-202ENST00000518385 J3QKU1 62 aa14.72□□□□□ -0.05
SDC2-202ENST00000518385 HYPMO75409 117 aa14.72□□□□□ -0.05
SDC2-202ENST00000518385 C3orf79P0CE67 100 aa14.72□□□□□ -0.05
SDC2-202ENST00000518385 BPIFB3P59826 476 aa14.72□□□□□ -0.05
SDC2-202ENST00000518385 TDRG1Q3Y452 100 aa14.72□□□□□ -0.05
SDC2-202ENST00000518385 NIT1Q86X76 327 aa14.72□□□□□ -0.05
SDC2-202ENST00000518385 VKORC1L1Q8N0U8 176 aa14.72□□□□□ -0.05
SDC2-202ENST00000518385 C11orf42Q8N5U0 333 aa14.72□□□□□ -0.05
SDC2-202ENST00000518385 TSKUQ8WUA8 353 aa14.72□□□□□ -0.05
SDC2-202ENST00000518385 SPTAN1Q13813 2472 aaKnown RBP14.72□□□□□ -0.05
SDC2-202ENST00000518385 GGTLC3B5MD39 225 aa14.71□□□□□ -0.05
SDC2-202ENST00000518385 H0YJW9 148 aa14.71□□□□□ -0.05
SDC2-202ENST00000518385 NPSP0C0P6 89 aa14.71□□□□□ -0.05
SDC2-202ENST00000518385 HIST1H1EP10412 219 aaKnown RBP14.71□□□□□ -0.05
SDC2-202ENST00000518385 CT83Q5H943 113 aa14.71□□□□□ -0.05
SDC2-202ENST00000518385 Q6ZN92 141 aa14.71□□□□□ -0.05
SDC2-202ENST00000518385 OR4C13Q8NGP0 309 aa14.71□□□□□ -0.05
SDC2-202ENST00000518385 VSTM2AQ8TAG5 236 aa14.71□□□□□ -0.05
SDC2-202ENST00000518385 ZNF503Q96F45 646 aa14.71□□□□□ -0.05
SDC2-202ENST00000518385 MRPL20Q9BYC9 149 aaKnown RBP14.71□□□□□ -0.05
SDC2-202ENST00000518385 HRNRQ86YZ3 2850 aaPredicted RBP14.7□□□□□ -0.06
SDC2-202ENST00000518385 TRAV9-2A0A087WT02 112 aa14.7□□□□□ -0.06
SDC2-202ENST00000518385 LYNX1G3V0Z9 82 aa14.7□□□□□ -0.06
SDC2-202ENST00000518385 LYNX1P0DP58 116 aa14.7□□□□□ -0.06
SDC2-202ENST00000518385 ERHP84090 104 aaKnown RBP14.7□□□□□ -0.06
SDC2-202ENST00000518385 LY6G5BQ8NDX9 201 aa14.7□□□□□ -0.06
SDC2-202ENST00000518385 C18orf32Q8TCD1 76 aa14.7□□□□□ -0.06
SDC2-202ENST00000518385 FLYWCH2Q96CP2 140 aaKnown RBP14.7□□□□□ -0.06
SDC2-202ENST00000518385 FAM103A1Q9BTL3 118 aaKnown RBP14.7□□□□□ -0.06
SDC2-202ENST00000518385 DNAJC4Q9NNZ3 241 aa14.7□□□□□ -0.06
SDC2-202ENST00000518385 F2Z2F3 143 aa14.69□□□□□ -0.06
SDC2-202ENST00000518385 TOMM40O96008 361 aa14.69□□□□□ -0.06
SDC2-202ENST00000518385 RNASE2P10153 161 aaKnown RBP14.69□□□□□ -0.06
SDC2-202ENST00000518385 COX6B1P14854 86 aa14.69□□□□□ -0.06
SDC2-202ENST00000518385 PMCHP20382 165 aa14.69□□□□□ -0.06
SDC2-202ENST00000518385 REG1BP48304 166 aa14.69□□□□□ -0.06
SDC2-202ENST00000518385 SUB1P53999 127 aaKnown RBP eCLIP14.69□□□□□ -0.06
SDC2-202ENST00000518385 RNASE7Q9H1E1 156 aaKnown RBP14.69□□□□□ -0.06
SDC2-202ENST00000518385 WASHC3Q9Y3C0 194 aa14.69□□□□□ -0.06
SDC2-202ENST00000518385 IGHV2-26A0A0B4J1V2 119 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 PPIAL4CA0A0B4J2A2 164 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 A1L4Q6 167 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 OVOL3O00110 214 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 HSBP1O75506 76 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 ACTL6BO94805 426 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 PPIAL4GP0DN37 164 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 RPS20P60866 119 aaKnown RBP14.68□□□□□ -0.06
SDC2-202ENST00000518385 IGFBPL1Q8WX77 278 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 TET2Q6N021 2002 aaPredicted RBP14.68□□□□□ -0.06
SDC2-202ENST00000518385 TEX50A0A1B0GTY4 177 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 PSMB11A5LHX3 300 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 IGKV1-16P04430 117 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 LIPFP07098 398 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 MGST1P10620 155 aaKnown RBP14.68□□□□□ -0.06
SDC2-202ENST00000518385 CD33P20138 364 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 LGALS7P47929 136 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 UBE2L3P68036 154 aaKnown RBP14.68□□□□□ -0.06
SDC2-202ENST00000518385 CLEC7AQ9BXN2 247 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 SERTAD4Q9NUC0 356 aa14.68□□□□□ -0.06
SDC2-202ENST00000518385 AMMECR1Q9Y4X0 333 aaPredicted RBP14.68□□□□□ -0.06
SDC2-202ENST00000518385 LY6HO94772 140 aa14.67□□□□□ -0.06
SDC2-202ENST00000518385 BATFQ16520 125 aa14.67□□□□□ -0.06
SDC2-202ENST00000518385 ZNF738Q8NE65 137 aa14.67□□□□□ -0.06
SDC2-202ENST00000518385 CHCHD1Q96BP2 118 aaKnown RBP14.67□□□□□ -0.06
SDC2-202ENST00000518385 FAM167A-AS1Q96KT0 104 aa14.67□□□□□ -0.06
SDC2-202ENST00000518385 HARBI1Q96MB7 349 aa14.67□□□□□ -0.06
SDC2-202ENST00000518385 FAM231BA6NCW3 169 aa14.66□□□□□ -0.06
SDC2-202ENST00000518385 SRRM4A7MD48 611 aaKnown RBP14.66□□□□□ -0.06
SDC2-202ENST00000518385 PEX7O00628 323 aa14.66□□□□□ -0.06
SDC2-202ENST00000518385 IGLV1-47P01700 117 aa14.66□□□□□ -0.06
SDC2-202ENST00000518385 TSPOP30536 169 aa14.66□□□□□ -0.06
SDC2-202ENST00000518385 EFNA4P52798 201 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms